Miyakogusa Predicted Gene
- Lj0g3v0160499.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0160499.1 tr|G7IUP2|G7IUP2_MEDTR Auxin-responsive protein
IAA OS=Medicago truncatula GN=MTR_2g101500 PE=4
SV=1,76.76,0,AUX_IAA,AUX/IAA protein;
IAA_ARF,Aux/IAA-ARF-dimerisation; FAMILY NOT NAMED,NULL; CAD & PB1
domains,,CUFF.9957.1
(330 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |... 500 e-142
Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |... 320 2e-87
Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |... 310 2e-84
Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |... 310 2e-84
Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |... 290 1e-78
Medtr6g488150.1 | auxin response factor | HC | chr6:33216291-332... 278 4e-75
Medtr5g067350.1 | auxin response factor | HC | chr5:28450190-284... 276 2e-74
Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |... 221 6e-58
Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |... 213 2e-55
Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |... 208 5e-54
Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |... 208 6e-54
Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |... 207 9e-54
Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |... 192 3e-49
Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |... 164 1e-40
Medtr1g040675.1 | auxin response factor | HC | chr1:15063378-150... 161 6e-40
Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |... 158 6e-39
Medtr6g488150.2 | auxin response factor | HC | chr6:33216341-332... 155 7e-38
Medtr1g076270.1 | auxin response factor | HC | chr1:33944737-339... 154 8e-38
Medtr1g093350.1 | auxin response factor | HC | chr1:33849453-338... 154 8e-38
Medtr5g067350.2 | auxin response factor | HC | chr5:28450190-284... 149 3e-36
Medtr1g040675.2 | auxin response factor | HC | chr1:15063472-150... 132 7e-31
Medtr1g069495.1 | auxin response factor | HC | chr1:30104004-300... 128 8e-30
Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |... 121 8e-28
Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |... 117 2e-26
Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |... 117 2e-26
Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |... 117 2e-26
Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |... 116 3e-26
Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |... 113 3e-25
Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568... 110 2e-24
Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568... 110 2e-24
Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |... 80 4e-15
Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |... 79 7e-15
Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |... 74 3e-13
Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |... 72 9e-13
Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |... 66 5e-11
Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |... 64 2e-10
Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |... 58 2e-08
Medtr1g024025.1 | auxin response factor 2 | LC | chr1:7778460-77... 58 2e-08
Medtr8g100050.1 | auxin response factor 2 | HC | chr8:40230869-4... 50 3e-06
>Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43637105-43634220 | 20130731
Length = 326
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/340 (77%), Positives = 272/340 (80%), Gaps = 24/340 (7%)
Query: 1 MSPPLEHDYIGLGEKPSMVGTSDNKISSSSLNFKETELRLGLPGCESPERK---PAGASS 57
MS PLEHDYIGL PSM TS SSLNFKETELRLGLPGCESP+RK AGA
Sbjct: 1 MSTPLEHDYIGLANNPSMDKTS------SSLNFKETELRLGLPGCESPDRKSVSAAGAGG 54
Query: 58 GVSLFG-KDLQE-KKHGPFKSPVAAVGAKRGFSDAIDGSCGKWGFSVAGGSEVELGKGAA 115
GVS F KDL+ P K+ VA+VGAKRGFSDAID S KW FS+ GSE G +
Sbjct: 55 GVSFFANKDLKSINVCSPLKNLVASVGAKRGFSDAIDESSKKWSFSMNDGSE-----GGS 109
Query: 116 LFSPRGGNVGKPLVALETQTN-----TTPAINEVAMAHQSAKPAQEKNKQVDGTNEHASA 170
LFSPRGGNVGKPL LETQTN T N + HQS EKNKQV GTNEHA+A
Sbjct: 110 LFSPRGGNVGKPLAGLETQTNIQKINTNATKNIKEVLHQSV---HEKNKQVSGTNEHANA 166
Query: 171 PAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRKVDLKT 230
PAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKP F CLYVKVSMDGAPYLRKVDLKT
Sbjct: 167 PAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPEFDCLYVKVSMDGAPYLRKVDLKT 226
Query: 231 YKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWM 290
Y NYME SSALEKMF+CFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWM
Sbjct: 227 YNNYMELSSALEKMFTCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWM 286
Query: 291 LVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
LVGDVPW MF DSCRRLRIMKGS+AIGLAPRAMEKSRSQN
Sbjct: 287 LVGDVPWGMFADSCRRLRIMKGSDAIGLAPRAMEKSRSQN 326
>Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:43394828-43391289 | 20130731
Length = 293
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/335 (57%), Positives = 213/335 (63%), Gaps = 47/335 (14%)
Query: 1 MSPPLEHDYIGLGEKPSMVGTSDNKISSSSLNFKETELRLGLPGCESPERKPAGASSGVS 60
MS P+E Y GE PSM + K S LN K TELRLGLPG ESPER+ G
Sbjct: 1 MSVPVEQGY---GEVPSM----ETKERSIGLNLKATELRLGLPGSESPERENGGV----- 48
Query: 61 LFGKDLQEKKHGPFKSPVAAVGAKRGFSDAI-DGSCGKWGFSVAGGSEVELGKGAALFSP 119
KS V+ GAKRGFSDAI DG GKW S GGSEV L K LFSP
Sbjct: 49 -------------LKSLVS--GAKRGFSDAITDGGSGKWVLSGNGGSEVGLCKDGNLFSP 93
Query: 120 RGGNVGKPLVALETQTNTTPAINEVAMAH---QSAKPAQEKNKQVDGTNEHASAPAAKAQ 176
+ VG E P V + S KP + QV S P++KAQ
Sbjct: 94 KAKGVG------ECNNQQNPFSASVVVKETVTHSPKPLHDNKPQV-------SPPSSKAQ 140
Query: 177 VVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYME 236
VVGWPPIRSFRKN+M S KN+ +AE K CLYVKVSM+GAPYLRKVDL + +Y E
Sbjct: 141 VVGWPPIRSFRKNSMVSQPQKNDADAEAKSE--CLYVKVSMEGAPYLRKVDLNGFSSYRE 198
Query: 237 FSSALEKMFSCFTIGQCNSPGLPGKD-GLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDV 295
SSALEKMFSCFTI QC S G+ ++ LSES L DLLHGSEYVLTYEDKDGDWMLVGDV
Sbjct: 199 LSSALEKMFSCFTISQCGSYGVSCREKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDV 258
Query: 296 PWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
PWEMFT+SC+RLRIMK SEAIGLAPRAMEK +S+N
Sbjct: 259 PWEMFTESCKRLRIMKSSEAIGLAPRAMEKCKSRN 293
>Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126019-13120497 | 20130731
Length = 335
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/345 (51%), Positives = 221/345 (64%), Gaps = 40/345 (11%)
Query: 1 MSPPLEHDYIGLGEKPSMVGTSDNKISS------SSLNFKETELRLGLPGCESPERKPAG 54
+S +E +Y+GL + S V + D+ + S +LN K TELRLGLPG +SPER+
Sbjct: 16 LSSTMERNYLGLSDCSS-VDSCDSTLPSLCDEKKVNLNLKATELRLGLPGSQSPERE--- 71
Query: 55 ASSGVSLFGKDLQEK--------KHGPFKSPVAAVGAKRGFSDAIDG-SCGKWGFSVAGG 105
+ L EK K G K+ V+ G KRGF+D +DG S GK+ G
Sbjct: 72 --MDSDFYLTKLDEKPLFPLLPAKDGLQKNVVS--GNKRGFADTVDGFSQGKFN----GN 123
Query: 106 SEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAHQSAKPAQEKNKQVDGTN 165
+ + + + SPR P A + P+ +V A + +
Sbjct: 124 TGINV-----MLSPR------PAGAQASTVKEMPS--KVLQERPCAARGTAGHNHAGAAS 170
Query: 166 EHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRK 225
APA+KAQVVGWPPIRSFRKN+MA+ NNDE +GKPG L+VKVSMDGAPYLRK
Sbjct: 171 VAGCAPASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRK 230
Query: 226 VDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDK 285
VDL+TY Y + SSALEKMFSCFT+GQC S G PGK+ +SES LRDLLHGSEYVLTYEDK
Sbjct: 231 VDLRTYATYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDK 290
Query: 286 DGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
DGDWMLVGDVPWEMF D+CRRL+IMKGS+AIGLAPRAMEKS+S++
Sbjct: 291 DGDWMLVGDVPWEMFIDTCRRLKIMKGSDAIGLAPRAMEKSKSRS 335
>Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126144-13120365 | 20130731
Length = 335
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/345 (51%), Positives = 221/345 (64%), Gaps = 40/345 (11%)
Query: 1 MSPPLEHDYIGLGEKPSMVGTSDNKISS------SSLNFKETELRLGLPGCESPERKPAG 54
+S +E +Y+GL + S V + D+ + S +LN K TELRLGLPG +SPER+
Sbjct: 16 LSSTMERNYLGLSDCSS-VDSCDSTLPSLCDEKKVNLNLKATELRLGLPGSQSPERE--- 71
Query: 55 ASSGVSLFGKDLQEK--------KHGPFKSPVAAVGAKRGFSDAIDG-SCGKWGFSVAGG 105
+ L EK K G K+ V+ G KRGF+D +DG S GK+ G
Sbjct: 72 --MDSDFYLTKLDEKPLFPLLPAKDGLQKNVVS--GNKRGFADTVDGFSQGKFN----GN 123
Query: 106 SEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAHQSAKPAQEKNKQVDGTN 165
+ + + + SPR P A + P+ +V A + +
Sbjct: 124 TGINV-----MLSPR------PAGAQASTVKEMPS--KVLQERPCAARGTAGHNHAGAAS 170
Query: 166 EHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRK 225
APA+KAQVVGWPPIRSFRKN+MA+ NNDE +GKPG L+VKVSMDGAPYLRK
Sbjct: 171 VAGCAPASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRK 230
Query: 226 VDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDK 285
VDL+TY Y + SSALEKMFSCFT+GQC S G PGK+ +SES LRDLLHGSEYVLTYEDK
Sbjct: 231 VDLRTYATYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDK 290
Query: 286 DGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
DGDWMLVGDVPWEMF D+CRRL+IMKGS+AIGLAPRAMEKS+S++
Sbjct: 291 DGDWMLVGDVPWEMFIDTCRRLKIMKGSDAIGLAPRAMEKSKSRS 335
>Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:28204029-28199991 | 20130731
Length = 356
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 209/346 (60%), Gaps = 57/346 (16%)
Query: 6 EHDYIGLGEKPSMVGTSDNKISSS---SLNFKETELRLGLPGCESPERKPAGASSGVSLF 62
E +Y+GL + S+ ++ +S +LN K TELRLGLPG +SPER + LF
Sbjct: 47 ERNYLGLSDCSSVDSSTVPSLSDEKKENLNLKATELRLGLPGSQSPERD-------LDLF 99
Query: 63 ---GKDLQEKKHGPF----------KSPVAAVGAKRGFSDAIDGSCGKWGFSVA---GGS 106
L EK P G KRGF+D ++ F A +
Sbjct: 100 PLNSTKLDEKPLFPLLPTKDGICSLSQKTVVSGNKRGFADTLEV------FPEAKYTANT 153
Query: 107 EVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAHQSAKPAQEKNKQVDGTNE 166
V + L SPR P A T P K QE +GT
Sbjct: 154 RVNI-----LLSPR------PSGAQPTTIKEMPK-----------KVVQESPCTANGTGA 191
Query: 167 --HASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLR 224
SAPAAKAQVVGWPPIRSFRKN++A+ +KNNDE +GKPG L+VKVSMDGAPYLR
Sbjct: 192 PISGSAPAAKAQVVGWPPIRSFRKNSLATT-SKNNDEVDGKPGAAALFVKVSMDGAPYLR 250
Query: 225 KVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYED 284
KVDL+ Y Y E SS LEKMFSCFT+GQC S G PGK+ LSES L+D LHGSEYV+TYED
Sbjct: 251 KVDLRNYTTYQELSSDLEKMFSCFTLGQCGSHGGPGKEMLSESKLKDFLHGSEYVVTYED 310
Query: 285 KDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
KDGDWMLVGDVPW+MF D+C+RL+IMKGS+AIGLAPRAMEKS+S++
Sbjct: 311 KDGDWMLVGDVPWDMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS 356
>Medtr6g488150.1 | auxin response factor | HC |
chr6:33216291-33219398 | 20130731
Length = 254
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/307 (54%), Positives = 188/307 (61%), Gaps = 66/307 (21%)
Query: 27 SSSSLNFKETELRLGLPGCESPERKPAGASSGVSLFGKDLQEKKHGPFKSPVAAV--GAK 84
S++ LN K TELRLGLPG ESPER DL E+K+ + ++ GAK
Sbjct: 11 SNNGLNLKATELRLGLPGSESPER------------DNDLLEEKNAYSLCMLNSLFSGAK 58
Query: 85 RGFSDAIDGSCGKWGFSVAGGSEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEV 144
RGFSDAID + K S + G+V K QTN
Sbjct: 59 RGFSDAID-----------------MRKS----SNQQGSVAKD------QTN-------- 83
Query: 145 AMAHQSAKPAQEKNKQVDGTNEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKN-NDEAE 203
P EK K S AAK QVVGWPPIRSFRKN+MA+ KN ND+ E
Sbjct: 84 --------PLNEKKKS------QISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVE 129
Query: 204 GKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDG 263
K G CLYVKVSMDGAPYLRKVDLK + Y E SSALEKMFSCFTI Q S G+ G+
Sbjct: 130 AKSG--CLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISQFGSHGVFGQGN 187
Query: 264 LSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAM 323
+ ES L DLLHGSEYVLTYEDKDGDWMLVGDVPW+MF DSC+RLRIMK SEAIGLAPRAM
Sbjct: 188 VCESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWKMFIDSCKRLRIMKSSEAIGLAPRAM 247
Query: 324 EKSRSQN 330
EK +S+N
Sbjct: 248 EKCKSRN 254
>Medtr5g067350.1 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 347
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 210/348 (60%), Gaps = 48/348 (13%)
Query: 2 SPPLEHDYIGL---------GEKPSMVGTSDNKISSSSLNFKETELRLGLPGCESPERKP 52
S P E +Y+GL P + D + S+LN K TELRLGLPG SPER
Sbjct: 29 SKPKEFNYMGLPSSNCSSVDSSVPKIQSFKDE--TKSNLNLKATELRLGLPGSLSPERDS 86
Query: 53 AGASSGVS-------LFGKDLQEKKHGPFKSPVAAVGAKRGFSDAIDGSCGKWGFSVAGG 105
+ S LF Q+ H F+S A +G KRGFSDA++
Sbjct: 87 SDFCLRSSKQFDEKPLFPLHPQKDDH-LFESKPAVLGNKRGFSDAMNVF----------- 134
Query: 106 SEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAHQSAKPAQEKNKQVDGT- 164
SE +L + + G Q I V + + E ++G+
Sbjct: 135 SEGKLKPSSKMLENVAG-----------QKVKADEIATVKIGLERPNGVGESKPGLNGSA 183
Query: 165 -NEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFG-CLYVKVSMDGAPY 222
N +++APA+KAQVVGWPPIRSFRKN++ + +KN +E +GK G G ++VKVSMDGAPY
Sbjct: 184 NNGNSTAPASKAQVVGWPPIRSFRKNSLTT-ASKNTEEVDGKLGSGGAVFVKVSMDGAPY 242
Query: 223 LRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTY 282
LRKVDLK Y Y E SS+LEKMFSCFTIGQC S G L+E+ LRDLLHGSEYV+TY
Sbjct: 243 LRKVDLKNYTAYSELSSSLEKMFSCFTIGQCESHG---NQMLNETKLRDLLHGSEYVITY 299
Query: 283 EDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
EDKDGDWMLVGDVPWEMF D+CRRLRIMK S+AIGLAPRA+EKS+S+N
Sbjct: 300 EDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLAPRAVEKSKSRN 347
>Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 253
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/307 (46%), Positives = 172/307 (56%), Gaps = 73/307 (23%)
Query: 29 SSLNFKETELRLGLPGCESPERKPAGASSGVSLFGKDLQEKKHGPFKSPVAAVGAKRGFS 88
S +NF+ETELRLGLPG AG HG +SPV
Sbjct: 13 SLINFEETELRLGLPG--------AG---------------DHG--ESPVK--------- 38
Query: 89 DAIDGSCGKWGFSVAGGSEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAH 148
SCGK GFS +++L N +P + + +
Sbjct: 39 ----NSCGKRGFSETANVDLKL-------------------------NLSPINDSASSSS 69
Query: 149 QSAKPAQEKNKQVDGTNEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAE----- 203
A A+ K K + + P AKAQVVGWPP+RSFRKN + + K+N E E
Sbjct: 70 TIASVAENKGKDTTTSATVSPPPRAKAQVVGWPPVRSFRKNIVNVH-QKSNSETEVDKSI 128
Query: 204 -GKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKD 262
G G G +VKVSMDGAPYLRKVDLK YK+Y E S AL KMFS FTI C S KD
Sbjct: 129 SGGGGNGA-FVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQ--VTKD 185
Query: 263 GLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRA 322
++ES L DLL+GS+YV TYEDKDGDWMLVGDVPWEMF SC+RLRIMKGSEAIGLAPRA
Sbjct: 186 FMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGLAPRA 245
Query: 323 MEKSRSQ 329
+EK +++
Sbjct: 246 VEKCKNR 252
>Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31340838-31337022 | 20130731
Length = 245
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 138/202 (68%), Gaps = 6/202 (2%)
Query: 132 ETQTNTTPAINEVAMAHQSAKPAQEKNKQVDGTNEHASAPAAKAQVVGWPPIRSFRKNTM 191
E++TNT ++ + P + ++ ++ + P AKAQVVGWPP+RSFRKN
Sbjct: 45 ESETNTVDLKLNLSTKEGATDPQFKPKEKALLLSDSGAKPPAKAQVVGWPPVRSFRKNMF 104
Query: 192 ASNLTKNNDEAEGKPGFG---CLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCF 248
A+ + E K +VKVSMDGAPYLRKVDLK YK+Y E S AL KMF+ F
Sbjct: 105 AAQKSNEGSEESEKKNSNNNPISFVKVSMDGAPYLRKVDLKMYKSYPELSDALAKMFNSF 164
Query: 249 TIGQCNSPGLPGKDGLSESS-LRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRL 307
T G C S G+ KD ++ES+ L DLL+ S+YV TYEDKDGDWMLVGDVPWEMF DSC+RL
Sbjct: 165 TTGNCESQGI--KDFMNESNKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFIDSCKRL 222
Query: 308 RIMKGSEAIGLAPRAMEKSRSQ 329
RIMKG EAIGLAPRAMEK +++
Sbjct: 223 RIMKGKEAIGLAPRAMEKCKNR 244
>Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900363 | 20130731
Length = 236
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 118/161 (73%), Gaps = 3/161 (1%)
Query: 171 PAAKAQVVGWPPIRSFRKNTMASNLTKNND-EAEGKPGFGCLYVKVSMDGAPYLRKVDLK 229
P AKAQVVGWPP+RS+RKN MA + D E +VKVSMDGAPYLRKVDL
Sbjct: 78 PPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLT 137
Query: 230 TYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDW 289
YK Y + S AL KMFS FT G + G+ D ++ES L DLL+ SEYV TYEDKDGDW
Sbjct: 138 MYKTYKDLSDALAKMFSSFTTGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGDW 195
Query: 290 MLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
MLVGDVPWEMF SC+RLRIMKGSEAIGLAPRAMEK ++++
Sbjct: 196 MLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKNRS 236
>Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 243
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/296 (46%), Positives = 162/296 (54%), Gaps = 73/296 (24%)
Query: 29 SSLNFKETELRLGLPGCESPERKPAGASSGVSLFGKDLQEKKHGPFKSPVAAVGAKRGFS 88
S +NF+ETELRLGLPG AG HG +SPV
Sbjct: 13 SLINFEETELRLGLPG--------AG---------------DHG--ESPVK--------- 38
Query: 89 DAIDGSCGKWGFSVAGGSEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAH 148
SCGK GFS +++L N +P + + +
Sbjct: 39 ----NSCGKRGFSETANVDLKL-------------------------NLSPINDSASSSS 69
Query: 149 QSAKPAQEKNKQVDGTNEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAE----- 203
A A+ K K + + P AKAQVVGWPP+RSFRKN + + K+N E E
Sbjct: 70 TIASVAENKGKDTTTSATVSPPPRAKAQVVGWPPVRSFRKNIVNVH-QKSNSETEVDKSI 128
Query: 204 -GKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKD 262
G G G +VKVSMDGAPYLRKVDLK YK+Y E S AL KMFS FTI C S KD
Sbjct: 129 SGGGGNGA-FVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQ--VTKD 185
Query: 263 GLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGL 318
++ES L DLL+GS+YV TYEDKDGDWMLVGDVPWEMF SC+RLRIMKGSEAIGL
Sbjct: 186 FMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGL 241
>Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:38527122-38532646 | 20130731
Length = 250
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 125/161 (77%), Gaps = 5/161 (3%)
Query: 171 PAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCL-YVKVSMDGAPYLRKVDLK 229
P AKAQVVGWPP+RS+RKN +A + K+ E F + +VKVSMDGAPYLRKVDLK
Sbjct: 94 PPAKAQVVGWPPVRSYRKNMLA--MQKSESEKNSSSNFNAITFVKVSMDGAPYLRKVDLK 151
Query: 230 TYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDW 289
Y +Y + S +L KMFS FTIG C S G+ KD ++ES L DLL+ S+YV TYEDKDGDW
Sbjct: 152 MYTSYSQLSDSLGKMFSSFTIGNCESQGM--KDFMNESKLMDLLNNSDYVPTYEDKDGDW 209
Query: 290 MLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
MLVGDVPWEMF +SC+RLRIMKG EAIG+APRAMEK ++++
Sbjct: 210 MLVGDVPWEMFVESCKRLRIMKGKEAIGIAPRAMEKCKNRS 250
>Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900946 | 20130731
Length = 239
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
Query: 171 PAAKAQVVGWPPIRSFRKNTMASNLTKNND-EAEGKPGFGCLYVKVSMDGAPYLRKVDLK 229
P AKAQVVGWPP+RS+RKN MA + D E +VKVSMDGAPYLRKVDL
Sbjct: 78 PPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLT 137
Query: 230 TYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDW 289
YK Y + S AL KMFS FT G + G+ D ++ES L DLL+ SEYV TYEDKDGDW
Sbjct: 138 MYKTYKDLSDALAKMFSSFTTGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGDW 195
Query: 290 MLVGDVPWEMFTDSCRRLRIMKGSEAIGL 318
MLVGDVPWEMF SC+RLRIMKGSEAIGL
Sbjct: 196 MLVGDVPWEMFVGSCKRLRIMKGSEAIGL 224
>Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31369872-31371491 | 20130731
Length = 204
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 103/155 (66%), Gaps = 25/155 (16%)
Query: 164 TNEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYL 223
++ +AP +KAQVVGWPPIRS+RKN+ L + E G +Y+KVSM GAPYL
Sbjct: 72 NDDQDNAPPSKAQVVGWPPIRSYRKNS----LQQKKGEEVG------MYLKVSMAGAPYL 121
Query: 224 RKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYE 283
RK+DLK YK+Y E LE MF C TIG E S R+ +GSE+V TYE
Sbjct: 122 RKIDLKVYKSYSELLKVLENMFKC-TIG--------------EYSEREGYNGSEFVPTYE 166
Query: 284 DKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGL 318
DKDGDWMLVGDVPWEMF SC+RLRIMKGSEA GL
Sbjct: 167 DKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAKGL 201
>Medtr1g040675.1 | auxin response factor | HC |
chr1:15063378-15065770 | 20130731
Length = 186
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 105/163 (64%), Gaps = 31/163 (19%)
Query: 160 QVDGTNEH----ASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKV 215
+V ++H ++AP AKA++VGWPPIRS+RKNT+ EAE G +YVKV
Sbjct: 47 KVSNDDQHVESSSAAPPAKAKIVGWPPIRSYRKNTL--------QEAE----VGGIYVKV 94
Query: 216 SMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHG 275
SMDGAPYLRK+DL+ Y Y E ALE MF TIG E S R+ G
Sbjct: 95 SMDGAPYLRKIDLRIYGGYPELLKALETMFK-LTIG--------------EYSEREGYKG 139
Query: 276 SEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGL 318
SEY TYEDKDGDWMLVGDVPW+MF SC+RLRIMKG+EA GL
Sbjct: 140 SEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEARGL 182
>Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903407-33900363 | 20130731
Length = 204
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 89/129 (68%), Gaps = 3/129 (2%)
Query: 171 PAAKAQVVGWPPIRSFRKNTMASNLTKNND-EAEGKPGFGCLYVKVSMDGAPYLRKVDLK 229
P AKAQVVGWPP+RS+RKN MA + D E +VKVSMDGAPYLRKVDL
Sbjct: 78 PPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLT 137
Query: 230 TYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDW 289
YK Y + S AL KMFS FT G + G+ D ++ES L DLL+ SEYV TYEDKDGDW
Sbjct: 138 MYKTYKDLSDALAKMFSSFTTGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGDW 195
Query: 290 MLVGDVPWE 298
MLVGDVPWE
Sbjct: 196 MLVGDVPWE 204
>Medtr6g488150.2 | auxin response factor | HC |
chr6:33216341-33219347 | 20130731
Length = 193
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 125/230 (54%), Gaps = 68/230 (29%)
Query: 27 SSSSLNFKETELRLGLPGCESPERKPAGASSGVSLFGKDLQEKKHGPFKSPVAAV--GAK 84
S++ LN K TELRLGLPG ESPER DL E+K+ + ++ GAK
Sbjct: 11 SNNGLNLKATELRLGLPGSESPER------------DNDLLEEKNAYSLCMLNSLFSGAK 58
Query: 85 RGFSDAIDGSCGKWGFSVAGGSEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEV 144
RGFSDAID + K S + G+V K QTN
Sbjct: 59 RGFSDAID-----------------MRKS----SNQQGSVAKD------QTN-------- 83
Query: 145 AMAHQSAKPAQEKNK-QVDGTNEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKN-NDEA 202
P EK K Q+ G+ AAK QVVGWPPIRSFRKN+MA+ KN ND+
Sbjct: 84 --------PLNEKKKSQISGS-------AAKEQVVGWPPIRSFRKNSMATQSQKNDNDDV 128
Query: 203 EGKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQ 252
E K G CLYVKVSMDGAPYLRKVDLK + Y E SSALEKMFSCFTI +
Sbjct: 129 EAKSG--CLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISE 176
>Medtr1g076270.1 | auxin response factor | HC |
chr1:33944737-33945503 | 20130731
Length = 178
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 103/167 (61%), Gaps = 27/167 (16%)
Query: 152 KPAQEKNKQVDGTNEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCL 211
+P E +K +AP +KA++VGWPPIRS+RKN++ EA G +
Sbjct: 39 RPLTETSKDSGSKTSDDAAPPSKAKIVGWPPIRSYRKNSL------QEAEASG------I 86
Query: 212 YVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRD 271
YVKVS+DGAPYLRK+DL+ Y Y + ALE MF TIG + K+G
Sbjct: 87 YVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFK-LTIGNYSE-----KEGY------- 133
Query: 272 LLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGL 318
GSEY TYEDKDGDWMLVGDVPWEMF SC+RLRIMKG+EA G+
Sbjct: 134 --KGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKGTEARGV 178
>Medtr1g093350.1 | auxin response factor | HC |
chr1:33849453-33847986 | 20130731
Length = 178
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 103/167 (61%), Gaps = 27/167 (16%)
Query: 152 KPAQEKNKQVDGTNEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCL 211
+P E +K +AP +KA++VGWPPIRS+RKN++ EA G +
Sbjct: 39 RPLTETSKDSGSKTSDDAAPPSKAKIVGWPPIRSYRKNSL------QEAEASG------I 86
Query: 212 YVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRD 271
YVKVS+DGAPYLRK+DL+ Y Y + ALE MF TIG + K+G
Sbjct: 87 YVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFK-LTIGNYSE-----KEGY------- 133
Query: 272 LLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGL 318
GSEY TYEDKDGDWMLVGDVPWEMF SC+RLRIMKG+EA G+
Sbjct: 134 --KGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKGTEARGV 178
>Medtr5g067350.2 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 272
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 143/270 (52%), Gaps = 45/270 (16%)
Query: 2 SPPLEHDYIGLGEK---------PSMVGTSDNKISSSSLNFKETELRLGLPGCESPERKP 52
S P E +Y+GL P + D + S+LN K TELRLGLPG SPER
Sbjct: 29 SKPKEFNYMGLPSSNCSSVDSSVPKIQSFKDE--TKSNLNLKATELRLGLPGSLSPERDS 86
Query: 53 AGASSGVS-------LFGKDLQEKKHGPFKSPVAAVGAKRGFSDAIDGSCGKWGFSVAGG 105
+ S LF Q+ H F+S A +G KRGFSDA++
Sbjct: 87 SDFCLRSSKQFDEKPLFPLHPQKDDH-LFESKPAVLGNKRGFSDAMNVF----------- 134
Query: 106 SEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAHQSAKPAQEKNKQVDGT- 164
SE +L + + G Q I V + + E ++G+
Sbjct: 135 SEGKLKPSSKMLENVAG-----------QKVKADEIATVKIGLERPNGVGESKPGLNGSA 183
Query: 165 -NEHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFG-CLYVKVSMDGAPY 222
N +++APA+KAQVVGWPPIRSFRKN++ + +KN +E +GK G G ++VKVSMDGAPY
Sbjct: 184 NNGNSTAPASKAQVVGWPPIRSFRKNSLTT-ASKNTEEVDGKLGSGGAVFVKVSMDGAPY 242
Query: 223 LRKVDLKTYKNYMEFSSALEKMFSCFTIGQ 252
LRKVDLK Y Y E SS+LEKMFSCFTIG+
Sbjct: 243 LRKVDLKNYTAYSELSSSLEKMFSCFTIGR 272
>Medtr1g040675.2 | auxin response factor | HC |
chr1:15063472-15065737 | 20130731
Length = 162
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 88/143 (61%), Gaps = 31/143 (21%)
Query: 160 QVDGTNEH----ASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKV 215
+V ++H ++AP AKA++VGWPPIRS+RKNT+ EAE G +YVKV
Sbjct: 47 KVSNDDQHVESSSAAPPAKAKIVGWPPIRSYRKNTL--------QEAE----VGGIYVKV 94
Query: 216 SMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHG 275
SMDGAPYLRK+DL+ Y Y E ALE MF TIG E S R+ G
Sbjct: 95 SMDGAPYLRKIDLRIYGGYPELLKALETMFK-LTIG--------------EYSEREGYKG 139
Query: 276 SEYVLTYEDKDGDWMLVGDVPWE 298
SEY TYEDKDGDWMLVGDVPWE
Sbjct: 140 SEYAPTYEDKDGDWMLVGDVPWE 162
>Medtr1g069495.1 | auxin response factor | HC |
chr1:30104004-30099851 | 20130731
Length = 272
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 102/188 (54%), Gaps = 34/188 (18%)
Query: 175 AQVVGWPPIRSFRKNTMASNL------------TKNNDEA-----------------EGK 205
+QVVGWPP+RS+R N+ +N +KNN+ E +
Sbjct: 81 SQVVGWPPLRSYRVNSFNANAKSTEAFNSVAEKSKNNNIVVRKSTDNGNDDNHINIKEKR 140
Query: 206 PGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKD-GL 264
+VKV+MDG P RKVDL + +Y + LE MF T S G G+D +
Sbjct: 141 NLRKSPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTS-VTSKGSNGEDHNM 199
Query: 265 SESSLRD--LLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPR 321
+ R LL GS ++VLTYEDK+GDWMLVGDVPW MF S RRLRIM+ SEA GLAPR
Sbjct: 200 TTRGERHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPR 259
Query: 322 AMEKSRSQ 329
EK+ Q
Sbjct: 260 LEEKNSRQ 267
>Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:3041610-3037433 | 20130731
Length = 178
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 92/150 (61%), Gaps = 32/150 (21%)
Query: 174 KAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYLRKVDLKTYKN 233
K QVVGWPP+ S+RK M EG +Y+KVSMDGAPYLRK+DL +K
Sbjct: 52 KNQVVGWPPVCSYRKKNMN----------EGSK----MYMKVSMDGAPYLRKIDLGLHKG 97
Query: 234 YMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVG 293
Y+E + ALEK+F C I E +L+D E+V YEDKDGDWMLVG
Sbjct: 98 YLELALALEKLFGCCGI---------------EEALKDA-DNCEHVPIYEDKDGDWMLVG 141
Query: 294 DVPWEMFTDSCRRLRIMKGSEA--IGLAPR 321
DVPWEMF +SC+RLRIMK S+A GL P+
Sbjct: 142 DVPWEMFIESCKRLRIMKRSDAKGFGLQPK 171
>Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 96/184 (52%), Gaps = 27/184 (14%)
Query: 161 VDGTNEHASAPAAKAQVVGWPPIRSFRKN------------------TMASNLTKNNDEA 202
V T++ +AP VVGWPPIRSFRKN M +N++
Sbjct: 84 VSNTSQKRTAPGP---VVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPI 140
Query: 203 EGKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPG-- 260
+ G G L+VK++MDG P RKVDL Y +Y SSA++ +F Q +S G
Sbjct: 141 DNNYGKG-LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNN 199
Query: 261 KDGLSESSLRDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSE--AIG 317
K E + LL GS EY L YED +GD MLVGDVPW MF + +RLR++K +E A
Sbjct: 200 KKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFT 259
Query: 318 LAPR 321
L R
Sbjct: 260 LGTR 263
>Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340807-43336605 | 20130731
Length = 269
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 96/184 (52%), Gaps = 27/184 (14%)
Query: 161 VDGTNEHASAPAAKAQVVGWPPIRSFRKN------------------TMASNLTKNNDEA 202
V T++ +AP VVGWPPIRSFRKN M +N++
Sbjct: 84 VSNTSQKRTAPGP---VVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPI 140
Query: 203 EGKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPG-- 260
+ G G L+VK++MDG P RKVDL Y +Y SSA++ +F Q +S G
Sbjct: 141 DNNYGKG-LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNN 199
Query: 261 KDGLSESSLRDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSE--AIG 317
K E + LL GS EY L YED +GD MLVGDVPW MF + +RLR++K +E A
Sbjct: 200 KKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFT 259
Query: 318 LAPR 321
L R
Sbjct: 260 LGTR 263
>Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 96/184 (52%), Gaps = 27/184 (14%)
Query: 161 VDGTNEHASAPAAKAQVVGWPPIRSFRKN------------------TMASNLTKNNDEA 202
V T++ +AP VVGWPPIRSFRKN M +N++
Sbjct: 84 VSNTSQKRTAPGP---VVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPI 140
Query: 203 EGKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPG-- 260
+ G G L+VK++MDG P RKVDL Y +Y SSA++ +F Q +S G
Sbjct: 141 DNNYGKG-LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNN 199
Query: 261 KDGLSESSLRDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSE--AIG 317
K E + LL GS EY L YED +GD MLVGDVPW MF + +RLR++K +E A
Sbjct: 200 KKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFT 259
Query: 318 LAPR 321
L R
Sbjct: 260 LGTR 263
>Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340462-43336605 | 20130731
Length = 268
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 92/178 (51%), Gaps = 22/178 (12%)
Query: 158 NKQVDGTNEHASAPAAKAQVVGWPPIRSFRKNT------------------MASNLTKNN 199
N +V + + A VVGWPPIRSFRKN M +N++
Sbjct: 78 NNKVTAVSNTSQKRTAPGPVVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGK 137
Query: 200 DEAEGKPGFGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLP 259
+ G G L+VK++MDG P RKVDL Y +Y SSA++ +F Q +S
Sbjct: 138 KPIDNNYGKG-LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACG 196
Query: 260 GKDGLSESS--LRDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSE 314
G + E + LL GS EY L YED +GD MLVGDVPW MF + +RLR++K +E
Sbjct: 197 GNNKKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:44155116-44156253 | 20130731
Length = 198
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 71/107 (66%), Gaps = 12/107 (11%)
Query: 210 CLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFS--CFTIGQCNSPGLPGKDGLSES 267
C YVKV++DGAPYLRKVDL+ Y+ Y +AL MFS CFTI D ++E
Sbjct: 86 CKYVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMFSTNCFTIRN---------DLMNEK 136
Query: 268 SLRDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGS 313
D + EY+ TYEDKDGDWML+GDVPW+MF +SC+R+R+M S
Sbjct: 137 KFMDSRKNTNEYLATYEDKDGDWMLLGDVPWKMFVESCKRIRLMISS 183
>Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 271
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 17/158 (10%)
Query: 173 AKAQVVGWPPIRSFRKNTMASNLTKNNDEAE-----------GKP----GFGCLYVKVSM 217
A + VVGWPPIRSFRKN + + +K E+ KP G G L+VK++M
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKG-LFVKINM 162
Query: 218 DGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGS- 276
DG P RK+D+ Y +Y + SSA++ +F S G+ K ++ ++ L GS
Sbjct: 163 DGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGSLTGSG 222
Query: 277 EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSE 314
EY L YED +GD MLVGDVPW MF + +RLR+ K S+
Sbjct: 223 EYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 268
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 17/158 (10%)
Query: 173 AKAQVVGWPPIRSFRKNTMASNLTKNNDEAE-----------GKP----GFGCLYVKVSM 217
A + VVGWPPIRSFRKN + + +K E+ KP G G L+VK++M
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKG-LFVKINM 162
Query: 218 DGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGS- 276
DG P RK+D+ Y +Y + SSA++ +F S G+ K ++ ++ L GS
Sbjct: 163 DGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGSLTGSG 222
Query: 277 EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSE 314
EY L YED +GD MLVGDVPW MF + +RLR+ K S+
Sbjct: 223 EYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:51327848-51326632 | 20130731
Length = 184
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 33/150 (22%)
Query: 170 APAAKAQV-----VGWPPI-RSFRKNTMASNLTKNNDEAEGKPGFGCLYVKVSMDGAPYL 223
+P++++Q+ WPPI +S ++T+A + +P L+VKV M+G P
Sbjct: 60 SPSSQSQLPREETCDWPPINKSILRSTLAE---------KQRPS---LFVKVYMEGIPIG 107
Query: 224 RKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYE 283
RK++L + +Y AL MF T C P L+ + +VLTYE
Sbjct: 108 RKLNLLEHHSYDGLIKALCHMFR--TTILC-----PNSQPLNSWNF--------HVLTYE 152
Query: 284 DKDGDWMLVGDVPWEMFTDSCRRLRIMKGS 313
D++GDWM+VGDVPWEMF S +RL+I + +
Sbjct: 153 DQEGDWMMVGDVPWEMFLSSVKRLKITRAN 182
>Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |
chr3:49381656-49382979 | 20130731
Length = 213
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 46/221 (20%)
Query: 102 VAGGSEVELGKGAALFSPRGGNVGKPLVALETQTNTTPAINEVAMAHQSAKPAQEKNKQV 161
+ G ++ K F G+ KPL P + ++ +++KN+ +
Sbjct: 29 IRGSENIKYVKNKRSFDESFGDFSKPL----------PLLVWSGQPNEEDGRSEKKNRSI 78
Query: 162 DGTNEHASAPAAKAQVVGWPPIRSFRK-----NTMASNLTKNNDEA--EGKPGFGCLYVK 214
H S + +VGWPPI+S+RK + ++ K N+ KP LYVK
Sbjct: 79 -----HTSNNEGENHLVGWPPIKSWRKKEFHDQQLPEHIRKANENQNRRSKP----LYVK 129
Query: 215 VSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLH 274
V+M+G R+++L+ Y +Y +L MF +C E+
Sbjct: 130 VNMEGVGMGRQINLRLYNSYQTLKDSLISMFV-----KC--------QNFEET------- 169
Query: 275 GSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEA 315
G+ Y LT+++K G+W L + W+ F + RRL I++ E
Sbjct: 170 GANYTLTFQNKQGEWKLTSHITWQSFIGTVRRLAILRNGEC 210
>Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:45409781-45408778 | 20130731
Length = 161
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 14/104 (13%)
Query: 208 FGCLYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSES 267
+ LYVKV M+G P RK+++ +++Y E LE MF TI N DG+
Sbjct: 66 YNSLYVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFDT-TILWGNE-----MDGVQPE 119
Query: 268 SLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMK 311
+VLTYED++GD ++VGDVPWEMF + +RL+I +
Sbjct: 120 RC--------HVLTYEDEEGDLVMVGDVPWEMFLSTVKRLKITR 155
>Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 176
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 211 LYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLR 270
+VKV M+G P RK++L + Y E + LE+MF + G+ SE
Sbjct: 84 FFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTILWGTEMDGVQ-----SERC-- 136
Query: 271 DLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMK 311
+VLTYED +GD ++VGDVPWEMF S +RL+I +
Sbjct: 137 -------HVLTYEDGEGDLIMVGDVPWEMFLSSVKRLKITR 170
>Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:47460828-47458972 | 20130731
Length = 208
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 30/139 (21%)
Query: 177 VVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCL----YVKVSMDGAPYLRKVDLKTYK 232
+VGWPP+ RK + +N+ E P G YVKV M+G RKV+L +
Sbjct: 93 LVGWPPVNCRRKKLRCN---ENDVEDHVVPIDGSHNHRNYVKVKMEGVGIARKVNLGMHH 149
Query: 233 NYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLV 292
++ + L MF +C+ +Y L Y+DK+GDW+L
Sbjct: 150 SFHTLNQTLMDMFE-----KCDHDQ------------------QQYELVYQDKEGDWLLA 186
Query: 293 GDVPWEMFTDSCRRLRIMK 311
D+ W F + +RL+++K
Sbjct: 187 QDISWRSFIECAQRLKLLK 205
>Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:49537832-49539058 | 20130731
Length = 178
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 22/146 (15%)
Query: 167 HASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEG-KPGFGCLYVKVSMDGAPYLRK 225
H+SA ++ WP +++ R ++ N ++E EG + YVKV+MDG RK
Sbjct: 44 HSSANLYDDDLMDWPNMKNSR--SVHENF---DEEIEGVQSNERWAYVKVNMDGVSIGRK 98
Query: 226 VDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDK 285
+ + + Y + LE MF ++ S +R GSEY L Y+D
Sbjct: 99 ICILDHGGYSSLAIQLEDMFGSQSV----------------SGIRLFESGSEYSLFYKDS 142
Query: 286 DGDWMLVGDVPWEMFTDSCRRLRIMK 311
+ +W VGDV W+ F + +RLRI +
Sbjct: 143 EDNWRTVGDVLWKEFVECVKRLRIAR 168
>Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 157
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 211 LYVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLR 270
+VKV M+G P RK++L + Y E + LE+MF + G+ SE
Sbjct: 84 FFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTILWGTEMDGVQ-----SERC-- 136
Query: 271 DLLHGSEYVLTYEDKDGDWMLVGDVPWE 298
+VLTYED +GD ++VGDVPWE
Sbjct: 137 -------HVLTYEDGEGDLIMVGDVPWE 157
>Medtr1g024025.1 | auxin response factor 2 | LC |
chr1:7778460-7771119 | 20130731
Length = 1265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 20/113 (17%)
Query: 212 YVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRD 271
Y KV G+ R +D+ T+KNY E A+E MF G DGL L D
Sbjct: 756 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF--------------GLDGL----LND 796
Query: 272 LLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAME 324
GS + L Y D + D +LVGD PWE F R +RI+ SE ++ M+
Sbjct: 797 T-KGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVKEMSEEGMK 848
>Medtr8g100050.1 | auxin response factor 2 | HC |
chr8:40230869-40235830 | 20130731
Length = 833
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 27/179 (15%)
Query: 154 AQEKNKQVDGTNEHA--SAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPGFGCL 211
+Q + D +EH+ S PA K +V K S + + + + G
Sbjct: 657 SQHHTFENDQKSEHSKSSKPADKLVIVD-----EHEKQLQTSQPHVKDVQLKPQSGSARS 711
Query: 212 YVKVSMDGAPYLRKVDLKTYKNYMEFSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRD 271
KV G R VDL + +Y E ++ L+++F G+ SP
Sbjct: 712 CTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEF--RGELISPQ-------------- 755
Query: 272 LLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 330
++++ + D +GD MLVGD PW+ F R++ I E ++P + +N
Sbjct: 756 ----KDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGTLSSKNEEN 810