Miyakogusa Predicted Gene
- Lj0g3v0167469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0167469.1 Non Characterized Hit- tr|G7IG28|G7IG28_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,73.68,0.0000002, ,CUFF.10480.1
(49 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g036070.1 | hypothetical protein | HC | chr2:15304595-1530... 60 6e-10
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 52 2e-07
>Medtr2g036070.1 | hypothetical protein | HC |
chr2:15304595-15307390 | 20130731
Length = 381
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 2 AAEVAVFADTNLGTRIAFNAPRNITAGALKSKIKDLFF 39
AAEVAVFADTNLGTRIAFNAP +ITAG LK + + F
Sbjct: 5 AAEVAVFADTNLGTRIAFNAPSHITAGTLKRDFEQVHF 42
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 28/38 (73%)
Query: 2 AAEVAVFADTNLGTRIAFNAPRNITAGALKSKIKDLFF 39
AAEVAVFADT+LGT IAFN P +IT GALK + F
Sbjct: 1211 AAEVAVFADTDLGTHIAFNVPPHITTGALKRDFVKVHF 1248