Miyakogusa Predicted Gene
- Lj0g3v0163869.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0163869.1 Non Characterized Hit- tr|I3SKM7|I3SKM7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.68,0,seg,NULL;
LEA_2,Late embryogenesis abundant protein, LEA-14,CUFF.10230.1
(302 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g081930.1 | late embryogenesis abundant protein | HC | chr... 379 e-105
Medtr8g106580.1 | late embryogenesis abundant protein | HC | chr... 360 1e-99
Medtr4g075730.1 | late embryogenesis abundant protein | HC | chr... 189 4e-48
Medtr0154s0010.1 | late embryogenesis abundant protein | HC | sc... 177 2e-44
Medtr2g101870.1 | late embryogenesis abundant protein | HC | chr... 176 4e-44
Medtr6g087880.1 | late embryogenesis abundant protein | HC | chr... 142 4e-34
Medtr3g037650.1 | late embryogenesis abundant protein | LC | chr... 141 9e-34
Medtr8g086610.1 | late embryogenesis abundant protein | LC | chr... 130 1e-30
Medtr4g075730.2 | late embryogenesis abundant protein | HC | chr... 103 1e-22
Medtr3g033530.1 | hypothetical protein | HC | chr3:10750798-1074... 69 4e-12
Medtr7g033535.1 | late embryogenesis abundant hydroxyproline-ric... 52 8e-07
>Medtr6g081930.1 | late embryogenesis abundant protein | HC |
chr6:30580513-30584032 | 20130731
Length = 294
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/304 (67%), Positives = 222/304 (73%), Gaps = 14/304 (4%)
Query: 1 MHAKTDSEVTSIXXXXXXXXXXX---XXLYFVQSPSRDSHDGEKTVTTSFHSTPVLXXXX 57
MH KTDSEVT+ LY+VQSPS HDGEKTVTTSFHSTPV
Sbjct: 1 MHTKTDSEVTTTSVATSTSPTRSPPRRPLYYVQSPS---HDGEKTVTTSFHSTPV----- 52
Query: 58 XXXXXXXXXXXXXXXXKKDNPPHHHSLKPWKQIDVIEEEGLLQGEDRDRTLSRRCYXXXX 117
KKD H HS+ PWK IDVIEEEG L+ E R+ SRRCY
Sbjct: 53 -ASPHHSSSSTHFSASKKDQQ-HQHSVNPWKHIDVIEEEGFLEKE-RNGGYSRRCYFLAF 109
Query: 118 XXXXXXXXXXXXXXXWGASRPMKPKIFIKSIKFDHVQVQAGSDSTGVATDMISMNSTLKF 177
WGASRPMKPKI IKSIKFDHV VQAGSDSTGVATDMI+MNSTLKF
Sbjct: 110 VVGFFVLFSLFSLILWGASRPMKPKIVIKSIKFDHVTVQAGSDSTGVATDMITMNSTLKF 169
Query: 178 TYRNTGTFFGVHVASTPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVMGNKIPLYGSG 237
TYRNTGTFFGVHV++TPLELSYS+IVIA+GNMKEF+Q RRSHRLVSVAVMG+K+PLYGSG
Sbjct: 170 TYRNTGTFFGVHVSATPLELSYSDIVIASGNMKEFHQSRRSHRLVSVAVMGSKVPLYGSG 229
Query: 238 ASLSSTTGMPTVPVPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITLDPKKLSAPIPLKH 297
ASLSSTTGMPT+PVPLNLNFV+RSRA VLG LVK KYYKRIQCSITLDPKKL A + LK+
Sbjct: 230 ASLSSTTGMPTLPVPLNLNFVMRSRANVLGNLVKHKYYKRIQCSITLDPKKLGALVSLKN 289
Query: 298 SCTY 301
SCTY
Sbjct: 290 SCTY 293
>Medtr8g106580.1 | late embryogenesis abundant protein | HC |
chr8:44974833-44973007 | 20130731
Length = 296
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/301 (61%), Positives = 215/301 (71%), Gaps = 6/301 (1%)
Query: 1 MHAKTDSEVTSIXXXXXXXXXXXXXLYFVQSPSRDSHDGEKTVTTSFHSTPVLXXXXXXX 60
MH KTDSEVTS+ Y+VQSPS HDGEKT TTSFHSTPV+
Sbjct: 1 MHTKTDSEVTSLDASSTTRSPRRPA-YYVQSPS---HDGEKT-TTSFHSTPVISPMGSPP 55
Query: 61 XXXXXXXXXXXXXKKDNPPHHHSLKPWKQIDVIEEEGLLQGEDRDRTLSRRCYXXXXXXX 120
K +N H + KPWK+IDVIEEEGLL +D +LSRR Y
Sbjct: 56 HSHSSSSRFSGSRKLNNN-HRSNTKPWKEIDVIEEEGLLNNQDHHHSLSRRWYFLAFILG 114
Query: 121 XXXXXXXXXXXXWGASRPMKPKIFIKSIKFDHVQVQAGSDSTGVATDMISMNSTLKFTYR 180
WGASRPMKP + IKSIKF+HV+VQAGSD+TGVATDMI++N+T+KFTYR
Sbjct: 115 FFLLFTLFSLILWGASRPMKPHVMIKSIKFEHVRVQAGSDATGVATDMITVNATVKFTYR 174
Query: 181 NTGTFFGVHVASTPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVMGNKIPLYGSGASL 240
N GTFFGVHV+STPL+LSYSEIVI GNMK+FYQ RRS RLVSVAVMG+KIPLYGSGASL
Sbjct: 175 NKGTFFGVHVSSTPLDLSYSEIVIGTGNMKKFYQSRRSQRLVSVAVMGSKIPLYGSGASL 234
Query: 241 SSTTGMPTVPVPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITLDPKKLSAPIPLKHSCT 300
SSTTGMPT+PVPL L+F +RSRAYVLGKLVKPKYYK++ CS+ DPKK++ + LK SCT
Sbjct: 235 SSTTGMPTLPVPLKLSFEIRSRAYVLGKLVKPKYYKKVHCSVVFDPKKINVSVSLKKSCT 294
Query: 301 Y 301
Y
Sbjct: 295 Y 295
>Medtr4g075730.1 | late embryogenesis abundant protein | HC |
chr4:28960090-28965957 | 20130731
Length = 318
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 125/172 (72%), Gaps = 2/172 (1%)
Query: 133 WGASRPMKPKIFIKSIKFDHVQVQAGSDSTGVATDMISMNSTLKFTYRNTGTFFGVHVAS 192
WGAS+ KP++ +KSI F+++ VQ+G+D TGV TDM+S+NST++ YRN TFFGVHV S
Sbjct: 147 WGASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVHVTS 206
Query: 193 TPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVMGNKIPLYGSGASL--SSTTGMPTVP 250
TP++LSY ++ +A+G ++EFYQ R+S R ++V V G ++PLYG + L S+T + TV
Sbjct: 207 TPMQLSYYQLRLASGQIQEFYQSRKSQRKLAVVVHGYQVPLYGGVSVLGNSNTEHINTVA 266
Query: 251 VPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITLDPKKLSAPIPLKHSCTYK 302
+P+NL F +RSRAY+LG+LVK +Y RI+CSIT KL + SC YK
Sbjct: 267 LPMNLTFEVRSRAYILGRLVKSTFYHRIRCSITFHGNKLGNHLDFTDSCVYK 318
>Medtr0154s0010.1 | late embryogenesis abundant protein | HC |
scaffold0154:1-1407 | 20130731
Length = 136
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 105/135 (77%)
Query: 168 MISMNSTLKFTYRNTGTFFGVHVASTPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVM 227
M+SMNST+K T+RNT TFFGVHVASTPL+L+Y ++ +A GNM +FYQ R+S R + V V
Sbjct: 1 MVSMNSTVKMTFRNTATFFGVHVASTPLDLNYYQLTLATGNMPKFYQSRKSQRSIKVMVK 60
Query: 228 GNKIPLYGSGASLSSTTGMPTVPVPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITLDPK 287
G+ IPLYG GA L++ G P PVPL LN ++RS+AYVLG LVKPK+ K+I+C++ +DPK
Sbjct: 61 GSHIPLYGGGARLNTVNGSPVEPVPLTLNIMVRSKAYVLGALVKPKFNKKIECALIMDPK 120
Query: 288 KLSAPIPLKHSCTYK 302
K+ PI L + CTY+
Sbjct: 121 KMGKPIRLTNKCTYE 135
>Medtr2g101870.1 | late embryogenesis abundant protein | HC |
chr2:43826956-43829452 | 20130731
Length = 309
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 169/315 (53%), Gaps = 20/315 (6%)
Query: 1 MHAKTDSEVTSIXXXXXXXXXXXXXLYFVQSPSRDSHDGEKTVTTSFHSTPVLXXXXXX- 59
+ AK++S++TS+ +Y+VQSPSRDSHDG+K+ +S +TP+
Sbjct: 2 LSAKSESDITSLAPSSPSRSPKRP-VYYVQSPSRDSHDGDKS--SSMQATPISNSPMESP 58
Query: 60 ----------XXXXXXXXXXXXXXKKDNPPHHHSLKPWKQIDVIEEEGLLQGEDRDRTLS 109
+ K W + VI EEG + E D + +
Sbjct: 59 SHPSFGRHSRNSSASRFSGIFRSSSGRKGSRKRNDKGWPECGVILEEGSYR-EFEDMSFA 117
Query: 110 RRCYXXXXXXXXXXXXXXXXXXXWGASRPMKPKIFIKSIKFDHVQVQAGSDSTGVATDMI 169
RR WGASRP K ++ +KS+ ++ V G+D TGV T ++
Sbjct: 118 RRFQALIAVFTFLVVFTVFCLIIWGASRPFKAEVTVKSLAVHNLYVWEGTDHTGVPTKIL 177
Query: 170 SMNSTLKFTYRNTGTFFGVHVASTPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVMGN 229
++NSTL N TFFG+HV ++P+ L YS+I IA G +K+ YQ R+SHR+VSV + GN
Sbjct: 178 TINSTLHMNIYNPATFFGIHVHTSPINLVYSDISIATGELKKHYQPRKSHRIVSVNLEGN 237
Query: 230 KIPLYGSGASLS-STTGMPTVPVPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITLDPKK 288
KIPLYG+G++++ S TG +V V L L F +RSR V+GKLV+ +++K I C + ++
Sbjct: 238 KIPLYGAGSTITVSQTG--SVEVALVLKFEIRSRGDVVGKLVRTRHHKEITCPLVINSAG 295
Query: 289 LSAPIPL-KHSCTYK 302
+ PI K+SCTY+
Sbjct: 296 -TKPIKFKKNSCTYE 309
>Medtr6g087880.1 | late embryogenesis abundant protein | HC |
chr6:33066104-33069639 | 20130731
Length = 307
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 154/316 (48%), Gaps = 26/316 (8%)
Query: 1 MHAKTDSEVTSIXXXXXXXXXXXXXLYFVQSPSRDS-HDGEKTVT-----------TSFH 48
MH KTDS+VTS Y+VQSPSR+S HDG+K+ T S+
Sbjct: 1 MHIKTDSDVTSFDPSSPRSQKQTP--YYVQSPSRESSHDGDKSSTMQPSPMDSPSHQSYG 58
Query: 49 STPVLXXXXXXXXXXXXXXXXXXXXKKDNPPHHHSLKPWKQIDVIEEEGLLQGEDRDRT- 107
+K N K W VIEEE G+
Sbjct: 59 HHSRASSSSRISGGYNSSFLGRKVNRKVND------KGWIGSKVIEEENGGYGDFDGDGN 112
Query: 108 -LSRRCYXXXXXXXXXXXXXXXXXXXWGASRPMKPKIFIKSIKFDHVQVQAGSDSTGVAT 166
+SRR W AS KP++ +KS+ + GSD TGV T
Sbjct: 113 GVSRRVQFFVAVVGFVLVFSLFCFIIWAASLHYKPQLSVKSLTVHNFYFGEGSDVTGVPT 172
Query: 167 DMISMNSTLKFTYRNTGTFFGVHVASTPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAV 226
M+++N +++ N TFFG++V+S + L YS++ +A G +K+++Q R+S R VSV +
Sbjct: 173 KMLTVNCSMRMLVHNPATFFGIYVSSKSVNLMYSDLTVATGELKKYHQQRKSRRTVSVNI 232
Query: 227 MGNKIPLYGSGASLSSTTGMPTVPVPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITLDP 286
G+K+PLYG+GA ++S+ + + L L F ++SR V+GKLV+ K+ +R+ CSI +DP
Sbjct: 233 QGSKVPLYGAGADVASS--VDNGKISLTLVFEVKSRGNVVGKLVRTKHTQRVSCSIAVDP 290
Query: 287 KKLSAPIPLKHS-CTY 301
+ I LK + C Y
Sbjct: 291 HN-NKYIKLKENECRY 305
>Medtr3g037650.1 | late embryogenesis abundant protein | LC |
chr3:13829626-13832376 | 20130731
Length = 273
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 121/221 (54%), Gaps = 12/221 (5%)
Query: 85 KPWK-QIDVIEEEGLLQGEDRDRTLSRRCYXXXXXXXXXXXXXXXXX----XXWGASRPM 139
+PW+ Q +EE+GL D+ + C+ W SR
Sbjct: 55 RPWRYQSSNVEEKGLGYDNGDDKCICWGCHGISSFCFYFSAVFAAVVIPLLVIWAVSR-Q 113
Query: 140 KPKIFIKSIKFDHVQVQAGSDSTGVATDMISMNSTLKFTYRNTGTFFGVHVASTPLEL-S 198
KP +F++SI FD ++ G D G T M++ NS+LK T+ NT TF G+HV S PLE+ +
Sbjct: 114 KPDLFLESITFDRYSIEEGIDHYGFNTSMVTTNSSLKLTFTNTATFSGIHVTSIPLEMKN 173
Query: 199 YSEIVIAAGNMKEFYQHRRSHRLVSVAVMGNKIPLYGSGASLSSTTGMPTVPVPLNLNFV 258
Y+++ IA GN+ FYQ R+S R + V V G++IP++ ++ + +PL LN +
Sbjct: 174 YNQLPIATGNIPNFYQRRKSARSIDVKVEGSQIPVH-----IAPDDYVLGESIPLTLNMI 228
Query: 259 LRSRAYVLGKLVKPKYYKRIQCSITLDPKKLSAPIPLKHSC 299
+ S+A VL LV K+ I+CS+ +D KK+ PIPL ++C
Sbjct: 229 VNSKANVLWILVTHKFNMNIECSLYMDTKKMGVPIPLTNTC 269
>Medtr8g086610.1 | late embryogenesis abundant protein | LC |
chr8:35948368-35945564 | 20130731
Length = 279
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 4/172 (2%)
Query: 133 WGASRPMKPKIFIKSIKFDHVQVQAGSDSTGVATDMISMNSTLKFTYRNTGTFFGVHVAS 192
W R KP+ +++I F + VQ G+D T V T ++S+NST+ Y N T+FGVHV S
Sbjct: 110 WAVGRSFKPRANLENIVFKKLDVQFGNDRTEVPTYLLSLNSTITMMYTNPATYFGVHVTS 169
Query: 193 TPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVMGNKIPLYGSGASLSSTT--GMPTVP 250
T L+L Y ++ +A+G M+EF+Q +S + + V V +++PLYG + L + T M V
Sbjct: 170 TLLQLRYYDLTLASGQMQEFHQSSKSQQKLVVFVSADQVPLYGGISILGNDTIENMNNVA 229
Query: 251 VPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITLDPKKLSAPIPLKHSCTYK 302
+ +N+ F L+S+A +LG L +Y+ I C IT +L P+ L SC YK
Sbjct: 230 MAMNITFELKSKADILGVL--STFYQTIGCPITFHVNQLGKPLSLIDSCVYK 279
>Medtr4g075730.2 | late embryogenesis abundant protein | HC |
chr4:28960090-28962545 | 20130731
Length = 236
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 133 WGASRPMKPKIFIKSIKFDHVQVQAGSDSTGVATDMISMNSTLKFTYRNTGTFFGVHVAS 192
WGAS+ KP++ +KSI F+++ VQ+G+D TGV TDM+S+NST++ YRN TFFGVHV S
Sbjct: 147 WGASKSYKPRVILKSIVFENLNVQSGNDGTGVPTDMLSLNSTVRILYRNPATFFGVHVTS 206
Query: 193 TPLELSYSEIVIAAGN-MKEFYQHRRS 218
TP++LSY ++ +A+G F+ H+RS
Sbjct: 207 TPMQLSYYQLRLASGQGCTVFFVHKRS 233
>Medtr3g033530.1 | hypothetical protein | HC |
chr3:10750798-10747558 | 20130731
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 135 ASRPMKPKIFIKSIKFDHVQVQAGSDSTGVATDMISMNSTLKFTYRNTGTFFGVHVASTP 194
A++P PKI + + ++ G D TGV T +++ N ++ N FFG+H+
Sbjct: 182 ATKPPTPKISFEIARIPEFKLGEGVDRTGVTTKILTCNCSMNLIVENKSRFFGLHIRPPK 241
Query: 195 LELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVMGNKIPLYGSGAS----LSSTTGMPTVP 250
+++ +S + A N E Y + NK P+YG+G S L S G+P +
Sbjct: 242 MDMKFSILPFAFSNGPELYAESGLTVFPLQLEVKNK-PMYGAGRSMEDMLDSGRGLPIL- 299
Query: 251 VPLNLNFVLRSRAYVLGKLVKPKYYKRIQCSITL 284
+ L S V+ LVKPK++ R++C + L
Sbjct: 300 ----IQVTLSSSFEVVPALVKPKFHHRVECIVVL 329
>Medtr7g033535.1 | late embryogenesis abundant hydroxyproline-rich
glycoprotein, putative | LC | chr7:12132402-12132864 |
20130731
Length = 62
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 179 YRNTGTFFGVHVASTPLELSYSEIVIAAGNMKEFYQHRRSHRLVSVAVMGNKIPL 233
Y N T FGVHV ST L+L Y + A+G M+EF+Q +S R + V + N +PL
Sbjct: 2 YTNPATLFGVHVTSTLLQLRYYD---ASGQMQEFHQSSKSQRKLDVVLFANHVPL 53