Miyakogusa Predicted Gene

Lj0g3v0164369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164369.1 Non Characterized Hit- tr|I1JB10|I1JB10_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,74.14,1e-18,FAMILY NOT NAMED,NULL; B3,B3 DNA binding domain;
DNA-binding pseudobarrel domain,DNA-binding pseudob,CUFF.10275.1
         (69 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g101520.1 | B3 domain transcription factor | HC | chr3:467...    56   6e-09
Medtr3g101520.4 | B3 domain transcription factor | HC | chr3:467...    56   6e-09
Medtr3g101520.3 | B3 domain transcription factor | HC | chr3:467...    56   7e-09
Medtr3g101520.2 | B3 domain transcription factor | HC | chr3:467...    56   7e-09
Medtr2g102450.2 | B3 DNA-binding domain protein | HC | chr2:4413...    54   4e-08
Medtr2g102450.1 | B3 DNA-binding domain protein | HC | chr2:4413...    54   4e-08
Medtr2g102450.3 | B3 DNA-binding domain protein | HC | chr2:4413...    53   5e-08

>Medtr3g101520.1 | B3 domain transcription factor | HC |
           chr3:46725903-46730052 | 20130731
          Length = 231

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query: 2   GLSGGWRGFSIAHNLLELDVLVFHLIQPHKFKVYIVR 38
           GLS GWRGF+IAHNL++ D L+F L++   FKVYI+R
Sbjct: 187 GLSAGWRGFAIAHNLVDGDALIFELVKRTAFKVYIIR 223


>Medtr3g101520.4 | B3 domain transcription factor | HC |
           chr3:46725903-46730052 | 20130731
          Length = 231

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query: 2   GLSGGWRGFSIAHNLLELDVLVFHLIQPHKFKVYIVR 38
           GLS GWRGF+IAHNL++ D L+F L++   FKVYI+R
Sbjct: 187 GLSAGWRGFAIAHNLVDGDALIFELVKRTAFKVYIIR 223


>Medtr3g101520.3 | B3 domain transcription factor | HC |
           chr3:46725903-46730052 | 20130731
          Length = 223

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query: 2   GLSGGWRGFSIAHNLLELDVLVFHLIQPHKFKVYIVR 38
           GLS GWRGF+IAHNL++ D L+F L++   FKVYI+R
Sbjct: 179 GLSAGWRGFAIAHNLVDGDALIFELVKRTAFKVYIIR 215


>Medtr3g101520.2 | B3 domain transcription factor | HC |
           chr3:46725903-46730052 | 20130731
          Length = 223

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query: 2   GLSGGWRGFSIAHNLLELDVLVFHLIQPHKFKVYIVR 38
           GLS GWRGF+IAHNL++ D L+F L++   FKVYI+R
Sbjct: 179 GLSAGWRGFAIAHNLVDGDALIFELVKRTAFKVYIIR 215


>Medtr2g102450.2 | B3 DNA-binding domain protein | HC |
           chr2:44138351-44133716 | 20130731
          Length = 410

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/38 (57%), Positives = 30/38 (78%)

Query: 2   GLSGGWRGFSIAHNLLELDVLVFHLIQPHKFKVYIVRS 39
           GLSGGWRGF++ H L + D +VF L++  +FKVYIVR+
Sbjct: 195 GLSGGWRGFALEHKLDDGDAVVFELVEAARFKVYIVRA 232


>Medtr2g102450.1 | B3 DNA-binding domain protein | HC |
           chr2:44138609-44133694 | 20130731
          Length = 410

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/38 (57%), Positives = 30/38 (78%)

Query: 2   GLSGGWRGFSIAHNLLELDVLVFHLIQPHKFKVYIVRS 39
           GLSGGWRGF++ H L + D +VF L++  +FKVYIVR+
Sbjct: 195 GLSGGWRGFALEHKLDDGDAVVFELVEAARFKVYIVRA 232


>Medtr2g102450.3 | B3 DNA-binding domain protein | HC |
           chr2:44138609-44133694 | 20130731
          Length = 356

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/38 (57%), Positives = 30/38 (78%)

Query: 2   GLSGGWRGFSIAHNLLELDVLVFHLIQPHKFKVYIVRS 39
           GLSGGWRGF++ H L + D +VF L++  +FKVYIVR+
Sbjct: 141 GLSGGWRGFALEHKLDDGDAVVFELVEAARFKVYIVRA 178