Miyakogusa Predicted Gene

Lj0g3v0160769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0160769.1 Non Characterized Hit- tr|C6T419|C6T419_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24256
PE,60.66,0.0000000000002,seg,NULL; GCK,GCK,CUFF.9976.1
         (96 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g082300.2 | GCK domain protein | HC | chr4:32023831-320258...    68   2e-12
Medtr4g082300.1 | GCK domain protein | HC | chr4:32023831-320274...    68   2e-12

>Medtr4g082300.2 | GCK domain protein | HC | chr4:32023831-32025884
           | 20130731
          Length = 254

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 5   DRRIAWQS---HRRTRRTDHVEKCSQVTAVLKECMDAHADYYEPILRAEKIVEEQALVEL 61
           D  I W+        +  D VEKC++VTA LK+CMD H+DYYEPILRAEK  EEQ  +EL
Sbjct: 60  DTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILRAEKHAEEQVTIEL 119

Query: 62  E 62
           E
Sbjct: 120 E 120



 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 3/56 (5%)

Query: 5   DRRIAWQS---HRRTRRTDHVEKCSQVTAVLKECMDAHADYYEPILRAEKIVEEQA 57
           D  + W++     + ++ D  EKCS VT  L +CMD+++DY +PI++ EK VEEQA
Sbjct: 192 DTLVEWENCVKEAKEKKEDLAEKCSGVTTRLLQCMDSNSDYCKPIIKTEKRVEEQA 247


>Medtr4g082300.1 | GCK domain protein | HC | chr4:32023831-32027413
           | 20130731
          Length = 357

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 3/61 (4%)

Query: 5   DRRIAWQS---HRRTRRTDHVEKCSQVTAVLKECMDAHADYYEPILRAEKIVEEQALVEL 61
           D  I W+        +  D VEKC++VTA LK+CMD H+DYYEPILRAEK  EEQ  +EL
Sbjct: 60  DTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILRAEKHAEEQVTIEL 119

Query: 62  E 62
           E
Sbjct: 120 E 120



 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)

Query: 5   DRRIAWQS---HRRTRRTDHVEKCSQVTAVLKECMDAHADYYEPILRAEKIVEEQALVEL 61
           D  + W++        + D VEKCSQVT +LK+CMD+H+DYY PIL AEK +EEQA ++L
Sbjct: 286 DTFVDWENCMDEAEKNKEDVVEKCSQVTDLLKQCMDSHSDYYGPILMAEKHIEEQAAIDL 345

Query: 62  E 62
           E
Sbjct: 346 E 346



 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 3/56 (5%)

Query: 5   DRRIAWQS---HRRTRRTDHVEKCSQVTAVLKECMDAHADYYEPILRAEKIVEEQA 57
           D  + W++     + ++ D  EKCS VT  L +CMD+++DY +PI++ EK VEEQA
Sbjct: 192 DTLVEWENCVKEAKEKKEDLAEKCSGVTTRLLQCMDSNSDYCKPIIKTEKRVEEQA 247