Miyakogusa Predicted Gene

Lj0g3v0166019.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0166019.1 Non Characterized Hit- tr|F6HHH5|F6HHH5_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,41.07,0.0002,
,CUFF.10405.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g085155.1 | histidine containing phosphotransfer protein, ...    60   5e-10
Medtr2g086010.1 | histidine containing phosphotransfer protein, ...    55   1e-08

>Medtr2g085155.1 | histidine containing phosphotransfer protein,
           putative | LC | chr2:36154734-36152191 | 20130731
          Length = 175

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 37/55 (67%)

Query: 1   MRLACFDVIAACDERCKSSFSHNLTLLKNEFGYTKRQLSNFVQLERDIIRLEESS 55
           MRLAC + I ACDE  K   S  L  +K+EF  TKR+L  FVQ+ER IIRLE S+
Sbjct: 118 MRLACPEFIKACDEMNKRMLSRTLLWVKHEFANTKRKLEAFVQMERRIIRLERSN 172


>Medtr2g086010.1 | histidine containing phosphotransfer protein,
           putative | HC | chr2:36160457-36157114 | 20130731
          Length = 151

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 36/55 (65%)

Query: 1   MRLACFDVIAACDERCKSSFSHNLTLLKNEFGYTKRQLSNFVQLERDIIRLEESS 55
           MR+AC + + ACDE  K      L  +K++F  TKR+L  FVQ+ER IIRLE S+
Sbjct: 94  MRIACPEFVKACDEMNKIMLDLTLLWVKHQFATTKRKLETFVQMERRIIRLERSN 148