Miyakogusa Predicted Gene

Lj0g3v0156359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0156359.1 CUFF.9664.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g022470.1 | hypothetical protein | LC | chr6:7852649-78539...    63   9e-11
Medtr3g436320.1 | hypothetical protein | LC | chr3:12205964-1220...    60   8e-10
Medtr6g462630.1 | hypothetical protein | LC | chr6:21777285-2177...    57   6e-09
Medtr2g461790.1 | hypothetical protein | LC | chr2:25561343-2556...    52   2e-07
Medtr5g081480.1 | hypothetical protein | LC | chr5:34898739-3489...    51   3e-07
Medtr2g048835.1 | hypothetical protein | LC | chr2:21544236-2154...    49   2e-06

>Medtr6g022470.1 | hypothetical protein | LC | chr6:7852649-7853932
           | 20130731
          Length = 279

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 12/101 (11%)

Query: 1   MISLINRVKQLEPRAKTVELFPPEYKSGPERPKKLRSRDPIED-GDTTRVSKARTRIKCT 59
           +IS IN   +  P+   VE+ PP YK GP RPKKLR R+P ED  +  +  +  T  +C 
Sbjct: 61  VISPINGQNKW-PKTDFVEVLPPIYKRGPGRPKKLRRREPDEDRMENGKWQRGYTTNRCK 119

Query: 60  RCYGYGHNVRTCKKNPPQSANEIGEGSGIQAQTTDGSATQA 100
           +C  YGHN RTC          I     +  QT+  SAT A
Sbjct: 120 KCLHYGHNQRTC----------INPAVVVPTQTSQTSATPA 150


>Medtr3g436320.1 | hypothetical protein | LC |
           chr3:12205964-12205098 | 20130731
          Length = 168

 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 13  PRAKTVELFPPEYKSGPERPKKLRSRDPIEDGDTTRVSKARTRIKCTRCYGYGHNVRTCK 72
           P+     + PPEYK GP RPKKLR R+  E  +  R  +  T  +C RC  YGHN RTCK
Sbjct: 66  PKTNDPVILPPEYKRGPGRPKKLRRREQNE-ANQPRWRRTNTTHRCKRCLQYGHNARTCK 124


>Medtr6g462630.1 | hypothetical protein | LC |
           chr6:21777285-21775376 | 20130731
          Length = 215

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 11  LEPRAKTVELFPPEYKSGPERPKKLRSRDPIEDGDTTRVSKARTRIKCTRCYGYGHNVRT 70
           L  R +  +L PP  K  P RPKK R+RDP E  D  ++ +AR  +KC+RC   GHN  T
Sbjct: 91  LWERTEYADLQPPPIKRQPCRPKKKRTRDPNELLDHNQMKRARWGMKCSRCKQSGHNKST 150

Query: 71  CKKNPPQSANEIGEGSGIQ 89
           CK  PP  A+     S +Q
Sbjct: 151 CKL-PPLPASYAPATSTVQ 168


>Medtr2g461790.1 | hypothetical protein | LC |
           chr2:25561343-25560765 | 20130731
          Length = 192

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 36/64 (56%)

Query: 18  VELFPPEYKSGPERPKKLRSRDPIEDGDTTRVSKARTRIKCTRCYGYGHNVRTCKKNPPQ 77
            +L PP  K    RPKK R+RD  E  D  ++ +A+  IKC+RC   GHN  TCK  PP 
Sbjct: 44  ADLQPPPIKRQAGRPKKKRNRDANEMLDANQMKRAKWGIKCSRCKHSGHNKSTCKLPPPP 103

Query: 78  SANE 81
             +E
Sbjct: 104 PTSE 107


>Medtr5g081480.1 | hypothetical protein | LC |
           chr5:34898739-34895435 | 20130731
          Length = 939

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 9   KQLEPRAKTVELFPPEYKSGPERPKKLRSRDPIE-DGDTTRVSKARTRIKCTRCYGYGHN 67
           + L  R    +L PP  +  P RPKK R+++  E   D T++ +AR  +KC+RC   GHN
Sbjct: 711 QSLWKRTDYNDLQPPPIRKQPGRPKKKRNKEAHELVKDDTQMRRARWGMKCSRCKQSGHN 770

Query: 68  VRTCKKNPPQSANEIGEGSGIQAQTTDGSATQAQTADGFATHAQTAHGSATPPQIVSGSG 127
             TCK  PP +     EGS   A + +GS+TQ    +   +  Q +   A P Q+   +G
Sbjct: 771 KSTCKLPPPPTT----EGSSNPA-SGEGSSTQPAQVN---SQPQPSSQDAQPTQV---TG 819

Query: 128 TQEQPASVVFR 138
           T   P   V R
Sbjct: 820 TTHPPTQRVAR 830


>Medtr2g048835.1 | hypothetical protein | LC |
           chr2:21544236-21542626 | 20130731
          Length = 486

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/62 (43%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 16  KTVELFPPEYKSGPERPKKLRSRDPIE-DGDTTRVSKARTRIKCTRCYGYGHNVRTCKKN 74
           K  +  PP  K  P RPKK R  D  E  GD  ++ +A   IKC+RC   GHN  TC   
Sbjct: 368 KCTDFQPPPVKRQPGRPKKKRRLDASELMGDEKQMKRASYGIKCSRCKQTGHNKSTCTLP 427

Query: 75  PP 76
           PP
Sbjct: 428 PP 429