Miyakogusa Predicted Gene

Lj0g3v0167649.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0167649.1 tr|G7JD46|G7JD46_MEDTR CONSTANS-like zinc finger
protein OS=Medicago truncatula GN=MTR_4g128930
PE=4,83.64,0.0000000000006,seg,NULL,CUFF.10492.1
         (57 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g128930.1 | zinc finger constans-like protein | HC | chr4:...    50   6e-07

>Medtr4g128930.1 | zinc finger constans-like protein | HC |
           chr4:53656301-53658369 | 20130731
          Length = 375

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 1   MMNHHTEGCFDIDFCRSKLSGSFNYXXXXXXXXXXXXXXXXXXXXXXNAVSDMSY 55
           MMNH++EGCFDIDFCRSKLS SFNY                      N VS++SY
Sbjct: 215 MMNHNSEGCFDIDFCRSKLS-SFNYPSHSISHSVSSSSLDVGVVPDGNTVSEISY 268