Miyakogusa Predicted Gene

Lj0g3v0166889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0166889.1 Non Characterized Hit- tr|I1K9G7|I1K9G7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35614
PE,88.03,0,Nucleotidylyl transferase,NULL; seg,NULL; TRYPTOPHANYL-TRNA
SYNTHETASE,NULL; TRYPTOPHANYL-TRNA SYNTH,CUFF.10449.1
         (397 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110360.1 | tryptophan-tRNA ligase | HC | chr3:51509628-51...   662   0.0  

>Medtr3g110360.1 | tryptophan-tRNA ligase | HC |
           chr3:51509628-51521811 | 20130731
          Length = 396

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/376 (84%), Positives = 336/376 (89%), Gaps = 1/376 (0%)

Query: 21  TLLRSRLRTPSIRCCTTLSATSSETQTPATTSVKKRVVSGVQPTGSVHLGNYLGAIKNWV 80
           TL RSR R P+IRCCTTLS TS  T TP+ TS+KKRVVSGVQPTGS+HLGNY GAIKNWV
Sbjct: 22  TLFRSRFR-PTIRCCTTLSNTSPRTPTPSPTSIKKRVVSGVQPTGSIHLGNYFGAIKNWV 80

Query: 81  ALQHAYDTLFLIVDLHAITLPYDAQQLSKATRSTAAIYLACGVDPSKASVFVQSHVRAHV 140
           ALQH YDTLF IVDLHAITLP+D+QQLSK T+STAAIYLACGVDPSKASVFVQSHVRAHV
Sbjct: 81  ALQHVYDTLFFIVDLHAITLPHDSQQLSKDTKSTAAIYLACGVDPSKASVFVQSHVRAHV 140

Query: 141 ELMWLLSSTAPIGWLNKMIQFKEKSRKAGDEEVGVALLTYPVLMASDILLYQSDLVPVGE 200
           ELMWLLSS  PIGWLN+MIQFKEKSRKAGD+EVGVALLTYPVLMASDILLYQSD VPVGE
Sbjct: 141 ELMWLLSSITPIGWLNRMIQFKEKSRKAGDDEVGVALLTYPVLMASDILLYQSDFVPVGE 200

Query: 201 DQKQHLELTRDLAGRVNNLYXXXXXXXXXXXXXTIFKVPDPLIPPAGARIMSLTDGLSKM 260
           DQKQHLELTRDLA RVNNLY             TIFKVP+PLIPP GARIMSLTDGLSKM
Sbjct: 201 DQKQHLELTRDLAERVNNLYGGRKWKKLGGRGGTIFKVPEPLIPPTGARIMSLTDGLSKM 260

Query: 261 SKSAPSDQSRINILDPKDLIANKIKRCKTDSIPGMEFDNPERPECNNLLSIYQIISGKTK 320
           SKSAPSDQSRINILDPKDLIANKIKRCKTDS P +E DNPERPECNNLLSIYQ+ SGKTK
Sbjct: 261 SKSAPSDQSRINILDPKDLIANKIKRCKTDSFPSLEIDNPERPECNNLLSIYQLASGKTK 320

Query: 321 EEVVQECQNMNWGTFKPLLTDALIDHLQPIQVRYEEIMSDSGYLDEVLAKGARNAAEIAD 380
           EEV  ECQ+MNWGTFKPLLTDALIDHL PIQVRYEE+MSDSGYLD+VL +GA+NAA+IAD
Sbjct: 321 EEVAHECQDMNWGTFKPLLTDALIDHLHPIQVRYEELMSDSGYLDKVLGEGAKNAADIAD 380

Query: 381 ATLQNVYQAMGFLRRQ 396
           ATL NVYQAMGF RRQ
Sbjct: 381 ATLHNVYQAMGFSRRQ 396