Miyakogusa Predicted Gene

Lj0g3v0156919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0156919.1 tr|F2SIS2|F2SIS2_TRIRC Syntaxin 5 OS=Trichophyton
rubrum (strain ATCC MYA-4607 / CBS 118892) GN=TERG,37.08,1e-18,no
description,NULL; SYNTAXIN 5,NULL; SYNTAXIN,NULL; t-snare
proteins,t-SNARE; Syntaxin,Syntaxin, N-,CUFF.9692.1
         (174 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g093600.1 | syntaxin of plants protein | HC | chr5:4087882...   276   8e-75
Medtr5g093600.2 | syntaxin of plants protein | HC | chr5:4087882...   172   1e-43
Medtr3g108160.1 | syntaxin of plants protein | HC | chr3:4998319...   167   7e-42
Medtr3g108160.2 | syntaxin of plants protein | HC | chr3:4998319...   166   8e-42

>Medtr5g093600.1 | syntaxin of plants protein | HC |
           chr5:40878820-40872415 | 20130731
          Length = 334

 Score =  276 bits (706), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 142/174 (81%), Positives = 154/174 (88%), Gaps = 8/174 (4%)

Query: 1   MASTYRDRTSEFRSLTETLKKIGG----ATAPRNQPENAPATSQASSYSRSEFNRKASRI 56
           MASTYRDRTSEFRSLTETLKKIGG    ATAP NQ    P+TSQ S YSRS+FNRKAS+I
Sbjct: 1   MASTYRDRTSEFRSLTETLKKIGGGGGGATAPPNQ---QPSTSQIS-YSRSDFNRKASQI 56

Query: 57  GLGIHETSQKIARLAQLAKKSSMFNDPMVEIQELTGLIKNDITALNSALSDLQNIQQMDM 116
           GLGIHETSQKIARLA+LAKKSSMFNDP++EIQELT LIK DIT LNSA+ DLQNIQ++D+
Sbjct: 57  GLGIHETSQKIARLAKLAKKSSMFNDPIMEIQELTALIKTDITTLNSAVLDLQNIQKIDL 116

Query: 117 AEGNYSEDRSVHSTAVCDDLKGRLMGATKHLQDVLTARTENIKAHENRRQIFSK 170
           A+ NYSEDR VHS AVCDDLK RLMGATKHLQDVLT RTENIKAHENR+QIFSK
Sbjct: 117 ADENYSEDRVVHSNAVCDDLKNRLMGATKHLQDVLTTRTENIKAHENRKQIFSK 170


>Medtr5g093600.2 | syntaxin of plants protein | HC |
           chr5:40878820-40872452 | 20130731
          Length = 268

 Score =  172 bits (437), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/98 (81%), Positives = 89/98 (90%)

Query: 73  LAKKSSMFNDPMVEIQELTGLIKNDITALNSALSDLQNIQQMDMAEGNYSEDRSVHSTAV 132
           +AKKSSMFNDP++EIQELT LIK DIT LNSA+ DLQNIQ++D+A+ NYSEDR VHS AV
Sbjct: 7   VAKKSSMFNDPIMEIQELTALIKTDITTLNSAVLDLQNIQKIDLADENYSEDRVVHSNAV 66

Query: 133 CDDLKGRLMGATKHLQDVLTARTENIKAHENRRQIFSK 170
           CDDLK RLMGATKHLQDVLT RTENIKAHENR+QIFSK
Sbjct: 67  CDDLKNRLMGATKHLQDVLTTRTENIKAHENRKQIFSK 104


>Medtr3g108160.1 | syntaxin of plants protein | HC |
           chr3:49983199-49979202 | 20130731
          Length = 336

 Score =  167 bits (422), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 98/183 (53%), Positives = 128/183 (69%), Gaps = 11/183 (6%)

Query: 3   STYRDRTSEFRSLTETLKK-IGGATAPRNQPENAPATSQASSYS----------RSEFNR 51
           S++RDRT EF ++ E LKK +   +AP     +AP++S  SS            +SEFNR
Sbjct: 8   SSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVAIQSEFNR 67

Query: 52  KASRIGLGIHETSQKIARLAQLAKKSSMFNDPMVEIQELTGLIKNDITALNSALSDLQNI 111
           +AS+IG GIH+TSQK+++LA+LAK++S+F+DP +EIQELT +IK DITALNSA+ DLQ I
Sbjct: 68  RASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLI 127

Query: 112 QQMDMAEGNYSEDRSVHSTAVCDDLKGRLMGATKHLQDVLTARTENIKAHENRRQIFSKT 171
                  GN S D + HST V DDLK RLM  TK  +DVLT RTEN+K HENRRQ+FS  
Sbjct: 128 SNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSAN 187

Query: 172 AAR 174
           A++
Sbjct: 188 ASK 190


>Medtr3g108160.2 | syntaxin of plants protein | HC |
           chr3:49983199-49979214 | 20130731
          Length = 301

 Score =  166 bits (421), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/183 (53%), Positives = 128/183 (69%), Gaps = 11/183 (6%)

Query: 3   STYRDRTSEFRSLTETLKK-IGGATAPRNQPENAPATSQASSYS----------RSEFNR 51
           S++RDRT EF ++ E LKK +   +AP     +AP++S  SS            +SEFNR
Sbjct: 8   SSFRDRTHEFLTVAERLKKSVSSGSAPNGATTSAPSSSFPSSSRSDDPRSAVAIQSEFNR 67

Query: 52  KASRIGLGIHETSQKIARLAQLAKKSSMFNDPMVEIQELTGLIKNDITALNSALSDLQNI 111
           +AS+IG GIH+TSQK+++LA+LAK++S+F+DP +EIQELT +IK DITALNSA+ DLQ I
Sbjct: 68  RASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLI 127

Query: 112 QQMDMAEGNYSEDRSVHSTAVCDDLKGRLMGATKHLQDVLTARTENIKAHENRRQIFSKT 171
                  GN S D + HST V DDLK RLM  TK  +DVLT RTEN+K HENRRQ+FS  
Sbjct: 128 SNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSAN 187

Query: 172 AAR 174
           A++
Sbjct: 188 ASK 190