Miyakogusa Predicted Gene
- Lj0g3v0164319.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0164319.1 Non Characterized Hit- tr|I1KTV2|I1KTV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25709
PE,90.16,0,DNA-glycosylase,DNA glycosylase;
Adenine_glyco,Methyladenine glycosylase; SUBFAMILY NOT NAMED,NULL;
,NODE_44168_length_1930_cov_169.880310.path2.1
(122 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g063510.1 | DNA-3-methyladenine glycosylase I | HC | chr2:... 221 9e-59
Medtr8g447000.1 | DNA-3-methyladenine glycosylase I | HC | chr8:... 218 1e-57
Medtr4g130880.1 | DNA-3-methyladenine glycosylase I | HC | chr4:... 142 5e-35
Medtr3g111690.1 | DNA-3-methyladenine glycosylase I | HC | chr3:... 135 8e-33
Medtr4g007070.1 | DNA-3-methyladenine glycosylase I | HC | chr4:... 133 3e-32
Medtr0009s0230.1 | DNA-3-methyladenine glycosylase I | HC | scaf... 132 1e-31
Medtr0009s0230.2 | DNA-3-methyladenine glycosylase I | HC | scaf... 132 1e-31
Medtr8g066040.1 | DNA-3-methyladenine glycosylase I | HC | chr8:... 127 3e-30
Medtr2g063510.2 | DNA-3-methyladenine glycosylase I | HC | chr2:... 58 2e-09
Medtr8g447000.2 | DNA-3-methyladenine glycosylase I | HC | chr8:... 49 1e-06
>Medtr2g063510.1 | DNA-3-methyladenine glycosylase I | HC |
chr2:26805019-26800818 | 20130731
Length = 390
Score = 221 bits (564), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/112 (91%), Positives = 108/112 (96%)
Query: 1 MMSISSEYGIEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPV 60
MMSISSEYGI+ISK+RGVVDNANQIL+V K FGSFDKYIWGFVNHKPIS QYKFGHKIPV
Sbjct: 277 MMSISSEYGIDISKVRGVVDNANQILQVRKGFGSFDKYIWGFVNHKPISNQYKFGHKIPV 336
Query: 61 KTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLAA 112
KTSKSESISKDM++RGFR+VGPTVVHSFMQAAGLTNDHLITCHRHLQCTL A
Sbjct: 337 KTSKSESISKDMIKRGFRYVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLLA 388
>Medtr8g447000.1 | DNA-3-methyladenine glycosylase I | HC |
chr8:18418523-18415122 | 20130731
Length = 383
Score = 218 bits (554), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/110 (90%), Positives = 107/110 (97%)
Query: 1 MMSISSEYGIEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPV 60
M+SIS EYGI+IS++RGVVDNAN+IL+V KDFGSFDKYIWGFVNHKPISTQYKFGHKIPV
Sbjct: 271 MLSISLEYGIDISRVRGVVDNANRILEVNKDFGSFDKYIWGFVNHKPISTQYKFGHKIPV 330
Query: 61 KTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTL 110
KTSKSESISKDM+RRGFRFVGPTVVHSFMQAAGLTNDHLITCH HL+CTL
Sbjct: 331 KTSKSESISKDMIRRGFRFVGPTVVHSFMQAAGLTNDHLITCHSHLKCTL 380
>Medtr4g130880.1 | DNA-3-methyladenine glycosylase I | HC |
chr4:54548746-54544404 | 20130731
Length = 375
Score = 142 bits (359), Expect = 5e-35, Method: Composition-based stats.
Identities = 62/99 (62%), Positives = 81/99 (81%)
Query: 14 KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
K+RG+++NA QI KV+ +FGSFD YIW FVNHKPI +++++ ++PVKT K+E ISKD+V
Sbjct: 239 KLRGIIENARQISKVIVEFGSFDNYIWSFVNHKPILSKFRYPRQVPVKTPKAEVISKDLV 298
Query: 74 RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLAA 112
RRGFR VGPTV++SFMQ GLTNDHLI+C R +C AA
Sbjct: 299 RRGFRGVGPTVIYSFMQVVGLTNDHLISCFRFQECVAAA 337
>Medtr3g111690.1 | DNA-3-methyladenine glycosylase I | HC |
chr3:52235165-52232483 | 20130731
Length = 331
Score = 135 bits (340), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 77/100 (77%)
Query: 14 KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
K+R VV+NA Q LK+ +FGSF Y W FVN+KPI ++++G ++PVK K+E ISKDM+
Sbjct: 220 KLRAVVENAKQFLKIQLEFGSFSNYCWKFVNNKPIKNEFRYGRQVPVKNPKAELISKDMM 279
Query: 74 RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLAAR 113
RRGF+ VGP VV+SFMQ AGL NDHLITC R+ +C +A +
Sbjct: 280 RRGFQCVGPKVVYSFMQVAGLVNDHLITCFRYQECNVAIK 319
>Medtr4g007070.1 | DNA-3-methyladenine glycosylase I | HC |
chr4:935811-930134 | 20130731
Length = 365
Score = 133 bits (335), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 79/98 (80%)
Query: 14 KIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMV 73
++R +++NA Q+ KV+++FGSFD YIW FVN+KPI +Q+++ ++P K+ K+E ISKD+V
Sbjct: 228 RLRSIIENARQMCKVIEEFGSFDSYIWNFVNNKPIVSQFRYPRQVPAKSPKAEFISKDLV 287
Query: 74 RRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLA 111
+RGFR VGPTV+++FMQ AGLTNDHLI C R +C +
Sbjct: 288 KRGFRSVGPTVIYTFMQVAGLTNDHLIGCFRFKECIFS 325
>Medtr0009s0230.1 | DNA-3-methyladenine glycosylase I | HC |
scaffold0009:104042-101934 | 20130731
Length = 308
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Query: 5 SSEYGIEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSK 64
++E + +++ +VDNA ++K+ ++FGSF YIW +VNHKP+ +Y++ +P++T K
Sbjct: 194 ATELVLAECRVKCIVDNAKCMMKIRREFGSFSSYIWSYVNHKPVINKYRYSRDVPLRTPK 253
Query: 65 SESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQC-TLAARP 114
+++ISKD+++RGFR++GP +V+SFMQ AGLT DHL+ C+RH +C LA RP
Sbjct: 254 ADAISKDLLKRGFRYLGPVIVYSFMQVAGLTIDHLVGCYRHKECVNLAERP 304
>Medtr0009s0230.2 | DNA-3-methyladenine glycosylase I | HC |
scaffold0009:104053-101904 | 20130731
Length = 307
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Query: 5 SSEYGIEISKIRGVVDNANQILKVMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSK 64
++E + +++ +VDNA ++K+ ++FGSF YIW +VNHKP+ +Y++ +P++T K
Sbjct: 193 ATELVLAECRVKCIVDNAKCMMKIRREFGSFSSYIWSYVNHKPVINKYRYSRDVPLRTPK 252
Query: 65 SESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQC-TLAARP 114
+++ISKD+++RGFR++GP +V+SFMQ AGLT DHL+ C+RH +C LA RP
Sbjct: 253 ADAISKDLLKRGFRYLGPVIVYSFMQVAGLTIDHLVGCYRHKECVNLAERP 303
>Medtr8g066040.1 | DNA-3-methyladenine glycosylase I | HC |
chr8:27430410-27434638 | 20130731
Length = 329
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 28 VMKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHS 87
V+++ GSF YIW FVNHKPI +YK+ +P+++ K+E++SKDMV+RGFRFVGP +VHS
Sbjct: 238 VVRECGSFSSYIWSFVNHKPIINKYKYPRNVPLRSPKAEALSKDMVKRGFRFVGPVIVHS 297
Query: 88 FMQAAGLTNDHLITCHRHLQC-TLAARP 114
FMQAAGLT DHL+ C+RH +C +LA RP
Sbjct: 298 FMQAAGLTIDHLVDCYRHSECVSLAERP 325
>Medtr2g063510.2 | DNA-3-methyladenine glycosylase I | HC |
chr2:26804984-26802744 | 20130731
Length = 316
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 2/37 (5%)
Query: 1 MMSISSEYGIEISKIRGVVDNANQILKVMKD--FGSF 35
MMSISSEYGI+ISK+RGVVDNANQIL+V K+ F SF
Sbjct: 277 MMSISSEYGIDISKVRGVVDNANQILQVNKNVPFSSF 313
>Medtr8g447000.2 | DNA-3-methyladenine glycosylase I | HC |
chr8:18418617-18415158 | 20130731
Length = 323
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 27/28 (96%)
Query: 1 MMSISSEYGIEISKIRGVVDNANQILKV 28
M+SIS EYGI+IS++RGVVDNAN+IL+V
Sbjct: 271 MLSISLEYGIDISRVRGVVDNANRILEV 298