Miyakogusa Predicted Gene

Lj0g3v0162189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0162189.1 tr|A9T521|A9T521_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88177
,26.14,0.000000000002,seg,NULL,CUFF.10091.1
         (322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g073480.1 | hypothetical protein | HC | chr3:33138549-3313...   533   e-152
Medtr5g060880.1 | hypothetical protein | HC | chr5:25323771-2532...   389   e-108
Medtr8g088750.1 | DUF793 family protein | HC | chr8:36867521-368...   325   5e-89
Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301...   283   2e-76
Medtr5g460870.1 | hypothetical protein | HC | chr5:25259118-2525...   230   1e-60

>Medtr3g073480.1 | hypothetical protein | HC |
           chr3:33138549-33136466 | 20130731
          Length = 325

 Score =  533 bits (1374), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/325 (80%), Positives = 282/325 (86%), Gaps = 3/325 (0%)

Query: 1   MDPSSTNSVNGFYSFLTRGIDDLERVFLSNNFMSIQFXXXXXXXXXXXXXXXXXXVQKLH 60
           MDPSSTNSVNGFYSFLTRGIDDLERVFL+NNFMSIQF                  VQKLH
Sbjct: 1   MDPSSTNSVNGFYSFLTRGIDDLERVFLTNNFMSIQFLQRTLSLLRSLHTQLTLLVQKLH 60

Query: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGISGIESYFSAASNITSSLDSHQHITSQLSRQV 120
           LPVGDKWLDEYMDESSKLWEACHVLKSGISGIE+Y+SAASNITS+LDSH HIT Q+SRQ+
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACHVLKSGISGIENYYSAASNITSTLDSHIHITPQISRQI 120

Query: 121 IRAISGCRREAVGLEEENRALMETRIQPLSLRFDERVSIESKLNGFNGFRGVLYAMRNVS 180
           IRAISGCRREAVGLEEENRALMETRIQPLSLRFDERVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMETRIQPLSLRFDERVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 181 SXXXXXXXXXXVYCWPESSDFEVGG---YEYEGCLFLGSAFMISTARLQRRVAAEIGQMN 237
           S          VYC+PESSD   GG   YEYEGCLFLGS+FMISTARLQ+RVAAE+  +N
Sbjct: 181 SLLLMILLYGLVYCYPESSDLIFGGYEDYEYEGCLFLGSSFMISTARLQQRVAAEMAGIN 240

Query: 238 GGAGMLMHEFRRSKVAMEDLRGELERRGVVMDWETEVGVRDRVENLRASFGVLRSGAENI 297
           GG GML+HEFRRSKV +EDLRGE+ER+G +M+WE EV +R+RV+NLR+SFGVLRSGA+NI
Sbjct: 241 GGPGMLLHEFRRSKVVIEDLRGEMERKGSMMEWENEVAIRERVDNLRSSFGVLRSGADNI 300

Query: 298 IAQLDDFFDEIVEGRKKLLDFCSHR 322
           IAQLDDFFDEIVEGRKKLLDFCSHR
Sbjct: 301 IAQLDDFFDEIVEGRKKLLDFCSHR 325


>Medtr5g060880.1 | hypothetical protein | HC |
           chr5:25323771-25321968 | 20130731
          Length = 403

 Score =  389 bits (1000), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/313 (63%), Positives = 232/313 (74%), Gaps = 7/313 (2%)

Query: 11  GFYSFLTRGIDDLERVFLSNNFMSIQFXXXXXXXXXXXXXXXXXXVQKLHLPVGDKWLDE 70
           GFY+FL RGIDDLER FLSNN MSIQF                  VQKLHLPVGDKWLDE
Sbjct: 19  GFYTFLNRGIDDLERAFLSNNLMSIQFLQRVLSILRSFHTQLVLLVQKLHLPVGDKWLDE 78

Query: 71  YMDESSKLWEACHVLKSGISGIESYFSAASNITSSLDSHQHITSQLSRQVIRAISGCRRE 130
           YMDESSKLWE CH+LKSGISG + Y+SA  N+T+  DSH   T QL RQV+R IS CRRE
Sbjct: 79  YMDESSKLWETCHLLKSGISGFDGYYSAGINVTNFFDSHARFTPQLWRQVLRGISRCRRE 138

Query: 131 AVGLEEENRALMETRIQPLSLRFDERVSIESKLNGFNGFRGVLYAMRNVSSXXXXXXXXX 190
           A+GLEEENRALMETR+Q LSL FDERVS+ESKLNGFNGFRGVLYAMRN+SS         
Sbjct: 139 AMGLEEENRALMETRVQLLSLCFDERVSVESKLNGFNGFRGVLYAMRNISSMLLTILLHG 198

Query: 191 XVYCWPESSDFEVGGYEYEGCLFLGSAFMISTARLQRRVAAEIGQMNGGAGMLMHEFRRS 250
            VY  P +SD       YEG +F GS  M+S ARLQ+RVAAE+ +     GML++EFR +
Sbjct: 199 LVYRCPVTSDTVA---RYEGWMFHGSGLMMSAARLQQRVAAEMSEAE--PGMLLYEFRHA 253

Query: 251 KVAMEDLRGELERR--GVVMDWETEVGVRDRVENLRASFGVLRSGAENIIAQLDDFFDEI 308
           + ++E+LRGELER     V+ WE E G+R+RVE +R  FGVL+SGA+NI++QLDDFFDEI
Sbjct: 254 RASVEELRGELERNVSSQVVQWEMEDGLRERVECVRMCFGVLKSGADNIVSQLDDFFDEI 313

Query: 309 VEGRKKLLDFCSH 321
           VEGRKKLLDFCSH
Sbjct: 314 VEGRKKLLDFCSH 326


>Medtr8g088750.1 | DUF793 family protein | HC |
           chr8:36867521-36865470 | 20130731
          Length = 320

 Score =  325 bits (832), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 165/313 (52%), Positives = 222/313 (70%), Gaps = 7/313 (2%)

Query: 11  GFYSFLTRGIDDLER-VFLSNNFMSIQFXXXXXXXXXXXXXXXXXXVQKLHLPVGDKWLD 69
           GFY+FLT+G++ L + + LS+NFMSIQF                  VQ L LP+G KWLD
Sbjct: 14  GFYTFLTQGLNVLHQSLILSHNFMSIQFISEVLSSLQSFHSQLTLLVQNLCLPIGGKWLD 73

Query: 70  EYMDESSKLWEACHVLKSGISGIESYFSAASNITSSLDSHQHITSQLSRQVIRAISGCRR 129
           EYMDESS+LW+ CHVLKS ISGIE+Y SA SNI +SLD   H+T ++S QVIRA++ C+R
Sbjct: 74  EYMDESSRLWDICHVLKSSISGIENYSSAGSNIATSLDVFHHLTPEVSHQVIRAMNICQR 133

Query: 130 EAVGLEEENRALMETRIQPLSLRFDERVSIESKLNGFNGFRGVLYAMRNVSSXXXXXXXX 189
           E +G+EEEN+++METRIQ LS   ++ +S+ES LN +N FRGVLYAMR VSS        
Sbjct: 134 EIIGMEEENKSMMETRIQALSQSLNQNMSLESNLNEYNSFRGVLYAMRRVSSLLLMILLS 193

Query: 190 XXVYCWPESSDFEVGGYEYEGCLFLGSAFMISTARLQRRVAAEIGQMNGGAGMLMHEFRR 249
              YCW  SS F+  G  YEG L  GS+FM+S ARLQ +V  EI ++N   G+L+ EF++
Sbjct: 194 GVAYCWS-SSCFDHQG--YEGNLVFGSSFMVSMARLQHKVGKEIDRINVQPGVLLFEFQQ 250

Query: 250 SKVAMEDLRGELERRGVVMDWETEVGVRDRVENLRASFGVLRSGAENIIAQLDDFFDEIV 309
           +KVAME+L+ ELER   ++ ++ E  ++ +V+ L++ FG+L+ G EN+I ++DDFFDEIV
Sbjct: 251 AKVAMEELKVELER---IVVYDAEFEIQAKVDKLKSCFGLLKCGVENLIGKVDDFFDEIV 307

Query: 310 EGRKKLLDFCSHR 322
           EGRKKLLD CSH+
Sbjct: 308 EGRKKLLDMCSHK 320


>Medtr2g006850.1 | hypothetical protein | HC | chr2:642835-641301 |
           20130731
          Length = 304

 Score =  283 bits (724), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/318 (49%), Positives = 209/318 (65%), Gaps = 24/318 (7%)

Query: 4   SSTNSVNGFYSFLTRGIDDLERVFLSNNFMSIQFXXXXXXXXXXXXXXXXXXVQKLHLPV 63
           SS +S+NGFY+ L +G+ DL + F+S+NFMS QF                  V+KL LPV
Sbjct: 3   SSNSSINGFYNMLNQGLIDLHQTFISHNFMSFQFLSQVISSLQSFHSQLTLLVRKLRLPV 62

Query: 64  GDKWLDEYMDESSKLWEACHVLKSGISGIESYFSAASNITSSLDS-HQHITSQLSRQVIR 122
           G KWLDEYMDESS+LW++CHVLKS ISGI++Y+S+A+NI SSL   + H+T + SRQVIR
Sbjct: 63  GGKWLDEYMDESSRLWDSCHVLKSAISGIDNYYSSATNIVSSLHGYYHHVTPEFSRQVIR 122

Query: 123 AISGCRREAVGLEEENRALMETRIQPLSLRFDERVSI----ESKLNGFNGFRGVLYAMRN 178
           AI+ C+RE +G+EEEN+ L ETRIQ LS   ++  +I     SKLNGF+GFRGVL+AMR+
Sbjct: 123 AINVCQREILGMEEENKNLTETRIQQLSQCLNQNTNICSNSNSKLNGFSGFRGVLFAMRS 182

Query: 179 VSSXXXXXXXXXXVYCWPESSDFEVGGYEYEGCLFLGSAFMISTARLQRRVAAEIGQMNG 238
           VSS           YCW  S       + +EG        M+S   LQ++VA EI   N 
Sbjct: 183 VSSLLLMILLSGLAYCWSSSC------FHHEGQ-------MVSMEMLQQKVAEEIDN-ND 228

Query: 239 GAGMLMHEFRRSKVAMEDLRGELERRGVVMDWETEVGVRDRVENLRASFGVLRSGAENII 298
           G G+L+ EF+++K+AME+L+ ELE    +     E  ++++VEN++  FG+LR G + I 
Sbjct: 229 GQGILLFEFQKAKIAMEELKVELEN---ITYGGNE--IQEKVENVKNCFGLLRCGVDTIT 283

Query: 299 AQLDDFFDEIVEGRKKLL 316
            QLDDFFDEIVEGRKKL 
Sbjct: 284 GQLDDFFDEIVEGRKKLF 301


>Medtr5g460870.1 | hypothetical protein | HC |
           chr5:25259118-25258175 | 20130731
          Length = 259

 Score =  230 bits (587), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 122/193 (63%), Positives = 147/193 (76%), Gaps = 7/193 (3%)

Query: 132 VGLEEENRALMETRIQPLSLRFDERVSIESKLNGFNGFRGVLYAMRNVSSXXXXXXXXXX 191
           +GLEEENRALMETR+Q LSL FDERVS+ESKLNGFNGFRGVLYAMRN+SS          
Sbjct: 1   MGLEEENRALMETRVQLLSLCFDERVSVESKLNGFNGFRGVLYAMRNISSMLLTILLHGL 60

Query: 192 VYCWPESSDFEVGGYEYEGCLFLGSAFMISTARLQRRVAAEIGQMNGGAGMLMHEFRRSK 251
           VY  P +SD       YEG +F GS  M+S ARLQ+RVAAE+ +     GML++EFR ++
Sbjct: 61  VYRCPVTSDTVA---RYEGWMFHGSGLMMSAARLQQRVAAEMSEAE--PGMLLYEFRHAR 115

Query: 252 VAMEDLRGELERR--GVVMDWETEVGVRDRVENLRASFGVLRSGAENIIAQLDDFFDEIV 309
            ++E+LRGELER     V+ WE E G+R+RVE +R  FGVL+SGA+NI++QLDDFFDEIV
Sbjct: 116 ASVEELRGELERNVSSQVVQWEMEDGLRERVECVRMCFGVLKSGADNIVSQLDDFFDEIV 175

Query: 310 EGRKKLLDFCSHR 322
           EGRKKLLDFCSHR
Sbjct: 176 EGRKKLLDFCSHR 188