Miyakogusa Predicted Gene

Lj0g3v0162719.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0162719.1 Non Characterized Hit- tr|B5TV75|B5TV75_CAMSI
Putative uncharacterized protein OS=Camellia sinensis
,46.03,1e-16,seg,NULL,CUFF.10129.1
         (147 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g028805.1 | transmembrane protein, putative | HC | chr7:99...    74   4e-14

>Medtr7g028805.1 | transmembrane protein, putative | HC |
           chr7:9930700-9931125 | 20130731
          Length = 141

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 61/133 (45%), Gaps = 8/133 (6%)

Query: 5   MRQQEEAEDNQSRVLYELCSMIIHTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKRQQ 64
           M  Q E +D QS+VLYELCSMIIHTLK                              ++Q
Sbjct: 1   MIHQNE-DDQQSKVLYELCSMIIHTLKFPLPSPRYSTQHPYSSTSIASSSSSS--SSKRQ 57

Query: 65  PWWWTSFT-----SPASFATLFLGISFSLMLLGSVIFXXXXXXXXXXXXXXXXXXXXXXX 119
           PWW T+ +     SPA+FA+LF GI  +LML GSV F                       
Sbjct: 58  PWWTTTLSTSPKDSPAAFASLFFGICVALMLFGSVTFLIGLLLLPWITLLVLVFYVAAFV 117

Query: 120 SNLFLLVRFILGS 132
           SNL LL RFI+GS
Sbjct: 118 SNLSLLGRFIVGS 130