Miyakogusa Predicted Gene

Lj0g3v0167399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0167399.1 tr|Q8W106|Q8W106_ARATH AT3g27930/K24A2_2
OS=Arabidopsis thaliana GN=At3g27930 PE=2
SV=1,58.75,3e-19,seg,NULL,CUFF.10507.1
         (179 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007040.1 | plant/K24A2-2 protein | HC | chr6:1358489-1351...   153   7e-38

>Medtr6g007040.1 | plant/K24A2-2 protein | HC | chr6:1358489-1351115
           | 20130731
          Length = 428

 Score =  153 bits (387), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 68/80 (85%), Positives = 75/80 (93%)

Query: 100 VSGPLDHKPEESITGNALFRWQSDVNDPHTFMDLYVSTSDPILRMRSCAYYPRYGFGAFG 159
           VSGPLD KP+E+I GNALFRWQSDVNDPHTFMDLYVSTSDP+L+MRSCAYYPRYGFGAFG
Sbjct: 87  VSGPLDQKPDENINGNALFRWQSDVNDPHTFMDLYVSTSDPVLQMRSCAYYPRYGFGAFG 146

Query: 160 VFPLLLRKREFSEDYGLMGL 179
           VFPLLL+ RE S+D G+MGL
Sbjct: 147 VFPLLLKNRETSQDSGVMGL 166