Miyakogusa Predicted Gene

Lj0g3v0158289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0158289.1 Non Characterized Hit- tr|I1JUC2|I1JUC2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6226
PE=,53.85,0.00000000002,seg,NULL,
NODE_18479_length_243_cov_296.135803.path1.1
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g106900.2 | clathrin assembly plant-like protein, putative...    46   8e-06
Medtr3g106900.1 | clathrin assembly plant-like protein, putative...    46   8e-06

>Medtr3g106900.2 | clathrin assembly plant-like protein, putative |
           HC | chr3:49401713-49404604 | 20130731
          Length = 641

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 39  DNFRSPPYEYESGGFRGESGYGNNGMRRTRSFGDMTETAGREDNNKKVVTPL 90
           +NFRSPP EYE   + G    G  GMR+TRS+GD+ E +G +D     VTPL
Sbjct: 178 NNFRSPPNEYE---YGGGQFRGEGGMRKTRSYGDVNEASGNDDRRIVTVTPL 226


>Medtr3g106900.1 | clathrin assembly plant-like protein, putative |
           HC | chr3:49401686-49404604 | 20130731
          Length = 641

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 39  DNFRSPPYEYESGGFRGESGYGNNGMRRTRSFGDMTETAGREDNNKKVVTPL 90
           +NFRSPP EYE   + G    G  GMR+TRS+GD+ E +G +D     VTPL
Sbjct: 178 NNFRSPPNEYE---YGGGQFRGEGGMRKTRSYGDVNEASGNDDRRIVTVTPL 226