Miyakogusa Predicted Gene

Lj0g3v0161599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0161599.1 Non Characterized Hit- tr|H9BX05|H9BX05_9BACT
Putative uncharacterized protein OS=uncultured
bacteri,44.44,3e-19,DUF393,Putative thiol-disulphide oxidoreductase
DCC,CUFF.10035.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g103590.1 | thiol-disulfide oxidoreductase DCC | HC | chr2...   285   3e-77
Medtr5g035310.1 | thiol-disulfide oxidoreductase DCC | HC | chr5...    79   4e-15

>Medtr2g103590.1 | thiol-disulfide oxidoreductase DCC | HC |
           chr2:44603984-44606828 | 20130731
          Length = 178

 Score =  285 bits (728), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 139/167 (83%), Positives = 147/167 (88%), Gaps = 1/167 (0%)

Query: 39  AAVGRFSSTVSSLRPRKLNNTFATLSQTRSEEANWVEATSSFFDQDKRPIMLFDGVGNLC 98
           A++GR  S     R RK   TFATLSQ RS+  NWVEATSSFFDQDKRPIMLFDGV NLC
Sbjct: 13  ASIGRVKSITCPPRARKAT-TFATLSQPRSDTVNWVEATSSFFDQDKRPIMLFDGVCNLC 71

Query: 99  NGGVKFVRDNDRNKTIRYEPLQSEAGKMLLRRSGRAPDDISSVVLVENDRSYIKSEAVLK 158
           NGGVKFVRDNDRNK+IRYE LQSEAGKMLLRRSGRAPDDISSVVLVEN+RSYIKSEAVLK
Sbjct: 72  NGGVKFVRDNDRNKSIRYEALQSEAGKMLLRRSGRAPDDISSVVLVENNRSYIKSEAVLK 131

Query: 159 IMEYIDFPFPQLAFLVQFVPLFIRDFAYDNVANNRYTIFGRSESCEI 205
           IMEYID PFPQLAFL  F+PLF+RDF YDNVANNRYT+FGRSESCEI
Sbjct: 132 IMEYIDLPFPQLAFLFNFMPLFVRDFVYDNVANNRYTVFGRSESCEI 178


>Medtr5g035310.1 | thiol-disulfide oxidoreductase DCC | HC |
           chr5:15363912-15359797 | 20130731
          Length = 226

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 3/120 (2%)

Query: 88  IMLFDGVGNLCNGGVKFVRDNDRNKTIRYEPLQSEAGKMLLRRSGRAPDDI-SSVVLVEN 146
           ++L+DGV +LC+ GVK V   D+++ I++  +QS A +  LR SG   +D+    + VE 
Sbjct: 80  VVLYDGVCHLCHQGVKRVVRADKDRKIKFCCVQSNAAEPYLRASGLKREDVLRRFLFVEG 139

Query: 147 DRSYIK-SEAVLKIMEYIDFPFPQLAFLVQFVPLFIRDFAYDNVANNRYTIFGRSESCEI 205
              + + S A L+++ Y+  P+  ++ L   +P  IRD  YD +A NRY  FG++E C +
Sbjct: 140 LNVFSQGSTAALRVLSYLPLPYSAISCL-WVIPTPIRDAVYDYIAKNRYEWFGKAEDCLV 198