Miyakogusa Predicted Gene

Lj0g3v0162639.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0162639.1 Non Characterized Hit- tr|H3IIH4|H3IIH4_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,39.81,7e-19,FAMILY NOT NAMED,NULL,CUFF.10122.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g087980.1 | bacterial long-chain fatty acid CoA synthetase...   194   2e-50
Medtr1g030290.1 | long-chain fatty acyl CoA ligase, putative | H...   183   3e-47
Medtr3g082660.1 | bacterial long-chain fatty acid CoA synthetase...   138   1e-33
Medtr4g068670.1 | long-chain fatty acyl CoA ligase | HC | chr4:2...    58   2e-09
Medtr1g034360.1 | long-chain fatty acyl CoA ligase | HC | chr1:1...    55   2e-08
Medtr1g104810.1 | long chain acyl-CoA synthetase 7, peroxisomal ...    54   2e-08
Medtr1g104810.2 | long chain acyl-CoA synthetase 7, peroxisomal ...    54   2e-08
Medtr7g109830.1 | long-chain fatty acyl CoA ligase | HC | chr7:4...    54   3e-08
Medtr1g086600.1 | long-chain fatty acyl CoA ligase | HC | chr1:3...    52   8e-08
Medtr5g009350.1 | long-chain fatty acyl CoA ligase | HC | chr5:2...    52   1e-07
Medtr5g009360.1 | long-chain fatty acyl CoA ligase | HC | chr5:2...    51   2e-07
Medtr5g009360.2 | long-chain fatty acyl CoA ligase | HC | chr5:2...    51   2e-07
Medtr5g009350.3 | long-chain fatty acyl CoA ligase | HC | chr5:2...    50   6e-07
Medtr8g099420.1 | long-chain fatty acyl CoA ligase | HC | chr8:4...    46   8e-06

>Medtr3g087980.1 | bacterial long-chain fatty acid CoA synthetase |
           HC | chr3:39878065-39887996 | 20130731
          Length = 694

 Score =  194 bits (493), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 91/109 (83%), Positives = 100/109 (91%)

Query: 1   MVHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKA 60
           M+HAD F SYCV LVAV HP L++W SK GIAYSD SELCSK+ETVKEVHASLVKEAKK 
Sbjct: 585 MLHADSFQSYCVGLVAVSHPALDEWASKQGIAYSDLSELCSKEETVKEVHASLVKEAKKG 644

Query: 61  RLEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLYA 109
           RLEKFEIPAK+K+LSDPWTPETGLVTAALK+KRDIIRKTFQE+L+KLYA
Sbjct: 645 RLEKFEIPAKLKLLSDPWTPETGLVTAALKIKRDIIRKTFQEELSKLYA 693


>Medtr1g030290.1 | long-chain fatty acyl CoA ligase, putative | HC |
           chr1:10519137-10511920 | 20130731
          Length = 696

 Score =  183 bits (465), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/109 (78%), Positives = 95/109 (87%)

Query: 1   MVHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKA 60
           M+HADPFHSYCVALV      LE+W S  GI YS FSELCSK+E++KEVHASLVKEAKK 
Sbjct: 587 MLHADPFHSYCVALVVASQSTLEEWASNQGIPYSGFSELCSKEESIKEVHASLVKEAKKV 646

Query: 61  RLEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLYA 109
           RLEKFEIPAKIK+LSDPWTPE+GLVTAALKLKR+ +RKTFQEDL KLYA
Sbjct: 647 RLEKFEIPAKIKLLSDPWTPESGLVTAALKLKREAVRKTFQEDLLKLYA 695


>Medtr3g082660.1 | bacterial long-chain fatty acid CoA synthetase |
           HC | chr3:37295539-37302320 | 20130731
          Length = 727

 Score =  138 bits (347), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/109 (63%), Positives = 83/109 (76%)

Query: 1   MVHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKA 60
           MVHADPFHSYCVALV   H  LE W  + GI Y DF +LC+K E V EV  S+ K AK A
Sbjct: 619 MVHADPFHSYCVALVVASHQSLEKWAQETGIEYKDFPDLCNKPEAVTEVLQSISKAAKAA 678

Query: 61  RLEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLYA 109
           +L+K E+PAKIK+L+DPWTPE+GLVTAALKLKR+ ++  F +DL KLYA
Sbjct: 679 KLQKTEVPAKIKLLADPWTPESGLVTAALKLKREQLKAKFNDDLQKLYA 727


>Medtr4g068670.1 | long-chain fatty acyl CoA ligase | HC |
           chr4:25750814-25745620 | 20130731
          Length = 659

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F S+ VA+V      LEDW +KH ++  DF  LC   +  K +   L    +K +
Sbjct: 546 VYGNSFESFLVAVVIPERQALEDWAAKHELS-DDFKSLCGNPKARKYILDELNITGQKHQ 604

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L  FE+   + +   P+  E  L+T   KLKR  + K +++ + +LY
Sbjct: 605 LRGFELVKAVHLEPVPFDVERDLITPTFKLKRPQLLKHYKDCIDQLY 651


>Medtr1g034360.1 | long-chain fatty acyl CoA ligase | HC |
           chr1:12520398-12515364 | 20130731
          Length = 661

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F S+ VA+V      LEDW  +H     DF  +C   +  + +   L    +K +
Sbjct: 548 VYGNSFESFLVAVVVPERKALEDWAVEHNFT-GDFQSVCENLKARQYILDELKSTGQKLQ 606

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L  FE    I +   P+  E  LVT   KLKR  + K +++ + +LY
Sbjct: 607 LRGFEQLKAIYLEPSPFDIERDLVTPTFKLKRPQLLKYYKDQIDELY 653


>Medtr1g104810.1 | long chain acyl-CoA synthetase 7, peroxisomal
           protein | HC | chr1:47232054-47222519 | 20130731
          Length = 697

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 61/108 (56%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           ++ D F+S  V++V+V    ++ W +   I Y+D ++LC+       V A +    ++A+
Sbjct: 578 IYGDSFNSSLVSVVSVDPDVMKAWAASQNIVYNDLTQLCNDPRAKAAVLAEMDAVGREAQ 637

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLYA 109
           L  FE    + ++++P+  E GL+T  +K+KR   ++ F + ++ +Y+
Sbjct: 638 LRGFEFAKAVFLVAEPFAMENGLLTPTMKIKRPQAKEYFGKAISDMYS 685


>Medtr1g104810.2 | long chain acyl-CoA synthetase 7, peroxisomal
           protein | HC | chr1:47232001-47222666 | 20130731
          Length = 630

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 61/108 (56%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           ++ D F+S  V++V+V    ++ W +   I Y+D ++LC+       V A +    ++A+
Sbjct: 511 IYGDSFNSSLVSVVSVDPDVMKAWAASQNIVYNDLTQLCNDPRAKAAVLAEMDAVGREAQ 570

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLYA 109
           L  FE    + ++++P+  E GL+T  +K+KR   ++ F + ++ +Y+
Sbjct: 571 LRGFEFAKAVFLVAEPFAMENGLLTPTMKIKRPQAKEYFGKAISDMYS 618


>Medtr7g109830.1 | long-chain fatty acyl CoA ligase | HC |
           chr7:45000384-44994691 | 20130731
          Length = 662

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F S  VA+V  +    + W   +G   S FSELCS DE  K V + L   A++ +
Sbjct: 547 VYGNSFKSVLVAVVVPNEEITKKWAYTNGFVGS-FSELCSLDEFKKYVLSELKLTAERNK 605

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L+ FE    + +   P+  E  LVTA LK +R+ + K +Q ++ ++Y
Sbjct: 606 LKGFEQIKGVILDPHPFDMERDLVTATLKKRRNNMLKYYQVEIDEVY 652


>Medtr1g086600.1 | long-chain fatty acyl CoA ligase | HC |
           chr1:38763334-38769641 | 20130731
          Length = 686

 Score = 52.4 bits (124), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F S  VA+V  +      W   +G   S FS+LCS D+  K V + L   A + +
Sbjct: 571 VYGNSFKSMLVAVVVPNEDVTNKWAYANG-HISSFSKLCSLDQLKKYVLSELKSTAVRNK 629

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L+ FE    + +   P+  E  LVTA LK KR+ + K ++ D+ +LY
Sbjct: 630 LKGFEHIKGVILDPLPFDMERDLVTATLKKKRNNMLKYYKVDIDELY 676


>Medtr5g009350.1 | long-chain fatty acyl CoA ligase | HC |
           chr5:2198023-2208158 | 20130731
          Length = 662

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F ++ VA+V    P LE W  ++GI+  DF+ LC        +   L K  K+ +
Sbjct: 549 VYGNSFEAFLVAVVNPSKPALEHWAEENGISV-DFNSLCGDSRAKGYILDELSKIGKEKK 607

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L+ FE    + +   P+  E  L+T   K KR  + K +Q  +  +Y
Sbjct: 608 LKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVIDDMY 654


>Medtr5g009360.1 | long-chain fatty acyl CoA ligase | HC |
           chr5:2210305-2220481 | 20130731
          Length = 662

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F ++ V +V    P LE W  ++GI+  DF+ LC        +   L K  K+ +
Sbjct: 549 VYGNSFEAFLVTVVTPSKPALEHWAEENGISM-DFNSLCGDSRAKSYILEELSKIGKEKK 607

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L+ FE    + +   P+  E  L+T   K KR  + K +Q  +  +Y
Sbjct: 608 LKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVIDDMY 654


>Medtr5g009360.2 | long-chain fatty acyl CoA ligase | HC |
           chr5:2214239-2220481 | 20130731
          Length = 536

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F ++ V +V    P LE W  ++GI+  DF+ LC        +   L K  K+ +
Sbjct: 423 VYGNSFEAFLVTVVTPSKPALEHWAEENGISM-DFNSLCGDSRAKSYILEELSKIGKEKK 481

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L+ FE    + +   P+  E  L+T   K KR  + K +Q  +  +Y
Sbjct: 482 LKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVIDDMY 528


>Medtr5g009350.3 | long-chain fatty acyl CoA ligase | HC |
           chr5:2198071-2208152 | 20130731
          Length = 648

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           V+ + F ++ VA+V    P LE W  ++GI+  DF+ LC        +   L K  K+ +
Sbjct: 549 VYGNSFEAFLVAVVNPSKPALEHWAEENGISV-DFNSLCGDSRAKGYILDELSKIGKEKK 607

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQ 101
           L+ FE    + +   P+  E  L+T   K KR  + K +Q
Sbjct: 608 LKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQ 647


>Medtr8g099420.1 | long-chain fatty acyl CoA ligase | HC |
           chr8:41934664-41928167 | 20130731
          Length = 659

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)

Query: 2   VHADPFHSYCVALVAVHHPKLEDWVSKHGIAYSDFSELCSKDETVKEVHASLVKEAKKAR 61
           ++ + F  + VA+V      +EDW   + +   DF+ LC   +    +   L+K AK+ +
Sbjct: 550 IYGNSFEHFLVAVVNPSKKAVEDWAQANDMKM-DFNSLCEDSKAKHYILGELLKIAKEKK 608

Query: 62  LEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLY 108
           L+ FE    + +   P+  E  L+T   K KR  + K +Q  + ++Y
Sbjct: 609 LKGFEFVKAVHLDPVPFDMERDLLTPTFKKKRPQLLKYYQNIIDEMY 655