Miyakogusa Predicted Gene
- Lj0g3v0163169.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0163169.1 Non Characterized Hit- tr|I1LZ82|I1LZ82_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,94.12,0,no
description,Aspartate decarboxylase-like fold; CDC48_N,CDC48,
N-terminal subdomain; CELL DIVISION,CUFF.10196.1
(120 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g063380.1 | ATPase, AAA-type, CDC48 protein | HC | chr1:27... 240 3e-64
Medtr7g101870.1 | ATPase, AAA-type, CDC48 protein | HC | chr7:41... 238 6e-64
Medtr0041s0130.1 | cell division control-like protein | HC | sca... 237 1e-63
Medtr2g095210.1 | ATPase, AAA-type, CDC48 protein | HC | chr2:40... 209 6e-55
Medtr6g025300.1 | 26S proteasome subunit RPN7 | LC | chr6:868570... 154 1e-38
Medtr2g095320.1 | ATPase, AAA-type, CDC48 protein | HC | chr2:40... 110 2e-25
Medtr2g084935.1 | hypothetical protein | LC | chr2:36048541-3604... 62 1e-10
>Medtr1g063380.1 | ATPase, AAA-type, CDC48 protein | HC |
chr1:27975315-27979980 | 20130731
Length = 810
Score = 240 bits (612), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/120 (95%), Positives = 119/120 (99%)
Query: 1 MANQPESSDSKGTKRDYSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRGD 60
MANQPESSDSKGTKRD+STAILERKK+PNRLVVDEAVNDDNSVVALHP+TMEKLQLFRGD
Sbjct: 1 MANQPESSDSKGTKRDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
Query: 61 TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTICIALAD+TCEEPKIRMNKVVRNNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61 TILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH 120
>Medtr7g101870.1 | ATPase, AAA-type, CDC48 protein | HC |
chr7:41094994-41090557 | 20130731
Length = 809
Score = 238 bits (608), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/121 (96%), Positives = 120/121 (99%), Gaps = 1/121 (0%)
Query: 1 MANQPESSDSKGT-KRDYSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 59
MANQPESSD+KGT KRD+STAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG
Sbjct: 1 MANQPESSDAKGTTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 60
Query: 60 DTILIKGKKRKDTICIALADDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 119
DTILIKGKKRKDTICIALAD+TCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV
Sbjct: 61 DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 120
Query: 120 H 120
H
Sbjct: 121 H 121
>Medtr0041s0130.1 | cell division control-like protein | HC |
scaffold0041:108464-109631 | 20130731
Length = 144
Score = 237 bits (605), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/121 (96%), Positives = 120/121 (99%), Gaps = 1/121 (0%)
Query: 1 MANQPESSDSKGT-KRDYSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 59
MANQPESSD+KGT KRD+STAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG
Sbjct: 1 MANQPESSDAKGTTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 60
Query: 60 DTILIKGKKRKDTICIALADDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 119
DTILIKGKKRKDTICIALAD+TCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV
Sbjct: 61 DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 120
Query: 120 H 120
H
Sbjct: 121 H 121
>Medtr2g095210.1 | ATPase, AAA-type, CDC48 protein | HC |
chr2:40663648-40668479 | 20130731
Length = 734
Score = 209 bits (531), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 102/121 (84%), Positives = 112/121 (92%), Gaps = 3/121 (2%)
Query: 3 NQPESS-DSK--GTKRDYSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 59
+QPESS DSK K+D+STAILERKKAPNRLVVDEAVN DNS+VA+HP+TMEKL LFRG
Sbjct: 2 SQPESSSDSKSGAGKKDFSTAILERKKAPNRLVVDEAVNGDNSIVAMHPQTMEKLGLFRG 61
Query: 60 DTILIKGKKRKDTICIALADDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 119
DTILIKGKKRKD++CIAL DDTCEEP+IRMNKVVR+NLRVRLGDVVSVHQC DVKYGKRV
Sbjct: 62 DTILIKGKKRKDSVCIALGDDTCEEPRIRMNKVVRSNLRVRLGDVVSVHQCTDVKYGKRV 121
Query: 120 H 120
H
Sbjct: 122 H 122
>Medtr6g025300.1 | 26S proteasome subunit RPN7 | LC |
chr6:8685707-8690233 | 20130731
Length = 753
Score = 154 bits (390), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 94/120 (78%), Gaps = 1/120 (0%)
Query: 2 ANQPESSDSKGTKRDYS-TAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRGD 60
ANQP+SSD K + YS T+I E +K +R +V EA+ DDNS VAL+P M++LQ+FRGD
Sbjct: 3 ANQPKSSDVKEKAKGYSITSIDEHRKDSHRFIVQEAIEDDNSFVALNPHVMKELQIFRGD 62
Query: 61 TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKG ++KDTICIAL + CE I MN VVRNNLRV +GD+VSV+QCADV+YGKRVH
Sbjct: 63 TILIKGYEKKDTICIALDHEACEVTAITMNTVVRNNLRVDIGDIVSVYQCADVEYGKRVH 122
>Medtr2g095320.1 | ATPase, AAA-type, CDC48 protein | HC |
chr2:40725675-40721371 | 20130731
Length = 724
Score = 110 bits (276), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 54/56 (96%)
Query: 65 KGKKRKDTICIALADDTCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVH 120
+GKKRKD++CIAL DDTCEEP+IRMNKVVR+NLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 13 EGKKRKDSVCIALGDDTCEEPRIRMNKVVRSNLRVRLGDVVSVHQCTDVKYGKRVH 68
>Medtr2g084935.1 | hypothetical protein | LC |
chr2:36048541-36045906 | 20130731
Length = 115
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 12 GTKRDYSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRGDTILI 64
GTK+D++ ILE KKA N LVVDE VN++ V+ LHP+ MEKLQL DT I
Sbjct: 17 GTKKDFTKVILEHKKALNCLVVDEVVNENYPVIELHPKIMEKLQLSFDDTFQI 69