Miyakogusa Predicted Gene

Lj0g3v0163939.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163939.1 Non Characterized Hit- tr|D8RZ39|D8RZ39_SELML
Putative uncharacterized protein OS=Selaginella
moelle,33.04,1e-18,SUBFAMILY NOT NAMED,NULL; RING FINGER
PROTEIN-RELATED,NULL; seg,NULL; coiled-coil,NULL,CUFF.10237.1
         (254 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g046250.2 | E3 ubiquitin-protein ligase BRE1-like protein ...   294   5e-80
Medtr7g046250.1 | E3 ubiquitin-protein ligase BRE1-like protein ...   294   7e-80
Medtr1g068830.1 | E3 ubiquitin-protein ligase BRE1-like protein ...    56   3e-08
Medtr1g068830.2 | E3 ubiquitin-protein ligase BRE1-like protein ...    56   3e-08
Medtr5g085010.1 | E3 ubiquitin-protein ligase BRE1-like protein ...    54   2e-07

>Medtr7g046250.2 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr7:16333806-16352752 | 20130731
          Length = 715

 Score =  294 bits (753), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 164/254 (64%), Positives = 180/254 (70%), Gaps = 4/254 (1%)

Query: 1   MGSMGDSDRKRRHXXXXXXXXXXXXXXXXXXXXXISEDKKLDIAVXXXXXXXXXXXXXXX 60
           MGSMG+ DRKRR                      +SEDKKLDIAV               
Sbjct: 1   MGSMGEHDRKRRFSSLSPTPATAKKLPFLP----VSEDKKLDIAVLQYQNQKLTQKLETQ 56

Query: 61  XXEYAALENKLSQLNESQHSYDSALTVVKKSWEQMVNDLESSSEGTRESSCKSDSRFASV 120
             EYAALENK SQL E Q SYDS L VVKKSWEQ+VNDLES SE  RESS K DSRFAS 
Sbjct: 57  KLEYAALENKFSQLKEKQQSYDSTLAVVKKSWEQLVNDLESCSEHIRESSSKVDSRFASS 116

Query: 121 MNDCSSSTVQDVFLSRLMQTGATESSSTYRFANQMEEHNEITAEKAKSILKNVVTATNNL 180
            +D SSSTVQDVFLSRL+QTGATESSS+Y FAN+ E+H EITAEKAKSIL N+VT+ NN 
Sbjct: 117 TDDGSSSTVQDVFLSRLLQTGATESSSSYHFANETEQHREITAEKAKSILNNIVTSINNF 176

Query: 181 WGMKDGLHTALLKKLPGDVSCRQKLSADLEVEVKNLRLAFSELHLKHKSLASELQFQKDH 240
             +KDG HT LLKKL GDVSC Q LS DLEVE KNLRLA SELHLKHKSLAS+ +  +D 
Sbjct: 177 QCLKDGFHTVLLKKLRGDVSCGQMLSNDLEVESKNLRLALSELHLKHKSLASDFRTHRDL 236

Query: 241 DAKNKADLKRLKGK 254
           DAKNKA+LKRLKG+
Sbjct: 237 DAKNKAELKRLKGE 250


>Medtr7g046250.1 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr7:16333806-16352752 | 20130731
          Length = 877

 Score =  294 bits (752), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 164/254 (64%), Positives = 180/254 (70%), Gaps = 4/254 (1%)

Query: 1   MGSMGDSDRKRRHXXXXXXXXXXXXXXXXXXXXXISEDKKLDIAVXXXXXXXXXXXXXXX 60
           MGSMG+ DRKRR                      +SEDKKLDIAV               
Sbjct: 1   MGSMGEHDRKRRFSSLSPTPATAKKLPFLP----VSEDKKLDIAVLQYQNQKLTQKLETQ 56

Query: 61  XXEYAALENKLSQLNESQHSYDSALTVVKKSWEQMVNDLESSSEGTRESSCKSDSRFASV 120
             EYAALENK SQL E Q SYDS L VVKKSWEQ+VNDLES SE  RESS K DSRFAS 
Sbjct: 57  KLEYAALENKFSQLKEKQQSYDSTLAVVKKSWEQLVNDLESCSEHIRESSSKVDSRFASS 116

Query: 121 MNDCSSSTVQDVFLSRLMQTGATESSSTYRFANQMEEHNEITAEKAKSILKNVVTATNNL 180
            +D SSSTVQDVFLSRL+QTGATESSS+Y FAN+ E+H EITAEKAKSIL N+VT+ NN 
Sbjct: 117 TDDGSSSTVQDVFLSRLLQTGATESSSSYHFANETEQHREITAEKAKSILNNIVTSINNF 176

Query: 181 WGMKDGLHTALLKKLPGDVSCRQKLSADLEVEVKNLRLAFSELHLKHKSLASELQFQKDH 240
             +KDG HT LLKKL GDVSC Q LS DLEVE KNLRLA SELHLKHKSLAS+ +  +D 
Sbjct: 177 QCLKDGFHTVLLKKLRGDVSCGQMLSNDLEVESKNLRLALSELHLKHKSLASDFRTHRDL 236

Query: 241 DAKNKADLKRLKGK 254
           DAKNKA+LKRLKG+
Sbjct: 237 DAKNKAELKRLKGE 250


>Medtr1g068830.1 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr1:29416497-29402918 | 20130731
          Length = 880

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 14/197 (7%)

Query: 67  LENKLSQLNESQHSYDSALTVVKKSWEQMVNDLE--SSSEGTRESSCKSDSRFASVMNDC 124
           LE K  +L E Q+SYD  L  + + W+Q+V+D+       G  + S ++     ++    
Sbjct: 64  LEEKTRELKERQNSYDDILIAINQRWDQLVDDMAFLGIQAGRGKDSLETLDYLDNLQGSL 123

Query: 125 SSSTVQDVFLSRLMQTGATESSSTYRFANQMEEHNEITAEKAKSILKNVV-TATNNLWGM 183
            S    D+ L RL+Q  + E SS     N +EE   +     + +LK +  T  + +  +
Sbjct: 124 PSCHPDDLLLCRLIQKDSIEGSSNDEITNYVEEALALRRLSTRELLKLIQDTVDDQMERI 183

Query: 184 KDGLHTALLKKLPGDVSCRQ------KLSADLEVEVKNLRLAFSELHLKHKSLASELQFQ 237
           +D     + + L GD+S         K+    + E  N R     LH KHK     +Q  
Sbjct: 184 ED-----IGQVLQGDLSTEDVIIQISKIDDMTKKEADNFREVIDTLHAKHKEYTVGIQNY 238

Query: 238 KDHDAKNKADLKRLKGK 254
               +++++D+KRL G+
Sbjct: 239 ITECSQDQSDIKRLTGE 255


>Medtr1g068830.2 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr1:29416388-29402918 | 20130731
          Length = 880

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 14/197 (7%)

Query: 67  LENKLSQLNESQHSYDSALTVVKKSWEQMVNDLE--SSSEGTRESSCKSDSRFASVMNDC 124
           LE K  +L E Q+SYD  L  + + W+Q+V+D+       G  + S ++     ++    
Sbjct: 64  LEEKTRELKERQNSYDDILIAINQRWDQLVDDMAFLGIQAGRGKDSLETLDYLDNLQGSL 123

Query: 125 SSSTVQDVFLSRLMQTGATESSSTYRFANQMEEHNEITAEKAKSILKNVV-TATNNLWGM 183
            S    D+ L RL+Q  + E SS     N +EE   +     + +LK +  T  + +  +
Sbjct: 124 PSCHPDDLLLCRLIQKDSIEGSSNDEITNYVEEALALRRLSTRELLKLIQDTVDDQMERI 183

Query: 184 KDGLHTALLKKLPGDVSCRQ------KLSADLEVEVKNLRLAFSELHLKHKSLASELQFQ 237
           +D     + + L GD+S         K+    + E  N R     LH KHK     +Q  
Sbjct: 184 ED-----IGQVLQGDLSTEDVIIQISKIDDMTKKEADNFREVIDTLHAKHKEYTVGIQNY 238

Query: 238 KDHDAKNKADLKRLKGK 254
               +++++D+KRL G+
Sbjct: 239 ITECSQDQSDIKRLTGE 255


>Medtr5g085010.1 | E3 ubiquitin-protein ligase BRE1-like protein |
           HC | chr5:36680874-36657703 | 20130731
          Length = 880

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 4/192 (2%)

Query: 67  LENKLSQLNESQHSYDSALTVVKKSWEQMVND--LESSSEGTRESSCKSDSRFASVMNDC 124
           LE K  +L E Q+SYD  L  + + W+Q+V+D  L     G  + S K+     +  +  
Sbjct: 64  LEEKTKELKERQNSYDDILIAINQHWDQLVDDMALLGIQAGRGKDSLKTLDYLDNPQDSF 123

Query: 125 SSSTVQDVFLSRLMQTGATESSSTYRFANQMEEHNEITAEKAKSILKNVVTATNNLWGMK 184
            S    D+ L RL+Q  + E  S     N +EE   +     + +LK +    ++     
Sbjct: 124 PSCPPDDLLLCRLIQKDSLEGGSNDEITNYVEEALALRRLSTRELLKLIQDTVDDHMERI 183

Query: 185 DGLHTALLKKLPG-DVSCRQKLSADL-EVEVKNLRLAFSELHLKHKSLASELQFQKDHDA 242
           + +   L + L   DV  +     D+ + E  N R     LH KHK     +Q   D   
Sbjct: 184 ENIGQVLHEDLSTEDVIIKMSKIDDMTKKESNNFREVIDTLHAKHKEYTVGIQNYIDECL 243

Query: 243 KNKADLKRLKGK 254
           ++++D++ L G+
Sbjct: 244 RDQSDIRHLTGE 255