Miyakogusa Predicted Gene

Lj0g3v0161309.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0161309.1 Non Characterized Hit- tr|I3T5B4|I3T5B4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,64.56,7e-18,
,CUFF.10012.1
         (87 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g057020.1 | monoterpene synthase | LC | chr8:18839169-1884...    51   2e-07
Medtr2g065450.1 | monoterpene synthase | LC | chr2:27447459-2744...    50   6e-07
Medtr2g064425.1 | monoterpene synthase | HC | chr2:27329934-2732...    48   2e-06
Medtr2g064425.2 | monoterpene synthase | HC | chr2:27329934-2732...    48   2e-06
Medtr2g064425.4 | monoterpene synthase | HC | chr2:27329934-2732...    48   2e-06
Medtr2g064425.3 | monoterpene synthase | HC | chr2:27329934-2732...    48   2e-06

>Medtr8g057020.1 | monoterpene synthase | LC |
          chr8:18839169-18845710 | 20130731
          Length = 589

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 44 KASYKV-NNNTQTIPRQSAVFQPTIWTYDYIQSLSTENKK 82
          KASYKV N+  QTI R+ + FQP+IWT DYIQSLS+E K+
Sbjct: 40 KASYKVLNDQNQTISRRPSKFQPSIWTDDYIQSLSSEYKE 79


>Medtr2g065450.1 | monoterpene synthase | LC |
          chr2:27447459-27443342 | 20130731
          Length = 589

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 3/81 (3%)

Query: 7  IASRPFNCTKMHFP-LEGKSSSLTMRSPKLEVSCATRHKASYK-VNNNTQTIPRQSAVFQ 64
          + + PF+ TK   P L  K SSL   +P    S  T+  AS K   +++QTI R+SA  Q
Sbjct: 6  LGTLPFSYTKNILPPLGKKYSSLATCNPN-TFSIKTQCNASSKDAKDDSQTITRRSANSQ 64

Query: 65 PTIWTYDYIQSLSTENKKFTQ 85
          P+IWTYDYIQSL+    K T+
Sbjct: 65 PSIWTYDYIQSLTNLEVKHTK 85


>Medtr2g064425.1 | monoterpene synthase | HC |
          chr2:27329934-27325317 | 20130731
          Length = 591

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 7  IASRPFNCTKMHFPLEGKSSSLTMRSPKLEVSCATRHKASYKVNNNTQTIPRQSAVFQPT 66
          + + PF+  K   P  GK  S          S  T+ K SY  +++T    R+SA FQP+
Sbjct: 6  LGNLPFSFAKNILPPLGKKYSSLATCNFNTFSSKTQCKGSYIPSSST----RRSANFQPS 61

Query: 67 IWTYDYIQSLSTENKK 82
          IWTYDYIQSLS+E K+
Sbjct: 62 IWTYDYIQSLSSEYKE 77


>Medtr2g064425.2 | monoterpene synthase | HC |
          chr2:27329934-27325317 | 20130731
          Length = 576

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 7  IASRPFNCTKMHFPLEGKSSSLTMRSPKLEVSCATRHKASYKVNNNTQTIPRQSAVFQPT 66
          + + PF+  K   P  GK  S          S  T+ K SY  +++T    R+SA FQP+
Sbjct: 6  LGNLPFSFAKNILPPLGKKYSSLATCNFNTFSSKTQCKGSYIPSSST----RRSANFQPS 61

Query: 67 IWTYDYIQSLSTENKK 82
          IWTYDYIQSLS+E K+
Sbjct: 62 IWTYDYIQSLSSEYKE 77


>Medtr2g064425.4 | monoterpene synthase | HC |
          chr2:27329934-27325317 | 20130731
          Length = 440

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 7  IASRPFNCTKMHFPLEGKSSSLTMRSPKLEVSCATRHKASYKVNNNTQTIPRQSAVFQPT 66
          + + PF+  K   P  GK  S          S  T+ K SY  +++T    R+SA FQP+
Sbjct: 6  LGNLPFSFAKNILPPLGKKYSSLATCNFNTFSSKTQCKGSYIPSSST----RRSANFQPS 61

Query: 67 IWTYDYIQSLSTENKK 82
          IWTYDYIQSLS+E K+
Sbjct: 62 IWTYDYIQSLSSEYKE 77


>Medtr2g064425.3 | monoterpene synthase | HC |
          chr2:27329934-27325317 | 20130731
          Length = 425

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 7  IASRPFNCTKMHFPLEGKSSSLTMRSPKLEVSCATRHKASYKVNNNTQTIPRQSAVFQPT 66
          + + PF+  K   P  GK  S          S  T+ K SY  +++T    R+SA FQP+
Sbjct: 6  LGNLPFSFAKNILPPLGKKYSSLATCNFNTFSSKTQCKGSYIPSSST----RRSANFQPS 61

Query: 67 IWTYDYIQSLSTENKK 82
          IWTYDYIQSLS+E K+
Sbjct: 62 IWTYDYIQSLSSEYKE 77