Miyakogusa Predicted Gene

Lj0g3v0164889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164889.1 Non Characterized Hit- tr|A2XTL3|A2XTL3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,43.81,2e-18,seg,NULL; GB DEF: ALPHA-(1,4)-FUCOSYLTRANSFERASE (EC
2.4.1.-) (FT4-M) (GALACTOSIDE 3(4)- L-FUCOSYL,N,CUFF.10319.1
         (187 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g096880.1 | alpha-(1,4)-fucosyltransferase-like protein | ...   206   1e-53

>Medtr1g096880.1 | alpha-(1,4)-fucosyltransferase-like protein | HC
           | chr1:43654973-43651423 | 20130731
          Length = 412

 Score =  206 bits (524), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 100/132 (75%), Positives = 110/132 (83%), Gaps = 2/132 (1%)

Query: 34  PSVSSPLP-PINHSLTPPETGAAAAVPFTDLVAAFRKWDSKVGCARFREKPNGVSLNGSK 92
           PS+S  LP PI+ S T P T  ++  PFTDLV++FRKWDS+VGCA+FREK NGV LN SK
Sbjct: 36  PSISPSLPGPIHDSFTLPSTNTSSK-PFTDLVSSFRKWDSQVGCAKFREKTNGVLLNQSK 94

Query: 93  VVSLQEIGGDSACGGLTMKHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSPVLADKPD 152
           +VSLQE GGD  C G  M HVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKS VLADKPD
Sbjct: 95  IVSLQEFGGDKVCKGFKMNHVSVLVKGWTWIPDNLDNLYSCRCGLSCLWTKSNVLADKPD 154

Query: 153 ALMFESTTPPIQ 164
           ALMFES+TPPIQ
Sbjct: 155 ALMFESSTPPIQ 166