Miyakogusa Predicted Gene

Lj0g3v0163059.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163059.1 tr|A9RAW2|A9RAW2_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,40.6,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.10862.1
         (209 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g073530.1 | senescence/dehydration-associated-like protein...   213   1e-55
Medtr4g073530.2 | senescence/dehydration-associated-like protein...   212   2e-55
Medtr8g075350.1 | senescence/dehydration-associated-like protein...   139   2e-33
Medtr5g022450.1 | senescence/dehydration-associated-like protein...   122   2e-28
Medtr5g022450.2 | senescence/dehydration-associated-like protein...   122   2e-28
Medtr8g102510.3 | senescence/dehydration-associated-like protein...    69   4e-12
Medtr8g102510.2 | senescence/dehydration-associated-like protein...    69   4e-12
Medtr8g102510.1 | senescence/dehydration-associated-like protein...    69   4e-12
Medtr6g088680.2 | senescence/dehydration-associated-like protein...    65   4e-11
Medtr6g088680.1 | senescence/dehydration-associated-like protein...    65   4e-11
Medtr6g088685.1 | senescence/dehydration-associated-like protein...    65   5e-11

>Medtr4g073530.1 | senescence/dehydration-associated-like protein |
           HC | chr4:27879029-27877517 | 20130731
          Length = 404

 Score =  213 bits (541), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/196 (62%), Positives = 144/196 (73%), Gaps = 13/196 (6%)

Query: 7   SLYPQVHSTNPDANSPFFHASTSSSMYPSVGNP--------TTAQQPSEHVLVTVPGVIL 58
           S YPQV STNPDANSPF H+S+SS+MYPS+           TT  Q SEHVLVTVP VIL
Sbjct: 6   SFYPQVESTNPDANSPFSHSSSSSTMYPSITTNNLSSEYQNTTQTQASEHVLVTVPNVIL 65

Query: 59  HLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTI 118
           HLIEKDSSVHLASGDL I+SL E ++VV VLA +GDQ+QWPLAKDVS VKLD+SHYFFT+
Sbjct: 66  HLIEKDSSVHLASGDLTIVSLKEEEKVVAVLARIGDQIQWPLAKDVSTVKLDESHYFFTL 125

Query: 119 RVPKEGGEFEVLNYGVTVAAEGRGRG-KELDEVLEKYCFLSVEKVEGLGNWAVLKSEEKG 177
           ++P+   + EVLNYG+TVAA+G  +  K+LDEVLEKY  LSVEKV+G+  W VL  E+K 
Sbjct: 126 KLPQ--SDDEVLNYGLTVAAKGSKKVLKKLDEVLEKYSLLSVEKVKGVKGWEVL--EKKE 181

Query: 178 VAGEEENAGCWLHRPP 193
              E   A  W    P
Sbjct: 182 DVEENSAAAYWTTLAP 197


>Medtr4g073530.2 | senescence/dehydration-associated-like protein |
           HC | chr4:27879062-27877766 | 20130731
          Length = 349

 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/196 (62%), Positives = 144/196 (73%), Gaps = 13/196 (6%)

Query: 7   SLYPQVHSTNPDANSPFFHASTSSSMYPSVGNP--------TTAQQPSEHVLVTVPGVIL 58
           S YPQV STNPDANSPF H+S+SS+MYPS+           TT  Q SEHVLVTVP VIL
Sbjct: 9   SFYPQVESTNPDANSPFSHSSSSSTMYPSITTNNLSSEYQNTTQTQASEHVLVTVPNVIL 68

Query: 59  HLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTI 118
           HLIEKDSSVHLASGDL I+SL E ++VV VLA +GDQ+QWPLAKDVS VKLD+SHYFFT+
Sbjct: 69  HLIEKDSSVHLASGDLTIVSLKEEEKVVAVLARIGDQIQWPLAKDVSTVKLDESHYFFTL 128

Query: 119 RVPKEGGEFEVLNYGVTVAAEGRGRG-KELDEVLEKYCFLSVEKVEGLGNWAVLKSEEKG 177
           ++P+   + EVLNYG+TVAA+G  +  K+LDEVLEKY  LSVEKV+G+  W VL  E+K 
Sbjct: 129 KLPQ--SDDEVLNYGLTVAAKGSKKVLKKLDEVLEKYSLLSVEKVKGVKGWEVL--EKKE 184

Query: 178 VAGEEENAGCWLHRPP 193
              E   A  W    P
Sbjct: 185 DVEENSAAAYWTTLAP 200


>Medtr8g075350.1 | senescence/dehydration-associated-like protein |
           HC | chr8:31871181-31867632 | 20130731
          Length = 477

 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 115/201 (57%), Gaps = 45/201 (22%)

Query: 7   SLYPQVHSTNPDANSPFF---HASTSSSMYPSV-------------GNPTTAQQPSEHVL 50
           SLYPQ+  +NP+A+SPF    + +TSSS+YPS+               P+  Q  +E +L
Sbjct: 20  SLYPQIIDSNPEASSPFISNPNTTTSSSLYPSIEVSDLVEDLFHENTAPSAPQIAAEDIL 79

Query: 51  VTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLD 110
           + +PG ILHLI++  S  LA  DL II L +G+  V V A VG+++QWPLAKD +AVK+D
Sbjct: 80  IKIPGAILHLIDQQYSFELAISDLTIIRLRQGNNTVAVYARVGNEIQWPLAKDEAAVKVD 139

Query: 111 DSHYFFTIRVP----------------------------KEGGEFEVLNYGVTVAAEGR- 141
           +SHYFF  RVP                            KE    ++L+YG+T+A++G+ 
Sbjct: 140 ESHYFFCFRVPKEKNDSDSDSSDEEKEKSKLSFRRKGRRKEEDNSDLLSYGLTIASKGQE 199

Query: 142 GRGKELDEVLEKYCFLSVEKV 162
              KELDEVL++    SV++V
Sbjct: 200 DLVKELDEVLKECSNFSVQEV 220


>Medtr5g022450.1 | senescence/dehydration-associated-like protein |
           HC | chr5:8850707-8856565 | 20130731
          Length = 460

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 45/199 (22%)

Query: 4   PHQ--SLYPQVHSTNPDANSPFFHASTSSSMYPSVG-----------------------N 38
           P+Q  SLYPQV S+ P A       S+ S++YPS+                        +
Sbjct: 6   PNQRNSLYPQVISSIPTA-----PPSSQSNLYPSIDHDFDDLVENLFPDTTTTAGVNTTS 60

Query: 39  PTTAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQW 98
           P+   + +E +L+ +PG IL+LI++  SV LASGD  ++ L +G+  + V A + D++QW
Sbjct: 61  PSAPPETTEQILIKIPGAILNLIDQQYSVELASGDFTVVRLRQGENSIAVYARIADEIQW 120

Query: 99  PLAKDVSAVKLDDSHYFFTIRVPK--------------EGGEFEVLNYGVTVAAEGRGR- 143
           PLAKD +AVK+DDSHYFF+   PK                 E ++L+YG+T+A++G+   
Sbjct: 121 PLAKDETAVKVDDSHYFFSFSAPKGYDSDEDEADRSKNSKTESDLLSYGLTIASKGQEHL 180

Query: 144 GKELDEVLEKYCFLSVEKV 162
            KELD +LE     SV+KV
Sbjct: 181 LKELDVILENCSNFSVQKV 199


>Medtr5g022450.2 | senescence/dehydration-associated-like protein |
           HC | chr5:8850707-8856565 | 20130731
          Length = 454

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 45/199 (22%)

Query: 4   PHQ--SLYPQVHSTNPDANSPFFHASTSSSMYPSVG-----------------------N 38
           P+Q  SLYPQV S+ P A       S+ S++YPS+                        +
Sbjct: 6   PNQRNSLYPQVISSIPTA-----PPSSQSNLYPSIDHDFDDLVENLFPDTTTTAGVNTTS 60

Query: 39  PTTAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQW 98
           P+   + +E +L+ +PG IL+LI++  SV LASGD  ++ L +G+  + V A + D++QW
Sbjct: 61  PSAPPETTEQILIKIPGAILNLIDQQYSVELASGDFTVVRLRQGENSIAVYARIADEIQW 120

Query: 99  PLAKDVSAVKLDDSHYFFTIRVPK--------------EGGEFEVLNYGVTVAAEGRGR- 143
           PLAKD +AVK+DDSHYFF+   PK                 E ++L+YG+T+A++G+   
Sbjct: 121 PLAKDETAVKVDDSHYFFSFSAPKGYDSDEDEADRSKNSKTESDLLSYGLTIASKGQEHL 180

Query: 144 GKELDEVLEKYCFLSVEKV 162
            KELD +LE     SV+KV
Sbjct: 181 LKELDVILENCSNFSVQKV 199


>Medtr8g102510.3 | senescence/dehydration-associated-like protein |
           HC | chr8:43159649-43161021 | 20130731
          Length = 294

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 12/144 (8%)

Query: 21  SPFFHAST-SSSMYPSVGNPTTAQQPSEH------VLVTVPGVILHLIEKDSSVHLASGD 73
           S  FH ST    M  S+   +T +  + H      VL+ +P   +HL+++  +  LA G 
Sbjct: 2   SCCFHGSTVMQPMETSIPRSSTIEDYAGHKNLRQEVLIQIPRCKVHLMDEGEAFELAQGH 61

Query: 74  LNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYG 133
             +I  +E +  +  +  V + +QWPL KD   VKLD  HY F++ V K+G   E L+YG
Sbjct: 62  FMVIKTLEENVSLATVIKVEEDLQWPLTKDEPVVKLDALHYLFSLPV-KDG---EPLSYG 117

Query: 134 VTVAAEGRGRGKELDEVLEKY-CF 156
           +T + +  G    LD  L+++ CF
Sbjct: 118 LTFSEDSYGSLSLLDSFLKEHSCF 141


>Medtr8g102510.2 | senescence/dehydration-associated-like protein |
           HC | chr8:43159649-43161393 | 20130731
          Length = 321

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 12/144 (8%)

Query: 21  SPFFHAST-SSSMYPSVGNPTTAQQPSEH------VLVTVPGVILHLIEKDSSVHLASGD 73
           S  FH ST    M  S+   +T +  + H      VL+ +P   +HL+++  +  LA G 
Sbjct: 2   SCCFHGSTVMQPMETSIPRSSTIEDYAGHKNLRQEVLIQIPRCKVHLMDEGEAFELAQGH 61

Query: 74  LNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYG 133
             +I  +E +  +  +  V + +QWPL KD   VKLD  HY F++ V K+G   E L+YG
Sbjct: 62  FMVIKTLEENVSLATVIKVEEDLQWPLTKDEPVVKLDALHYLFSLPV-KDG---EPLSYG 117

Query: 134 VTVAAEGRGRGKELDEVLEKY-CF 156
           +T + +  G    LD  L+++ CF
Sbjct: 118 LTFSEDSYGSLSLLDSFLKEHSCF 141


>Medtr8g102510.1 | senescence/dehydration-associated-like protein |
           HC | chr8:43159649-43161852 | 20130731
          Length = 375

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 12/144 (8%)

Query: 21  SPFFHAST-SSSMYPSVGNPTTAQQPSEH------VLVTVPGVILHLIEKDSSVHLASGD 73
           S  FH ST    M  S+   +T +  + H      VL+ +P   +HL+++  +  LA G 
Sbjct: 2   SCCFHGSTVMQPMETSIPRSSTIEDYAGHKNLRQEVLIQIPRCKVHLMDEGEAFELAQGH 61

Query: 74  LNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYG 133
             +I  +E +  +  +  V + +QWPL KD   VKLD  HY F++ V K+G   E L+YG
Sbjct: 62  FMVIKTLEENVSLATVIKVEEDLQWPLTKDEPVVKLDALHYLFSLPV-KDG---EPLSYG 117

Query: 134 VTVAAEGRGRGKELDEVLEKY-CF 156
           +T + +  G    LD  L+++ CF
Sbjct: 118 LTFSEDSYGSLSLLDSFLKEHSCF 141


>Medtr6g088680.2 | senescence/dehydration-associated-like protein |
           HC | chr6:33818763-33815362 | 20130731
          Length = 295

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 12/132 (9%)

Query: 26  ASTSSSMYPSVGNPTTAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRV 85
           AST+SS       P T +Q    +L+ +PG  ++L+++  +  L  G   II +++ +  
Sbjct: 19  ASTNSST-----KPKTLRQ---EILIQIPGCRVYLMDEGEAHELTQGQFMIIKIVDENVS 70

Query: 86  VTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGK 145
           +  +  +G+ VQ+PL KD   VK+D  HY F++ V K+G   E L+YGVT   E  G   
Sbjct: 71  LATIIKIGNNVQFPLTKDEPVVKVDSLHYLFSLPV-KDG--HEPLSYGVTFPHEFSGSMA 127

Query: 146 ELDEVLEKY-CF 156
            ++  L+++ CF
Sbjct: 128 LVESFLKEHSCF 139


>Medtr6g088680.1 | senescence/dehydration-associated-like protein |
           HC | chr6:33818763-33815362 | 20130731
          Length = 374

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 12/132 (9%)

Query: 26  ASTSSSMYPSVGNPTTAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRV 85
           AST+SS       P T +Q    +L+ +PG  ++L+++  +  L  G   II +++ +  
Sbjct: 19  ASTNSST-----KPKTLRQ---EILIQIPGCRVYLMDEGEAHELTQGQFMIIKIVDENVS 70

Query: 86  VTVLASVGDQVQWPLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGK 145
           +  +  +G+ VQ+PL KD   VK+D  HY F++ V K+G   E L+YGVT   E  G   
Sbjct: 71  LATIIKIGNNVQFPLTKDEPVVKVDSLHYLFSLPV-KDG--HEPLSYGVTFPHEFSGSMA 127

Query: 146 ELDEVLEKY-CF 156
            ++  L+++ CF
Sbjct: 128 LVESFLKEHSCF 139


>Medtr6g088685.1 | senescence/dehydration-associated-like protein,
           putative | LC | chr6:33823960-33822045 | 20130731
          Length = 218

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 4/115 (3%)

Query: 47  EHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSA 106
           E +L+ +P   ++L  ++ +  L+ G   II ++  +  +  +  +G+ VQ+PL KD   
Sbjct: 27  EEILIQIPECKVYLKNEEEAHELSQGQFTIIKIVNENVSLATIIKIGNNVQFPLTKDEPI 86

Query: 107 VKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGKELDEVLEKY-CFLSVE 160
           VK+D  HY F++ V K+G   E L+YGVT   E  G    L+  L +Y CF  +E
Sbjct: 87  VKVDSLHYLFSLPV-KDG--HEPLSYGVTFPHEFSGSMDLLNSFLNEYSCFSGLE 138