Miyakogusa Predicted Gene

Lj0g3v0159519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159519.1 Non Characterized Hit- tr|D8U6F9|D8U6F9_VOLCA
Putative uncharacterized protein (Fragment) OS=Volvox ,29.55,1e-16,
,NODE_10511_length_1185_cov_172.411819.path2.1
         (361 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g069760.1 | alpha-glucan water dikinase | HC | chr8:294101...   543   e-155
Medtr8g468990.3 | alpha amylase domain protein | HC | chr8:25017...    49   6e-06
Medtr8g468990.1 | alpha amylase domain protein | HC | chr8:25017...    49   7e-06
Medtr8g468990.2 | alpha amylase domain protein | HC | chr8:25017...    49   7e-06

>Medtr8g069760.1 | alpha-glucan water dikinase | HC |
           chr8:29410196-29393554 | 20130731
          Length = 1483

 Score =  543 bits (1400), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/376 (73%), Positives = 311/376 (82%), Gaps = 18/376 (4%)

Query: 1   MSHSIFHQTLLCQTQTVAEHQSK--VSSRGSTLFPAL-SVSKGKKLVLSTNLRGN-RLCL 56
           MSHS+FHQTLLCQT TVAEHQSK  V    STLF +  SV K KKL LSTN RGN    +
Sbjct: 1   MSHSVFHQTLLCQTSTVAEHQSKRGVIGNSSTLFQSQQSVDKEKKLFLSTNFRGNPSFFV 60

Query: 57  RKRRFAMGRNRNTVAIPRAVLTSNAASELSGKFNLDGNIELQVGVSSSGPGGATQVDIQV 116
           RKR+ AMG  +    +PRAVLTSNAAS+LS KFNL+GNIELQV V SSG G ATQVDIQ+
Sbjct: 61  RKRKVAMGSKQT---VPRAVLTSNAASQLSEKFNLEGNIELQVNVGSSGSGAATQVDIQL 117

Query: 117 SNKSGSLILHWGVLHESQGKWVLPSRHPDGTQVYKNRALRTPFVKSGSGSFLKIEIDDPA 176
           SN SGS++LHWGV+ ESQGKWVLPSR PDGTQVYKNRALRT F KSGSGS LKIEIDDPA
Sbjct: 118 SNTSGSMVLHWGVICESQGKWVLPSRRPDGTQVYKNRALRTHFAKSGSGSLLKIEIDDPA 177

Query: 177 AQAIEFLILDESQNKWFKNNGENFHIKLPGKDEGVQQGSVPEDLVQVQAYLRWERNGKQM 236
           AQAIEFLI+DE+QNKW+KNNG NFHIKLP KD+  QQ SVPEDLVQ+QAY+RWER GKQ 
Sbjct: 178 AQAIEFLIVDEAQNKWYKNNGGNFHIKLPVKDKVAQQVSVPEDLVQIQAYIRWERKGKQS 237

Query: 237 YTPEKEKEEYEAARQDLLKEVARGISVQDLRARLTNKANTAEVKQP-----------SVS 285
           Y+PE+EKEEYEAAR++LL+EVARG SVQD+RARLTNK+N  EVK+P           S S
Sbjct: 238 YSPEQEKEEYEAARRELLEEVARGTSVQDIRARLTNKSNDVEVKEPNKANAAEVKGSSAS 297

Query: 286 GTKNIPDELAQVQAYIRWEKAGKPNYSPEQQLIEFEEARKELLGELEKGASLDEIRKKIV 345
            TK IPDEL Q+QA++RWEKAGKPNYSPEQQLIEFEEARKEL  ELEKGAS+DEI+KKI 
Sbjct: 298 KTKTIPDELVQIQAFLRWEKAGKPNYSPEQQLIEFEEARKELQAELEKGASVDEIQKKIA 357

Query: 346 KGEVQTKVAKQLKTKK 361
           KGE++TKV+KQLK K+
Sbjct: 358 KGEIKTKVSKQLKNKQ 373



 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 14/110 (12%)

Query: 107 GGATQVDIQVSNKSGSLILHWGVLHESQGKWVLP--SRHPDGTQVYKNRALRTPFVKSGS 164
           GG  +V +    K+ + I+HW +   + G+W+ P  S  P G+ V  ++A  TPF K+GS
Sbjct: 457 GGKIKVHLATDYKTPA-IVHWALSRTTPGEWLAPPASSLPPGS-VIMDKAAETPF-KAGS 513

Query: 165 GS-------FLKIEIDDPAAQAIEFLILDESQNKWFKNNGENFHIKLPGK 207
            S        L IE+ D   + + F+IL  S  KW KN+G +F I+  GK
Sbjct: 514 SSDPFSEVQSLDIEVSDDTFRGLTFVIL--SDGKWLKNSGSDFSIEFGGK 561


>Medtr8g468990.3 | alpha amylase domain protein | HC |
           chr8:25017230-25009440 | 20130731
          Length = 764

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 121 GSLILHWGVLHESQGKW-VLPSRHPDGTQVYKNRALRTPFVKSGSGSFLKIEIDDPAAQA 179
           G++ LHWGV  +    W   P+ HP  T  YK+  LRT     GSG     +I      +
Sbjct: 170 GNIFLHWGVCRDDLRSWEAPPAPHPPQTVAYKDTVLRTQLKPKGSGEGSSAQISLGEEFS 229

Query: 180 IEFLILDESQNKWFKNNGENFHIKL 204
               +L  ++N W  N G +F++ L
Sbjct: 230 GFLFLLKINENSWLNNKGIDFYVPL 254


>Medtr8g468990.1 | alpha amylase domain protein | HC |
           chr8:25017934-25009440 | 20130731
          Length = 913

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 121 GSLILHWGVLHESQGKW-VLPSRHPDGTQVYKNRALRTPFVKSGSGSFLKIEIDDPAAQA 179
           G++ LHWGV  +    W   P+ HP  T  YK+  LRT     GSG     +I      +
Sbjct: 319 GNIFLHWGVCRDDLRSWEAPPAPHPPQTVAYKDTVLRTQLKPKGSGEGSSAQISLGEEFS 378

Query: 180 IEFLILDESQNKWFKNNGENFHIKL 204
               +L  ++N W  N G +F++ L
Sbjct: 379 GFLFLLKINENSWLNNKGIDFYVPL 403


>Medtr8g468990.2 | alpha amylase domain protein | HC |
           chr8:25017934-25009440 | 20130731
          Length = 823

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 121 GSLILHWGVLHESQGKW-VLPSRHPDGTQVYKNRALRTPFVKSGSGSFLKIEIDDPAAQA 179
           G++ LHWGV  +    W   P+ HP  T  YK+  LRT     GSG     +I      +
Sbjct: 319 GNIFLHWGVCRDDLRSWEAPPAPHPPQTVAYKDTVLRTQLKPKGSGEGSSAQISLGEEFS 378

Query: 180 IEFLILDESQNKWFKNNGENFHIKL 204
               +L  ++N W  N G +F++ L
Sbjct: 379 GFLFLLKINENSWLNNKGIDFYVPL 403