Miyakogusa Predicted Gene

Lj0g3v0164099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164099.1 Non Characterized Hit- tr|F6GY40|F6GY40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.54,2e-17,HSP20-like chaperones,HSP20-like chaperone;
HSP20,Alpha crystallin/Hsp20 domain; HEAT-SHOCK PROTEIN ,CUFF.10245.1
         (937 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1246s0010.1 | hsp20/alpha crystallin family protein | HC | ...   181   4e-45
Medtr1g098690.1 | hsp20/alpha crystallin family protein | HC | c...   117   6e-26
Medtr6g037200.1 | stretchin-mlck protein | LC | chr6:13080256-13...    70   1e-11

>Medtr1246s0010.1 | hsp20/alpha crystallin family protein | HC |
           scaffold1246:1811-770 | 20130731
          Length = 153

 Score =  181 bits (458), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 86/132 (65%), Positives = 97/132 (73%)

Query: 1   MELALGLKITKTRDDIASISEYQLAKDKGPVFQSRETNTMFILSAYLKGYKRNXXXXXXX 60
           MEL LGLKITKT+DDI SISEY+L KD GP+FQSRETNTMFIL+A+LKGYKR        
Sbjct: 1   MELELGLKITKTKDDIDSISEYKLMKDTGPIFQSRETNTMFILTAHLKGYKRISIDIKIS 60

Query: 61  XXXXXXXXXXXXPIQELLMMGWVMHRKEVKITGFNRVFKIPDGVNLDKIKAKYDEEEWSI 120
                       PIQE++MMGWVM RK V I GFN+VFKIP GVNLDKIK  Y+EEEW +
Sbjct: 61  KDGSKISISGEKPIQEMIMMGWVMQRKVVDIKGFNKVFKIPYGVNLDKIKGNYNEEEWIL 120

Query: 121 NIFMPKLVKGIC 132
           NI+MP  VKGI 
Sbjct: 121 NIYMPNFVKGIF 132


>Medtr1g098690.1 | hsp20/alpha crystallin family protein | HC |
           chr1:44452807-44453935 | 20130731
          Length = 214

 Score =  117 bits (292), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 6/135 (4%)

Query: 1   MELALGLKITKTRDDIASISEYQLAKDK-GPVFQSRETNTMFILSAYLKGYKRNXXXXXX 59
           ME+ LGLKIT+T+DD  SIS++Q AKD+ GP+F S+ET+  F L+A+LKGYK+       
Sbjct: 1   MEVELGLKITRTKDDTTSISDFQFAKDRAGPIFLSKETDATFTLTAHLKGYKKENIDINI 60

Query: 60  XXXXXXXXXXXXXPIQELLMMGWVMHRKEVKITGFNRVFKIPDGVNLDKIKAKYDEEEWS 119
                         +QE+ M+ +   +KE+KI GF + FKIP+GV LDKIKAKY EEE  
Sbjct: 61  NKDGTKISVSGEKEVQEMQMIPF---KKELKIKGFRKKFKIPNGVVLDKIKAKYYEEEEV 117

Query: 120 INIFMPK--LVKGIC 132
           + I MPK  +VKG+ 
Sbjct: 118 LRIVMPKTEIVKGVL 132


>Medtr6g037200.1 | stretchin-mlck protein | LC |
           chr6:13080256-13075219 | 20130731
          Length = 1562

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 2/134 (1%)

Query: 581 LKEAKDVKEEMVKRKGKEIEYFXXXXX-XXXXXXXXXXAKEGKTKEVMLKEIGKSKNGTK 639
           ++E KDV E +VKRKGK+IEY                  K+G      ++E  +S+NG K
Sbjct: 1   MQETKDVMENVVKRKGKKIEYLVEKSEGERLKSKHNIEGKKGNNTRETMQEGEESENGIK 60

Query: 640 DSGKQQVLENTGKGRFDVSNSISEELPKQVAEQDGSKGF-KVANMEELKEVIKEEMAENE 698
           +SG+Q   EN  K + +VS +++EEL   V   +G+ GF  VA  EE KEV+KE + E+E
Sbjct: 61  ESGQQHPKENIVKEKSEVSKNMAEELQHPVENINGNIGFDDVAEEEEQKEVMKEALVESE 120

Query: 699 SSMAKVEGEASKKR 712
           SSM K + E  K+R
Sbjct: 121 SSMEKTQEEEFKER 134