Miyakogusa Predicted Gene

Lj0g3v0163679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163679.1 Non Characterized Hit- tr|I3SC69|I3SC69_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,95.02,0,t-snare
proteins,t-SNARE; seg,NULL; SYNTAXIN 5,NULL; SYNTAXIN,NULL; no
description,NULL; Syntaxin,Sy,CUFF.10287.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108160.1 | syntaxin of plants protein | HC | chr3:4998319...   258   3e-69
Medtr3g108160.2 | syntaxin of plants protein | HC | chr3:4998319...   257   5e-69
Medtr5g093600.1 | syntaxin of plants protein | HC | chr5:4087882...   142   2e-34
Medtr5g093600.2 | syntaxin of plants protein | HC | chr5:4087882...   111   6e-25

>Medtr3g108160.1 | syntaxin of plants protein | HC |
           chr3:49983199-49979202 | 20130731
          Length = 336

 Score =  258 bits (658), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 140/205 (68%), Positives = 152/205 (74%), Gaps = 5/205 (2%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKS---GSGPNGPXXXXXXXXXXXXXXXXXX--XXX 55
           M  KS+QSS+RDRTHEF ++ ERLKKS   GS PNG                        
Sbjct: 1   MQFKSSQSSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVA 60

Query: 56  MQSEFNKRASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSA 115
           +QSEFN+RASKIGYGIH                 VFDDPTMEIQELTSVIKQDITALNSA
Sbjct: 61  IQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSA 120

Query: 116 VVDLQLVSNSRNERGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR 175
           VVDLQL+SNSRNE GN S DTTSHS TVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR
Sbjct: 121 VVDLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR 180

Query: 176 RQLFSSSASKESANPFVRQRPLATR 200
           RQLFS++ASK+SANPF+RQRPLAT+
Sbjct: 181 RQLFSANASKDSANPFIRQRPLATK 205


>Medtr3g108160.2 | syntaxin of plants protein | HC |
           chr3:49983199-49979214 | 20130731
          Length = 301

 Score =  257 bits (657), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 140/205 (68%), Positives = 152/205 (74%), Gaps = 5/205 (2%)

Query: 1   MHVKSAQSSYRDRTHEFHSITERLKKS---GSGPNGPXXXXXXXXXXXXXXXXXX--XXX 55
           M  KS+QSS+RDRTHEF ++ ERLKKS   GS PNG                        
Sbjct: 1   MQFKSSQSSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVA 60

Query: 56  MQSEFNKRASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSA 115
           +QSEFN+RASKIGYGIH                 VFDDPTMEIQELTSVIKQDITALNSA
Sbjct: 61  IQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSA 120

Query: 116 VVDLQLVSNSRNERGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR 175
           VVDLQL+SNSRNE GN S DTTSHS TVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR
Sbjct: 121 VVDLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENR 180

Query: 176 RQLFSSSASKESANPFVRQRPLATR 200
           RQLFS++ASK+SANPF+RQRPLAT+
Sbjct: 181 RQLFSANASKDSANPFIRQRPLATK 205


>Medtr5g093600.1 | syntaxin of plants protein | HC |
           chr5:40878820-40872415 | 20130731
          Length = 334

 Score =  142 bits (358), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 105/201 (52%), Gaps = 20/201 (9%)

Query: 8   SSYRDRTHEFHSITERLKK-------SGSGPNGPXXXXXXXXXXXXXXXXXXXXXMQSEF 60
           S+YRDRT EF S+TE LKK       + + PN                        +S+F
Sbjct: 3   STYRDRTSEFRSLTETLKKIGGGGGGATAPPN-------------QQPSTSQISYSRSDF 49

Query: 61  NKRASKIGYGIHXXXXXXXXXXXXXXXXXVFDDPTMEIQELTSVIKQDITALNSAVVDLQ 120
           N++AS+IG GIH                 +F+DP MEIQELT++IK DIT LNSAV+DLQ
Sbjct: 50  NRKASQIGLGIHETSQKIARLAKLAKKSSMFNDPIMEIQELTALIKTDITTLNSAVLDLQ 109

Query: 121 LVSNSRNERGNASADTTSHSFTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFS 180
            +        N S D   HS  V DDLK RLM  TK  +DVLT RTEN+K HENR+Q+FS
Sbjct: 110 NIQKIDLADENYSEDRVVHSNAVCDDLKNRLMGATKHLQDVLTTRTENIKAHENRKQIFS 169

Query: 181 SSASKESANPFVRQRPLATRT 201
            +  +    P     P +  T
Sbjct: 170 KNPLQHQPKPTTEPPPWSNST 190


>Medtr5g093600.2 | syntaxin of plants protein | HC |
           chr5:40878820-40872452 | 20130731
          Length = 268

 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 70/112 (62%)

Query: 90  VFDDPTMEIQELTSVIKQDITALNSAVVDLQLVSNSRNERGNASADTTSHSFTVVDDLKT 149
           +F+DP MEIQELT++IK DIT LNSAV+DLQ +        N S D   HS  V DDLK 
Sbjct: 13  MFNDPIMEIQELTALIKTDITTLNSAVLDLQNIQKIDLADENYSEDRVVHSNAVCDDLKN 72

Query: 150 RLMSTTKEFKDVLTMRTENLKVHENRRQLFSSSASKESANPFVRQRPLATRT 201
           RLM  TK  +DVLT RTEN+K HENR+Q+FS +  +    P     P +  T
Sbjct: 73  RLMGATKHLQDVLTTRTENIKAHENRKQIFSKNPLQHQPKPTTEPPPWSNST 124