Miyakogusa Predicted Gene
- Lj0g3v0161909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0161909.1 Non Characterized Hit- tr|B9RSQ8|B9RSQ8_RICCO
Amine oxidase [copper-containing], putative
OS=Ricinus,36.03,4e-18,Amine oxidase N-terminal region,Copper amine
oxidase, N-terminal; no description,Copper amine
oxidas,NODE_80857_length_883_cov_10.083805.path1.1
(136 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g080500.1 | copper amine oxidase, enzyme domain protein | ... 209 5e-55
Medtr1g104590.1 | copper amine oxidase, enzyme domain protein | ... 83 6e-17
Medtr4g045887.1 | copper amine oxidase, enzyme domain protein | ... 78 2e-15
Medtr4g117660.1 | copper amine oxidase, enzyme domain protein | ... 76 7e-15
Medtr4g117670.1 | amine oxidase [copper containing] protein, put... 76 1e-14
Medtr4g117610.1 | copper amine oxidase, enzyme domain protein | ... 74 4e-14
Medtr1g104550.1 | copper amine oxidase, enzyme domain protein | ... 70 4e-13
>Medtr3g080500.1 | copper amine oxidase, enzyme domain protein | HC
| chr3:36420675-36426291 | 20130731
Length = 731
Score = 209 bits (533), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 95/122 (77%), Positives = 110/122 (90%)
Query: 15 KNKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEG 74
K+ EFN TI +RGVN+ADL CLPV+SGWYGTPVEEN R IKVQC+S +GTVNFYMKPIEG
Sbjct: 187 KSGEFNSTIRKRGVNLADLACLPVASGWYGTPVEENRRLIKVQCYSSKGTVNFYMKPIEG 246
Query: 75 VVVLVDMDRKEVVSISENGKNIPVAKGINTDYRYSIQKLNGEFKLVNPISLEQPKGPSFT 134
+ VLVDMD++EVVSI++NG NIPVA GI+TDYRYS+QKLNGE L+NPISLEQPKGPSFT
Sbjct: 247 LTVLVDMDKREVVSITDNGLNIPVANGIDTDYRYSVQKLNGELNLINPISLEQPKGPSFT 306
Query: 135 VE 136
V+
Sbjct: 307 VD 308
>Medtr1g104590.1 | copper amine oxidase, enzyme domain protein | HC
| chr1:47106005-47103079 | 20130731
Length = 675
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 74/119 (62%), Gaps = 6/119 (5%)
Query: 19 FNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGVVVL 78
F ++++R +N+++++C + GW+G E++ R +KV+C+ K G+ N Y +P+EGV +
Sbjct: 144 FKHSLNKRNINISNVLCAAFTVGWFGE--EKSKRTVKVKCYYKNGSANLYARPLEGVAAV 201
Query: 79 VDMDRKEVVSISENGKNIPVAKGINTDYRYSIQKLNGEF-KLVNPISLEQPKGPSFTVE 136
VD+D ++V S+ IPV K T+YR S K+ F ++ I++ Q GP FT++
Sbjct: 202 VDLDEMKIVGYSDR-HVIPVPKAEGTEYRAS--KMKPPFGPMLKGIAVSQHDGPGFTIQ 257
>Medtr4g045887.1 | copper amine oxidase, enzyme domain protein | HC
| chr4:15828099-15823973 | 20130731
Length = 675
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 19 FNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGVVVL 78
F ++ +RG+N+++++C P S GW+G EE+ R ++V CF KE TVNF+++PI G+ ++
Sbjct: 145 FIASLKKRGLNLSEVVCAPFSMGWFGE--EESKRTVRVDCFMKENTVNFFVRPISGLTMV 202
Query: 79 VDMDRKEVVSISENG-KNIPVAKGINTDYRYSIQKLNGEFKLVNPISLEQPKGPSFTV 135
D+ ++V + + +P A+ NT+Y+ S Q+ K + ++ QP+GP F +
Sbjct: 203 ADLGLMKIVEYHDREVEVVPTAE--NTEYKASKQRPPFGPKQ-HSLASHQPQGPGFLI 257
>Medtr4g117660.1 | copper amine oxidase, enzyme domain protein | HC
| chr4:48819977-48814098 | 20130731
Length = 675
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 19 FNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGVVVL 78
F ++ +RG+N+++++C + GW+G +EN R ++V CF KE TVN Y++PI G+ ++
Sbjct: 147 FIASVQKRGLNLSEVVCSSFTMGWFGE--KENRRTVRVDCFMKESTVNIYVRPITGITMV 204
Query: 79 VDMDRKEVVSISENG-KNIPVAKGINTDYRYSIQKLNGEFKLVNPISLEQPKGPSFTV 135
D+ ++V + + +P A+ NTDYR S Q K + ++ QP+GP F +
Sbjct: 205 ADLSLMKIVEYHDRDVEAVPTAE--NTDYRVSKQSPPFGPKQ-HSLASYQPQGPGFQI 259
>Medtr4g117670.1 | amine oxidase [copper containing] protein,
putative | HC | chr4:48832907-48835990 | 20130731
Length = 591
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 71/119 (59%), Gaps = 8/119 (6%)
Query: 19 FNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGVVVL 78
F ++ +RG+N+++++C S GW+G +E+ R +++ CF KE TVN Y++PI G+ ++
Sbjct: 63 FIASVKKRGLNLSEIVCSTFSMGWFGE--KESRRTVRIDCFMKESTVNIYVRPISGLTIV 120
Query: 79 VDMDRKEVVSISENG-KNIPVAKGINTDYRYSIQKLNGEF-KLVNPISLEQPKGPSFTV 135
VD+ R ++V + + +P A+ + Y + K N F + ++ QP+GP F +
Sbjct: 121 VDLGRMKIVEYHDREIETVPTAE----NNEYQVSKQNPPFGPKQHSLASHQPQGPGFQI 175
>Medtr4g117610.1 | copper amine oxidase, enzyme domain protein | HC
| chr4:48792612-48787651 | 20130731
Length = 668
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 15 KNKEFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEG 74
K F ++ +RG+N+++++C S GW+G EE+ R ++V CF KE +VN Y++PI G
Sbjct: 136 KYPAFIASVKKRGLNLSEVVCSTFSMGWFGE--EESKRTVRVDCFMKENSVNIYVRPISG 193
Query: 75 VVVLVDMDRKEVVSISENG-KNIPVAKGINTDYRYSIQKLNGEFKL-VNPISLEQPKGPS 132
+ ++VD+ +++V + + +P A+ NT+Y+ + K + F + ++ QP+GP
Sbjct: 194 LTIVVDLGLQKIVEYHDREIETVPTAE--NTEYQ--VSKQSPPFGPNQHSLTSHQPQGPG 249
Query: 133 FTVE 136
F ++
Sbjct: 250 FQIK 253
>Medtr1g104550.1 | copper amine oxidase, enzyme domain protein | HC
| chr1:47090073-47093518 | 20130731
Length = 658
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 18 EFNRTISQRGVNMADLICLPVSSGWYGTPVEENTRFIKVQCFSKEGTVNFYMKPIEGVVV 77
+F +I++RG+N++++ C+P + GWYG + R +KV CF ++ +VN + +P+EG+ +
Sbjct: 149 KFKESIAKRGLNLSEISCVPFTIGWYGEKITR--RALKVSCFYRDESVNIWARPVEGITL 206
Query: 78 LVDMDRKEVVSISENGKNIPVAKGINTDYRYS 109
LVD+D +++ ++ + +P+ K T+++ S
Sbjct: 207 LVDVDLIKIIMYNDRYR-VPMPKAEGTNFQSS 237