Miyakogusa Predicted Gene
- Lj0g3v0156319.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0156319.1 tr|D7MRE6|D7MRE6_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,34.21,5e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,CUFF.9654.1
(245 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 239 2e-63
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 222 3e-58
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 149 2e-36
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 149 3e-36
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 148 4e-36
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 142 4e-34
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 137 1e-32
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 135 3e-32
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 129 2e-30
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 128 4e-30
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 127 1e-29
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 126 2e-29
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 126 2e-29
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 126 2e-29
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 126 2e-29
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 3e-29
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 120 2e-27
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 119 3e-27
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 117 1e-26
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 2e-26
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 2e-26
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 115 5e-26
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 115 5e-26
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 115 5e-26
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 114 9e-26
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 114 9e-26
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 1e-25
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 1e-25
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 111 5e-25
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 111 6e-25
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 111 8e-25
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 110 1e-24
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 108 4e-24
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 2e-23
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 106 2e-23
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 105 3e-23
Medtr3g052720.1 | organelle transcript processing protein, putat... 105 3e-23
Medtr5g006420.1 | organelle transcript processing protein, putat... 104 7e-23
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 104 7e-23
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 2e-22
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 102 2e-22
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 102 3e-22
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 102 4e-22
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 5e-22
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 100 1e-21
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 100 2e-21
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 99 3e-21
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 99 3e-21
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 99 5e-21
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 2e-20
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 96 3e-20
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 3e-20
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 96 3e-20
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 3e-20
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 95 5e-20
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 5e-20
Medtr4g113830.1 | organelle transcript processing protein, putat... 95 6e-20
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 6e-20
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 95 6e-20
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 95 6e-20
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 95 6e-20
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 94 9e-20
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 94 9e-20
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 9e-20
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 93 2e-19
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 93 2e-19
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 2e-19
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 2e-19
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 93 3e-19
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 3e-19
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 92 3e-19
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 92 3e-19
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 4e-19
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 92 4e-19
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 92 5e-19
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 92 5e-19
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 92 6e-19
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 92 6e-19
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 90 2e-18
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 90 2e-18
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 90 2e-18
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 90 2e-18
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 90 2e-18
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 2e-18
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 90 2e-18
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 90 2e-18
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 90 2e-18
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 90 2e-18
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 90 2e-18
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 90 2e-18
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 2e-18
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 90 3e-18
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 3e-18
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 89 3e-18
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 89 3e-18
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 89 3e-18
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 89 3e-18
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 89 3e-18
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 3e-18
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 89 4e-18
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 89 4e-18
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 89 4e-18
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 4e-18
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 89 4e-18
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 5e-18
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 89 5e-18
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 5e-18
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 5e-18
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 6e-18
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 88 7e-18
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 1e-17
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 1e-17
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 1e-17
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 1e-17
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 87 1e-17
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 87 2e-17
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 2e-17
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 86 2e-17
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 2e-17
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 86 3e-17
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 3e-17
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 3e-17
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 86 3e-17
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 86 3e-17
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 86 3e-17
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 4e-17
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 86 4e-17
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 4e-17
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 5e-17
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 85 5e-17
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 5e-17
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 6e-17
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 7e-17
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 7e-17
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 85 7e-17
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 7e-17
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 84 1e-16
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 84 1e-16
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 2e-16
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 2e-16
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 83 2e-16
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 2e-16
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 2e-16
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 83 2e-16
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 83 2e-16
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 83 3e-16
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 83 3e-16
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 83 3e-16
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 82 3e-16
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 82 3e-16
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 82 3e-16
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 3e-16
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 82 3e-16
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 82 4e-16
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 82 4e-16
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 4e-16
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 82 4e-16
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 5e-16
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 5e-16
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 82 5e-16
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 6e-16
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 7e-16
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 81 7e-16
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 8e-16
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 81 8e-16
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 8e-16
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 81 8e-16
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 81 8e-16
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 81 8e-16
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 8e-16
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 81 8e-16
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 1e-15
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 1e-15
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 80 1e-15
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 80 1e-15
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 80 1e-15
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 2e-15
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 80 2e-15
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 80 2e-15
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 80 2e-15
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 80 2e-15
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 80 2e-15
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 80 2e-15
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 80 2e-15
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 2e-15
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 80 2e-15
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 80 2e-15
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 80 2e-15
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 80 2e-15
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 80 2e-15
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 80 2e-15
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 79 3e-15
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 79 3e-15
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 79 3e-15
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 79 3e-15
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 3e-15
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 79 3e-15
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 79 3e-15
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 79 5e-15
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 79 5e-15
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 79 5e-15
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 5e-15
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 79 5e-15
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 79 6e-15
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 78 6e-15
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 78 6e-15
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 6e-15
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 78 6e-15
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 6e-15
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 78 6e-15
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 78 7e-15
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 78 7e-15
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 78 7e-15
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 7e-15
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 9e-15
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 1e-14
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 77 1e-14
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 77 1e-14
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 77 1e-14
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 77 1e-14
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 77 1e-14
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 77 2e-14
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 77 2e-14
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 77 2e-14
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 76 2e-14
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 2e-14
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 76 3e-14
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 76 3e-14
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 76 4e-14
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 4e-14
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 4e-14
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 75 4e-14
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 75 4e-14
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 75 4e-14
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 75 4e-14
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 75 4e-14
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 5e-14
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 75 5e-14
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 75 5e-14
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 5e-14
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 75 5e-14
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 5e-14
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 5e-14
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 75 5e-14
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 75 5e-14
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 75 6e-14
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 75 6e-14
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 6e-14
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 6e-14
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 7e-14
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 75 7e-14
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 75 7e-14
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 75 8e-14
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 8e-14
Medtr1g059720.1 | organelle transcript processing protein, putat... 75 8e-14
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 8e-14
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 74 8e-14
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 9e-14
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 74 1e-13
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 74 1e-13
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 74 1e-13
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 74 1e-13
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 74 2e-13
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 73 2e-13
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 73 2e-13
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 73 2e-13
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 73 2e-13
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 73 2e-13
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 73 2e-13
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 3e-13
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 73 3e-13
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 3e-13
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 72 3e-13
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 72 4e-13
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 72 4e-13
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 72 5e-13
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 72 5e-13
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 5e-13
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 6e-13
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 72 6e-13
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 72 7e-13
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 72 7e-13
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 71 7e-13
Medtr3g117150.1 | organelle transcript processing protein, putat... 71 8e-13
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 8e-13
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 71 9e-13
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 71 9e-13
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 71 1e-12
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 70 1e-12
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 70 1e-12
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 70 1e-12
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 1e-12
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 70 1e-12
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 70 2e-12
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 2e-12
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 70 2e-12
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 3e-12
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 70 3e-12
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 70 3e-12
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 69 3e-12
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 3e-12
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 69 3e-12
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 69 3e-12
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 69 4e-12
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 4e-12
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 69 4e-12
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 69 4e-12
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 4e-12
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 69 4e-12
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 69 5e-12
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 69 5e-12
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 5e-12
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 68 6e-12
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 68 6e-12
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 68 6e-12
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 7e-12
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 7e-12
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 68 7e-12
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 68 8e-12
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 68 8e-12
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 8e-12
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 68 9e-12
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 68 9e-12
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 1e-11
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 67 1e-11
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 67 1e-11
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 1e-11
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 67 1e-11
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 1e-11
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 67 1e-11
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 67 1e-11
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 67 2e-11
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 67 2e-11
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 67 2e-11
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 2e-11
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 67 2e-11
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 67 2e-11
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 67 2e-11
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 67 2e-11
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 67 2e-11
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 66 2e-11
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 3e-11
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 66 3e-11
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 66 3e-11
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 66 3e-11
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 66 3e-11
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 66 3e-11
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 65 4e-11
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 65 5e-11
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 6e-11
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 65 6e-11
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 65 7e-11
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 65 7e-11
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 65 8e-11
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 8e-11
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 9e-11
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 9e-11
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 64 1e-10
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 64 1e-10
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 64 1e-10
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 64 1e-10
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 64 1e-10
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 1e-10
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 64 1e-10
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 64 1e-10
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 64 2e-10
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 2e-10
Medtr4g123860.1 | PPR containing plant-like protein | HC | chr4:... 63 2e-10
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 63 2e-10
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 63 2e-10
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 63 2e-10
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 3e-10
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 63 3e-10
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 63 3e-10
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 63 3e-10
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 63 3e-10
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 63 3e-10
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 62 3e-10
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 4e-10
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 5e-10
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 62 5e-10
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 62 5e-10
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 6e-10
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 62 7e-10
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 61 9e-10
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 61 9e-10
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 61 1e-09
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 61 1e-09
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 61 1e-09
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 61 1e-09
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 61 1e-09
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 60 1e-09
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 60 1e-09
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 60 2e-09
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 60 2e-09
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 59 3e-09
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 3e-09
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 59 3e-09
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 59 4e-09
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 59 4e-09
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 59 4e-09
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 59 5e-09
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 59 5e-09
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 59 5e-09
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 58 6e-09
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 58 6e-09
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 6e-09
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 58 7e-09
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 58 8e-09
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 9e-09
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 58 1e-08
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 58 1e-08
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 57 1e-08
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 57 1e-08
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 57 1e-08
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 57 2e-08
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 57 2e-08
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 57 2e-08
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 57 2e-08
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 56 3e-08
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 56 3e-08
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 56 4e-08
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 55 4e-08
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 55 4e-08
Medtr5g043790.1 | PPR repeat protein | LC | chr5:19242401-192435... 55 4e-08
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 55 4e-08
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 55 4e-08
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 5e-08
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 55 5e-08
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:... 55 5e-08
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 55 6e-08
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 55 6e-08
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 55 7e-08
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 8e-08
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 8e-08
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 55 8e-08
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 55 8e-08
Medtr7g069230.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 54 1e-07
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 54 2e-07
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 54 2e-07
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 54 2e-07
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 54 2e-07
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/249 (52%), Positives = 166/249 (66%), Gaps = 42/249 (16%)
Query: 1 MAKKLPPLSFILMHAHKLN-THPLIHGYPF---LRTRLASTFSLNTEMKRCNSFISRLCK 56
M K LS I ++ KL TH YPF LR R +ST +L +EMKRCN FIS+LC+
Sbjct: 1 MNKFYYHLSHIFINLPKLKITHCY---YPFQNNLRIRSSSTATLTSEMKRCNYFISKLCR 57
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY 116
EG+ + EARK+FD+M++RD+ LWTTM++GY
Sbjct: 58 EGK-------------------------------VNEARKVFDEMSKRDSCLWTTMISGY 86
Query: 117 IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM 176
I+CG+I EARKLFD PDA+KSV W+ MV+GY+K+N+IEEAERLF EMP R VSWN M+
Sbjct: 87 IKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMI 146
Query: 177 GGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
GY +NG+ ++ALDLF RM PERNVVSWNT++ AL CGRI+DA+ FN+M RERDV
Sbjct: 147 DGYARNGRTQEALDLFGRM--PERNVVSWNTVMTALAHCGRIDDAERLFNEM--RERDVV 202
Query: 237 SWTTIVDCL 245
SWTT+V L
Sbjct: 203 SWTTMVAGL 211
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 102/181 (56%), Gaps = 5/181 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ L GR D A ++F++M ERD+ W TM+ G K G + AR++FD+M R+
Sbjct: 174 NTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVV 233
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W M+ GY + G EA KLF+ E+ + +W+TMV G+++ + AE+LF+ MP++
Sbjct: 234 SWNAMIAGYAQNGRFDEALKLFERM-PERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQK 292
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC----GRIEDAQW 223
++W MM GY Q+G E+AL LF +M + + T + L C G E Q
Sbjct: 293 NVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQI 352
Query: 224 H 224
H
Sbjct: 353 H 353
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 43/224 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ + GR D A K+F++MPERDM W+TM+ G+I+ G + A +LF M +++
Sbjct: 236 NAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVI 295
Query: 108 LWTTMLNGYIECGMIKEARKLF------DG---------------------PDAEK---- 136
WT M+ GY++ G+ +EA KLF DG P+ ++
Sbjct: 296 TWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQM 355
Query: 137 --------SVSTWSTMVNGYVKINQIEEAERLFYE-MPERKD-VSWNIMMGGYGQNGQIE 186
S S ++N Y K A+++F + + D ++WN M+ Y +G
Sbjct: 356 ISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGN 415
Query: 187 KALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+A++LF +M E + N V++ ++ A G ++ +F+++
Sbjct: 416 EAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDEL 459
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/202 (56%), Positives = 141/202 (69%), Gaps = 35/202 (17%)
Query: 44 MKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
MKRCN FIS+LC+EG+ I EARK+FD+M+E
Sbjct: 1 MKRCNYFISKLCREGQ-------------------------------INEARKVFDEMSE 29
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
RD+ LWTTM++GYI+CG+I EARKLFD DAEKSV W+ MV+GY+KIN+IEEAERLF E
Sbjct: 30 RDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVSGYIKINRIEEAERLFNE 89
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQW 223
MP R VSWN M+ GY +NG+ ++A+DLF RM PERNVVSWNT++ AL CGRI+DA+
Sbjct: 90 MPVRNVVSWNTMIDGYARNGRTQEAMDLFGRM--PERNVVSWNTVMTALAHCGRIDDAER 147
Query: 224 HFNQMQERERDVSSWTTIVDCL 245
FN+M RERDV SWTT+V L
Sbjct: 148 LFNEM--RERDVVSWTTMVAGL 167
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ L GR D A ++F++M ERD+ W TM+ G K G + +AR +FD+M R+
Sbjct: 130 NTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVV 189
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W M+ GY + G EA KLF+ E+ + +W+TMV G+++ + AE+LF+ MP++
Sbjct: 190 SWNAMIAGYAQNGRFDEALKLFERM-PERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKK 248
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
++W MM GY Q+G E+AL LF +M + + T + L C
Sbjct: 249 NVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGAC 296
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ + GR D A K+F++MPERDM W+TM+ G+I+ G + A KLF M +++
Sbjct: 192 NAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVI 251
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDA----EKSVSTWSTMVNGYVKINQIEEAERLFYE 163
WT M+ GY++ G+ +EA KLF+ A + + T+ T++ + + E +++
Sbjct: 252 TWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQM 311
Query: 164 MP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+ + + ++ Y + G A +F ++++WN +I A G
Sbjct: 312 ISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGN 371
Query: 220 DAQWHFNQMQE---RERDVSSWTTIVDC 244
+A FN+MQE + DV+ + C
Sbjct: 372 EAIILFNKMQELGFQANDVTYVGLLTAC 399
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
+M N+ ++ + G + A K+F MP++++ W M+ GY++ G+ +EA KLF++M
Sbjct: 218 DMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQ 277
Query: 103 ERD-----TRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQI 154
D T + T+L + + E +++ ++S S ++N Y K
Sbjct: 278 ANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDF 337
Query: 155 EEAERLFYE-MPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A+++F + + D ++WN M+ Y +G +A+ LF +M E + N V++ ++
Sbjct: 338 HVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLT 397
Query: 211 ALVRCGRIEDAQWHFNQ------MQERERDVSSWTTIVD 243
A G ++ +F++ MQ RE +T ++D
Sbjct: 398 ACSHAGLFDEGFKYFDELLKNRYMQVRE---DHYTCLID 433
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 138/222 (62%), Gaps = 14/222 (6%)
Query: 26 GYPF---LRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQ--MPERDMRLWDT 80
GY + LR R+ SL + S ISR + G +ARKVFD +P+R + W+
Sbjct: 2 GYGYAATLRCRMVQARSLCSN----TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNA 57
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST 140
M++ Y + ++A LFDQM +R+T + M++GY++ GM+ +ARK+FD E++V +
Sbjct: 58 MVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFD-VMPERNVVS 116
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER 200
W++MV GYV+ +EEAE+LF+EMP R VSW +M+GG + +I+ A LF + PE+
Sbjct: 117 WTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMI--PEK 174
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+VV +I + GR+++A+ F++M + R+V +WTT+V
Sbjct: 175 DVVVVTNMIGGYCQVGRLDEARELFDEM--KVRNVFTWTTMV 214
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 125/196 (63%), Gaps = 7/196 (3%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ +S + + A +FDQMP+R+ ++ MI+GY+K GM+ +ARK+FD M ER+
Sbjct: 56 NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVV 115
Query: 108 LWTTMLNGYIECGMIKEARKLF-DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
WT+M+ GY++ GM++EA KLF + P ++V +W+ M+ G +K ++I++A++LF +PE
Sbjct: 116 SWTSMVRGYVQEGMVEEAEKLFWEMP--RRNVVSWTVMIGGLLKESRIDDAKKLFDMIPE 173
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
+ V M+GGY Q G++++A +LF M RNV +W T++ + GR++ A+ F
Sbjct: 174 KDVVVVTNMIGGYCQVGRLDEARELFDEM--KVRNVFTWTTMVSGYAKNGRVDVARKLFE 231
Query: 227 QMQERERDVSSWTTIV 242
M ER SWT ++
Sbjct: 232 VMPERNE--VSWTAML 245
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 107/181 (59%), Gaps = 3/181 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N IS K G ARKVFD MPER++ W +M+ GY++ GM++EA KLF +M R+
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT M+ G ++ I +A+KLFD EK V + M+ GY ++ +++EA LF EM R
Sbjct: 147 SWTVMIGGLLKESRIDDAKKLFD-MIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVR 205
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+W M+ GY +NG+++ A LF M PERN VSW ++ + GR+++A F
Sbjct: 206 NVFTWTTMVSGYAKNGRVDVARKLFEVM--PERNEVSWTAMLMGYTQSGRMKEAFELFEA 263
Query: 228 M 228
M
Sbjct: 264 M 264
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWT 110
I L KE R D A+K+FD +PE+D+ + MI GY + G + EAR+LFD+M R+ WT
Sbjct: 152 IGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWT 211
Query: 111 TMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
TM++GY + G + ARKLF+ VS W+ M+ GY + +++EA LF MP + V
Sbjct: 212 TMVSGYAKNGRVDVARKLFEVMPERNEVS-WTAMLMGYTQSGRMKEAFELFEAMPVKWIV 270
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ N M+ +G G++ +A +F M ER+ +WN +IK R G +A F +MQ
Sbjct: 271 ACNEMILQFGLAGEMHRARMMFEGM--KERDEGTWNAMIKVFERKGLDLEALGLFARMQ- 327
Query: 231 RERDVSSWTTIVDCL 245
RE ++ +++ L
Sbjct: 328 REGVALNFPSMISVL 342
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 3/184 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ I C+ GR D AR++FD+M R++ W TM++GY K G + ARKLF+ M ER+
Sbjct: 180 TNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEV 239
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT ML GY + G +KEA +LF+ K + + M+ + ++ A +F M ER
Sbjct: 240 SWTAMLMGYTQSGRMKEAFELFEAMPV-KWIVACNEMILQFGLAGEMHRARMMFEGMKER 298
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+ +WN M+ + + G +AL LF RM + E +++ ++I L C + H Q
Sbjct: 299 DEGTWNAMIKVFERKGLDLEALGLFARM-QREGVALNFPSMISVLSVCASLASLD-HGRQ 356
Query: 228 MQER 231
+ R
Sbjct: 357 VHAR 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN I + G AR +F+ M ERD W+ MI + + G+ EA LF +M
Sbjct: 272 CNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGV 331
Query: 107 RL-WTTMLNGYIECGMI------KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
L + +M++ C + ++ + ++ + S ++ YVK + A+
Sbjct: 332 ALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKG 391
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
+F + V WN M+ GY Q+G E+AL++F M + + V++ ++ A G+
Sbjct: 392 IFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGK 451
Query: 218 IEDAQWHFNQMQ---ERERDVSSWTTIVDCL 245
+++ F M+ + E + + +VD L
Sbjct: 452 VKEGFEIFEAMKCTYQVEPGIEHYACMVDLL 482
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 21/194 (10%)
Query: 31 RTRLASTF-SLNTEMKRCNSFISRLCKEGRTDHARKV---FDQMPERDMRLWDTMINGYI 86
R +A F S+ + + C S S GR HAR V FDQ D+ + +I Y+
Sbjct: 328 REGVALNFPSMISVLSVCASLAS--LDHGRQVHARLVRSEFDQ----DLYVASVLITMYV 381
Query: 87 KCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVS 139
KCG + A+ +F++ +D +W +M+ GY + G+ +EA +F PD +
Sbjct: 382 KCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIG 441
Query: 140 TWSTM-VNGYVKIN-QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
S +G VK +I EA + Y++ E + M+ G+ G++++A++L +MP
Sbjct: 442 VLSACSYSGKVKEGFEIFEAMKCTYQV-EPGIEHYACMVDLLGRAGRVDEAMELVEKMP- 499
Query: 198 PERNVVSWNTIIKA 211
E + + W ++ A
Sbjct: 500 MEPDAIVWGALLGA 513
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS ++ K GR AR++FD+M +R++ W+TMI GY+ M++EA KLFD MAERD
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W M+ Y GM+++AR+LF+ + + W+ M+ GY K + ++AE++F +MP +
Sbjct: 112 SWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVK 171
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
VS+N M+ GY QNG++ A+ F RM ERNVVSWN ++ V + A F +
Sbjct: 172 DLVSYNSMLAGYTQNGKMGLAMKFFERM--AERNVVSWNLMVAGFVNNCDLGSAWELFEK 229
Query: 228 MQERERDVSSWTTIV 242
+ + + SW T++
Sbjct: 230 IP--DPNAVSWVTML 242
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 123/197 (62%), Gaps = 8/197 (4%)
Query: 49 SFISRLC---KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
S+++ LC + G+ ARK+FD+MP +++ W+ MI Y++ I EA KLF + +D
Sbjct: 237 SWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKD 296
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
WTTM+NGY+ G + EAR++++ K V+ + +++G ++ +I+EA ++F ++
Sbjct: 297 CVSWTTMINGYVRVGKLDEAREVYN-QMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLN 355
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHF 225
+R + WN M+ GY Q+G++ +AL+LFR+M P +N VSWNT+I + G ++ A F
Sbjct: 356 KRDAICWNSMIAGYCQSGRMSEALNLFRQM--PVKNAVSWNTMISGYAQAGEMDRATEIF 413
Query: 226 NQMQERERDVSSWTTIV 242
M R+V SW +++
Sbjct: 414 EAMG--VRNVISWNSLI 428
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ ++ + D A K+F + P +D W TMINGY++ G + EAR++++QM +D
Sbjct: 270 NAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVA 329
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
T +++G I+ G I EA ++F + ++ W++M+ GY + ++ EA LF +MP +
Sbjct: 330 AKTALMSGLIQNGRIDEASQVFSQLNKRDAI-CWNSMIAGYCQSGRMSEALNLFRQMPVK 388
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
VSWN M+ GY Q G++++A ++F M RNV+SWN++I ++ G DA
Sbjct: 389 NAVSWNTMISGYAQAGEMDRATEIFEAM--GVRNVISWNSLITGFLQNGLYLDA 440
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I L K+G+ D A++VF + ++ +++M+ + K G + +AR+LFD+M++R+
Sbjct: 21 NKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLV 80
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W TM+ GY+ M++EA KLFD AE+ +W+ M+ Y + +E+A LF +P++
Sbjct: 81 SWNTMIAGYLHNNMVEEAHKLFD-LMAERDNFSWALMITCYTRKGMLEKARELFELVPDK 139
Query: 168 KDVS-WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
D + WN M+ GY + G+ + A +F +M P +++VS+N+++ + G++ A F
Sbjct: 140 LDTACWNAMIAGYAKKGRFDDAEKVFEKM--PVKDLVSYNSMLAGYTQNGKMGLAMKFFE 197
Query: 227 QMQERERDVSSWTTIV 242
+M ER+V SW +V
Sbjct: 198 RMA--ERNVVSWNLMV 211
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 124/226 (54%), Gaps = 36/226 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ K+GR D A KVF++MP +D+ +++M+ GY + G + A K F++MAER+
Sbjct: 146 NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVV 205
Query: 108 LWTTMLNGYIE--------------------------CGM-----IKEARKLFDGPDAEK 136
W M+ G++ CG I EARKLFD K
Sbjct: 206 SWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPC-K 264
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
+V +W+ M+ YV+ QI+EA +LF E P + VSW M+ GY + G++++A +++ +M
Sbjct: 265 NVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM- 323
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
P ++V + ++ L++ GRI++A F+Q+ +RD W +++
Sbjct: 324 -PYKDVAAKTALMSGLIQNGRIDEASQVFSQLN--KRDAICWNSMI 366
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 98/190 (51%), Gaps = 9/190 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I+ C+ GR A +F QMP ++ W+TMI+GY + G + A ++F+ M R+
Sbjct: 363 NSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVI 422
Query: 108 LWTTMLNGYIECGMIKEARK--LFDGPDAEK-SVSTWSTMVNGYVKINQIEEAERLFYEM 164
W +++ G+++ G+ +A K + G + +K ST++ ++ + ++ ++L +
Sbjct: 423 SWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELI 482
Query: 165 PERKDVS----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
+ ++ N ++ Y + G ++ A +F+ + + ++SWN++I G +
Sbjct: 483 LKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVD--LISWNSLISGYALNGYANE 540
Query: 221 AQWHFNQMQE 230
A W F QM
Sbjct: 541 AFWAFEQMSS 550
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 133/220 (60%), Gaps = 13/220 (5%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
++H +P + ++++ + S ++ K G + AR +FD MP R++ ++ M+
Sbjct: 59 ILHSFP--------SGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAML 110
Query: 83 NGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWS 142
+ Y++ GM ++A++ FD M ER+ WT ML+GY G I +ARK+FD E++V +W+
Sbjct: 111 SAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFD-EMPERNVVSWN 169
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
+MV G ++ +EEA ++F + P++ VSWN M+ GY +NG+++ A DLF ++ RNV
Sbjct: 170 SMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQI--ECRNV 227
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++W ++I R G + +A F M E++V SWT ++
Sbjct: 228 ITWTSMISGYCRVGDVNEAFRLFQIMP--EKNVVSWTAMI 265
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ +S + G T A++ FD MPER++ W M++GY G I +ARK+FD+M ER+
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVV 166
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
W +M+ G I G ++EARK+FD PD K+V +W+ M+ GYV+ ++++A+ LF ++
Sbjct: 167 SWNSMVVGLIRNGDLEEARKVFDDTPD--KNVVSWNAMIEGYVENGRMDDAKDLFDQIEC 224
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
R ++W M+ GY + G + +A LF+ M PE+NVVSW +I G +A F
Sbjct: 225 RNVITWTSMISGYCRVGDVNEAFRLFQIM--PEKNVVSWTAMIGGFAWNGFYREALLLFL 282
Query: 227 QM 228
M
Sbjct: 283 DM 284
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 18/233 (7%)
Query: 26 GYPFLRTRLASTFSLN------TEMKRCNSFISRLCKEGRTDHARKVFD-QMPERDMRLW 78
G+P L +L + LN + + S + G D AR VF+ M D + +
Sbjct: 308 GFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSF 367
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-PDAEKS 137
++MINGY++ G + +A++LFD + R+ WT M++GY+ G + +A LFD PD++K
Sbjct: 368 NSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKD 427
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDL-- 191
W+ M+ GYV+ I EA LF EM + + ++ ++ G G ++ L
Sbjct: 428 SIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHA 487
Query: 192 --FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + E E +V N++I +CG IEDA F+ M R++ SW +++
Sbjct: 488 MQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDK--ISWNSMI 538
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + L + G + ARKVFD P++++ W+ MI GY++ G + +A+ LFDQ+ R+
Sbjct: 169 NSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVI 228
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT+M++GY G + EA +LF EK+V +W+ M+ G+ EA LF +M
Sbjct: 229 TWTSMISGYCRVGDVNEAFRLFQ-IMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTL 287
Query: 168 KDVSWN 173
D N
Sbjct: 288 SDAKPN 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 49/235 (20%)
Query: 43 EMKRC-----NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
+MK C NS I+ + G+ A+++FD +P R+ W MI+GY+ G + +A L
Sbjct: 358 DMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNL 417
Query: 98 FDQM--AERDTRLWTTMLNGYIECGMIKEARKLFD-------GP---------------- 132
FD M +++D+ WT M+ GY++ +I EA LF P
Sbjct: 418 FDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVA 477
Query: 133 -----------------DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+ E V +++++ Y K +IE+A R+F M R +SWN M
Sbjct: 478 YLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSM 537
Query: 176 MGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+ G +G+ +AL+++ M E + V++ ++ A G ++ F+ M
Sbjct: 538 IMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVM 592
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 120/226 (53%), Gaps = 36/226 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA------------- 94
NS +S + G D AR+VFD MPE++ W+ ++ Y+ G I+EA
Sbjct: 146 NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI 205
Query: 95 ------------------RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK 136
R LFD+M RD W TM++GY + G + +AR+LFD +
Sbjct: 206 SWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD-ESPTR 264
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
V TW+ MV+GYV+ ++EA+ F EMPE+ +VS+N M+ GY Q +++ A +LF MP
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMP 324
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
RN+ SWNT+I + G I A+ F+ M +RD SW I+
Sbjct: 325 C--RNISSWNTMITGYGQIGDIAQARKFFDMMP--QRDCVSWAAII 366
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 114/195 (58%), Gaps = 5/195 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N IS + G D A VF+ MP R ++ MI+GY++ AR LFDQM ERD
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF 112
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W ML GY+ + +AR+LFD EK V +W+++++GY + ++EA +F MPE+
Sbjct: 113 SWNVMLTGYVRNCRLGDARRLFD-LMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK 171
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+SWN ++ Y NG+IE+A LF + + +++SWN ++ VR ++ DA+W F++
Sbjct: 172 NSISWNGLLAAYVHNGRIEEACLLFE--SKSDWDLISWNCLMGGFVRKKKLGDARWLFDK 229
Query: 228 MQERERDVSSWTTIV 242
M RD SW T++
Sbjct: 230 MP--VRDAISWNTMI 242
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + ++ + AR +FD+MP RD W+TMI+GY + G + +AR+LFD+ RD
Sbjct: 208 NCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVF 267
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT M++GY++ GM+ EA+ FD EK+ +++ M+ GYV+ +++ A LF MP R
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFD-EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCR 326
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
SWN M+ GYGQ G I +A F M P+R+ VSW II + G E+A F +
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFFDMM--PQRDCVSWAAIIAGYAQSGHYEEALNMFVE 384
Query: 228 MQE 230
+++
Sbjct: 385 IKQ 387
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 117/195 (60%), Gaps = 5/195 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ IS + + + AR +FDQMPERD+ W+ M+ GY++ + +AR+LFD M E+D
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W ++L+GY + G + EAR++FD + S+S W+ ++ YV +IEEA LF +
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEKNSIS-WNGLLAAYVHNGRIEEACLLFESKSDW 202
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+SWN +MGG+ + ++ A LF +M P R+ +SWNT+I + G + A+ F+
Sbjct: 203 DLISWNCLMGGFVRKKKLGDARWLFDKM--PVRDAISWNTMISGYAQGGGLSQARRLFD- 259
Query: 228 MQERERDVSSWTTIV 242
+ RDV +WT +V
Sbjct: 260 -ESPTRDVFTWTAMV 273
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 69 QMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKL 128
++ + D+ W+ I+ +++ G A +F+ M R + + M++GY+ AR L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
FD E+ + +W+ M+ GYV+ ++ +A RLF MPE+ VSWN ++ GY QNG +++A
Sbjct: 103 FD-QMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEA 161
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++F M PE+N +SWN ++ A V GRIE+A F + + D+ SW ++
Sbjct: 162 REVFDNM--PEKNSISWNGLLAAYVHNGRIEEACLLFE--SKSDWDLISWNCLM 211
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+ ++ Y KCG I EA F+ + E+D W TML GY G ++A +F+
Sbjct: 433 NALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVK 492
Query: 139 STWSTMVNGYVKINQ---IEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALD 190
TMV + ++ FY M + V + M+ G+ G++E+A D
Sbjct: 493 PDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQD 552
Query: 191 LFRRMP-EPERNVVSWNTIIKA 211
L R MP +P SW ++ A
Sbjct: 553 LIRNMPFQP--GAASWGALLGA 572
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ ++ K G D A F+ + E+D+ W+TM+ GY + G ++A +F+ M +
Sbjct: 433 NALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVK 492
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAER 159
D +L+ G++ + F + V ++ M++ + ++EEA+
Sbjct: 493 PDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQD 552
Query: 160 LFYEMP-ERKDVSWNIMMGG---YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
L MP + SW ++G +G EKA ++ +M EP+ N + +
Sbjct: 553 LIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKM-EPQ-NSGMYVLLSNLYAAS 610
Query: 216 GRIEDAQWHFNQMQERERDVS 236
GR DA ++M+ + RD+
Sbjct: 611 GRWVDA----DKMRSKMRDIG 627
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N ++ + GR + AR++F+ + ++ W+ ++ GY+K M+ +AR+LFD M R+
Sbjct: 145 NGLLAVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAI 204
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W TM++GY G + +AR+LF+ + V TW+ MV YV+ ++EA R+F EMP +
Sbjct: 205 SWNTMISGYARDGDLLQARRLFE-ESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGK 263
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+++++N+M+ GY Q +++ A +LF MP RNV SWNTII + G I A+ F+
Sbjct: 264 REMAYNVMIAGYVQYKKMDMARELFEAMPC--RNVGSWNTIISGYGQNGDIAQARELFDM 321
Query: 228 MQERERDVSSWTTIV 242
M +RD SW I+
Sbjct: 322 MT--QRDCVSWAAII 334
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 115/202 (56%), Gaps = 5/202 (2%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
+T + +C + IS + G A +VFD MP +++ W+ M+ GY+K + +AR LFD
Sbjct: 45 DTYIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDL 104
Query: 101 MAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
M ++D W ML+GY+ G + EA+ +FD + S+S W+ ++ YV+ ++EEA RL
Sbjct: 105 MPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSIS-WNGLLAVYVQNGRLEEARRL 163
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F + + +SWN +MGGY + + A LF M P RN +SWNT+I R G +
Sbjct: 164 FESKVDWELISWNCLMGGYVKRKMLGDARRLFDHM--PVRNAISWNTMISGYARDGDLLQ 221
Query: 221 AQWHFNQMQERERDVSSWTTIV 242
A+ F + RDV +WT +V
Sbjct: 222 ARRLFE--ESPVRDVFTWTAMV 241
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 3/192 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + K AR++FD MP R+ W+TMI+GY + G + +AR+LF++ RD
Sbjct: 176 NCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVF 235
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
WT M+ Y++ GM+ EAR++FD ++ ++ ++ M+ GYV+ +++ A LF MP R
Sbjct: 236 TWTAMVFAYVQSGMLDEARRVFDEMPGKREMA-YNVMIAGYVQYKKMDMARELFEAMPCR 294
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
SWN ++ GYGQNG I +A +LF M +R+ VSW II + G E +
Sbjct: 295 NVGSWNTIISGYGQNGDIAQARELFDMM--TQRDCVSWAAIIAGYAQTGHYEKVMHMLVK 352
Query: 228 MQERERDVSSWT 239
M+ + ++ T
Sbjct: 353 MKRDGKSLNRST 364
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 113/232 (48%), Gaps = 40/232 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ IS ++G AR++F++ P RD+ W M+ Y++ GM+ EAR++FD+M +
Sbjct: 207 NTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREM 266
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
+ M+ GY++ + AR+LF+ ++V +W+T+++GY + I +A LF M +R
Sbjct: 267 AYNVMIAGYVQYKKMDMARELFEAMPC-RNVGSWNTIISGYGQNGDIAQARELFDMMTQR 325
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV------------------------- 202
VSW ++ GY Q G EK + + +M +++
Sbjct: 326 DCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVH 385
Query: 203 ------------VSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ N +++ +CG I +A F +MQ +D+ SW T++
Sbjct: 386 GQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQ--LKDIISWNTML 435
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 42/213 (19%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
+ G D AR+VFD+MP + ++ MI GY++ + AR+LF+ M R+ W T+++G
Sbjct: 246 QSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISG 305
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP---------- 165
Y + G I +AR+LFD VS W+ ++ GY + E+ + +M
Sbjct: 306 YGQNGDIAQARELFDMMTQRDCVS-WAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRST 364
Query: 166 -----------------------------ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
+ + N ++ Y + G I +A D+F RM
Sbjct: 365 FCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQ 424
Query: 197 EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
++++SWNT++ R G A F+ M+
Sbjct: 425 L--KDIISWNTMLAGYARHGFGRQALLVFDSMK 455
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+ ++ Y KCG I EA +F++M +D W TML GY G ++A +FD
Sbjct: 401 NALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFK 460
Query: 139 STWSTMVNGYVKINQIEEAER---LFYEMPERKDVS-----WNIMMGGYGQNGQIEKALD 190
TMV + + +R FY M + ++ +N M+ G+ G +E+A +
Sbjct: 461 PDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHN 520
Query: 191 LFRRMP-EPERNVVSWNTIIKA 211
L R MP EP+ +W ++ A
Sbjct: 521 LMRNMPFEPD--AATWGALLGA 540
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + CK G A VF++M +D+ W+TM+ GY + G ++A +FD M +
Sbjct: 401 NALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFK 460
Query: 108 L-WTTMLNGYIEC---GMIKEARKLFDGPDAEKSVST----WSTMVNGYVKINQIEEAER 159
TM+ + C G+ + F + ++ ++ M++ + +EEA
Sbjct: 461 PDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHN 520
Query: 160 LFYEMPERKDVS-WNIMMGGYGQNGQIE 186
L MP D + W ++G +G E
Sbjct: 521 LMRNMPFEPDAATWGALLGASRIHGNAE 548
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 41/235 (17%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S I K+G + A KVF +M ER++ +W +INGYI CG + R+LFD ERD +
Sbjct: 150 SLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVM 209
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
W+ +++GYIE + AR+LFD ++S W+ M+NGY ++E E++F EMPER
Sbjct: 210 WSVLISGYIESKNMAAARELFDKMPNRDTMS-WNAMLNGYAVNGEVEMFEKVFDEMPERN 268
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRM-------PEP----------------------- 198
SWN ++GGY +NG + L+ F+RM P
Sbjct: 269 VFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVH 328
Query: 199 --------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
+ N+ N +I +CG IE+A FN + +D+ SW TI++ L
Sbjct: 329 VYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLD--RKDIISWNTIINGL 381
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 113/233 (48%), Gaps = 44/233 (18%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA------ 102
+FI+ + R HARK+FD++P+ + W+ M GY++ G ++ LF ++
Sbjct: 49 NFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMP 108
Query: 103 ---------------------------------ERDTRLWTTMLNGYIECGMIKEARKLF 129
+ ++ + T++++ Y + G +++A K+F
Sbjct: 109 NCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVF 168
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
G E++V W+ ++NGY+ + RLF PER V W++++ GY ++ + A
Sbjct: 169 -GEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAAR 227
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+LF +MP R+ +SWN ++ G +E + F++M ER+V SW ++
Sbjct: 228 ELFDKMPN--RDTMSWNAMLNGYAVNGEVEMFEKVFDEMP--ERNVFSWNGLI 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--- 130
++ + + +I+ Y KCG+I+ A +F+ + +D W T++NG G +A +FD
Sbjct: 339 NLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMK 398
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQI 185
E T+ +++ + +++ F M + + + M+ G+ G +
Sbjct: 399 SEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLL 458
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
++AL+ R+MP E + V W ++ A +E A+ ++ E E
Sbjct: 459 DQALNFIRKMP-IEPDAVIWAALLGACRLYKNVEIAELALQRLIELE 504
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 5/186 (2%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS +S K G D ++ FD++P +D+ W+ M++GY K G + A LF QM ER+
Sbjct: 174 NSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFA 233
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W TM+ GY++CG I EAR+LFD SVS TM+ GY K + A LF +M ++
Sbjct: 234 SWNTMITGYVDCGSIVEARELFDAMPRRNSVSLI-TMIAGYSKSGDVHSARELFDQMDDK 292
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV----VSWNTIIKALVRCGRIEDAQW 223
+S+N M+ Y Q+ + ++ALDLF M +P+ ++ ++ ++I A + G +E +W
Sbjct: 293 DLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRW 352
Query: 224 HFNQMQ 229
+Q+
Sbjct: 353 IESQIN 358
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 114/206 (55%), Gaps = 10/206 (4%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
LIHG+ F + + + + CK G ARKVFD+MP++++ W++++
Sbjct: 125 LIHGH-------VHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLL 177
Query: 83 NGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWS 142
+GYIK G + E ++ FD++ +D W M++GY + G + A LF E++ ++W+
Sbjct: 178 SGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQ-QMPERNFASWN 236
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
TM+ GYV I EA LF MP R VS M+ GY ++G + A +LF +M ++++
Sbjct: 237 TMITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQM--DDKDL 294
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQM 228
+S+N +I + + ++A FN M
Sbjct: 295 LSYNAMIACYAQSSKPKEALDLFNVM 320
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 10/210 (4%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKV-FDQMPERDMRLWDTMINGYIKCGMIKEA 94
S+ ++++ +K C LC H K FD L D Y K G + A
Sbjct: 103 SSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDL----YCKIGDVVTA 158
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI 154
RK+FD+M +++ W ++L+GYI+ G + E ++ FD K V +W+ MV+GY K ++
Sbjct: 159 RKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFD-EIPLKDVISWNCMVSGYAKAGKM 217
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
+ A LF +MPER SWN M+ GY G I +A +LF M P RN VS T+I +
Sbjct: 218 DRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAM--PRRNSVSLITMIAGYSK 275
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDC 244
G + A+ F+QM ++D+ S+ ++ C
Sbjct: 276 SGDVHSARELFDQMD--DKDLLSYNAMIAC 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 112/273 (41%), Gaps = 75/273 (27%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD-------- 99
N +S K G+ D A +F QMPER+ W+TMI GY+ CG I EAR+LFD
Sbjct: 205 NCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSV 264
Query: 100 -----------------------QMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPD 133
QM ++D + M+ Y + KEA LF+ PD
Sbjct: 265 SLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPD 324
Query: 134 A----------------------------EKSVSTW---------STMVNGYVKINQIEE 156
+ E ++ + + +++ Y K I++
Sbjct: 325 SSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDK 384
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
A LF+ + +R V+++ M+ G G NG+ A++LF RM N+V++ I+ A
Sbjct: 385 AYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNH 444
Query: 215 CGRIEDAQWHFNQMQERE--RDVSSWTTIVDCL 245
G E+ F M++ V + +VD L
Sbjct: 445 AGLAEEGYRCFISMKDNGIVPSVDHYGIMVDLL 477
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S + K G ARKVFD+M R + W +I GY +CG + EARKLFD M +RD
Sbjct: 163 SLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAA 222
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
+ M++GY++ G + AR LFD K+V +W++MV+GY + ++EA LF MPE+
Sbjct: 223 FNVMIDGYVKMGRMDLARDLFDKMRV-KNVISWTSMVHGYSEDGDVDEARFLFDCMPEKN 281
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRM---PEPERNVVSWNTIIKALVRCGRIEDAQWHF 225
+SWN M+ GY QNG+ AL LF M + E N V+ +++ A+ ++ W
Sbjct: 282 VLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVH 341
Query: 226 NQMQERERDVS 236
+Q + D S
Sbjct: 342 GFVQRNQLDGS 352
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ + ++++ Y+K G + ARK+FD+M+ R WT ++ GY CG + EARKLFDG
Sbjct: 157 DLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGM- 215
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
++ V+ ++ M++GYVK+ +++ A LF +M + +SW M+ GY ++G +++A LF
Sbjct: 216 VDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFD 275
Query: 194 RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
M PE+NV+SWN +I+ + GR DA F +M+
Sbjct: 276 CM--PEKNVLSWNAMIRGYCQNGRSHDALKLFCEMR 309
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 41/223 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I K GR D AR +FD+M +++ W +M++GY + G + EAR LFD M E++
Sbjct: 224 NVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVL 283
Query: 108 LWTTMLNGYIECGMIKEARKLF----DGPDAE---------------------------- 135
W M+ GY + G +A KLF D E
Sbjct: 284 SWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGF 343
Query: 136 -------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
SV + +V+ Y K +I +A+ +F EM E+ SWN ++ GYG NG ++A
Sbjct: 344 VQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEA 403
Query: 189 LDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
L++F M E N ++ +++ A CG +E+ + F M+
Sbjct: 404 LEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAME 446
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ + CN+ + K G A+ VF++M E+D W+ +INGY G KEA ++F
Sbjct: 349 LDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFA 408
Query: 100 QMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKIN 152
M E + T++L+ CG+++E R+ F+ + + + M++ +
Sbjct: 409 MMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMERFGIVPQIEHYGCMIDLLGRAG 468
Query: 153 QIEEAERLFYEMP 165
+++EAE+L MP
Sbjct: 469 RLDEAEKLIQAMP 481
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 44 MKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+ CN IS + G + A +F++M ++++ W M+ Y + G I ARKLFD+M E
Sbjct: 30 ITECNVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPE 89
Query: 104 RDTRLWTTMLNGYIECGM-IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
R T + M++GYI G + +A +LF VS ++ M+ G VK + + AE+L+
Sbjct: 90 RTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVS-YAAMIMGLVKARKFDLAEKLYR 148
Query: 163 EMPE--RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
E P R V N ++ GY + G++ +AL +F + +R+VVSW+ ++ L R GRI++
Sbjct: 149 EAPHEFRDPVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDN 208
Query: 221 AQWHFNQMQERERDVSSWTTIVD 243
A+ F++M ER+V SW+ ++D
Sbjct: 209 ARMLFDRMP--ERNVVSWSAMID 229
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----A 102
++ + LC++GR D+AR +FD+MPER++ W MI+GY++ G+ + LF M
Sbjct: 194 SAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVV 253
Query: 103 ERDTRLWTTMLNGYIECGMIKEA---RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
E ++ T M+ G CG +KE L E +T++ Y + A++
Sbjct: 254 EVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKK 313
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+F M + V+WN ++ GY N +++ A ++F RM PE++++SW +I+ GRI
Sbjct: 314 VFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERM--PEKDLISWTAMIRGFATDGRIG 371
Query: 220 DAQWHFNQMQERERDVSSWTTIVD 243
A F+ ++E++ V WT ++
Sbjct: 372 KAVELFDTLKEKDDFV--WTVLIS 393
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 44/265 (16%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+ GY + ++ S N ++ NS IS D A +VF++MPE+D+ W MI
Sbjct: 304 LFGYTDMAKKVFSGMG-NKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIR 362
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---------DGP-- 132
G+ G I +A +LFD + E+D +WT +++G++ +EA F P
Sbjct: 363 GFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLT 422
Query: 133 ---------------------------DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ E +S +++++ Y K + +A ++F ++
Sbjct: 423 ISSVLSASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVV 482
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQW 223
E VS+N ++ G+ QNG E+AL +++RM E N V++ ++ A G IE+
Sbjct: 483 EPNVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWN 542
Query: 224 HFNQMQER---ERDVSSWTTIVDCL 245
FN M+ R E + + +VD L
Sbjct: 543 LFNTMKSRYGIEPEADHYACMVDLL 567
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGM-IKEARKLFDQMAERDTR 107
+ ++ + G+ ARK+FD+MPER ++ MI+GYI+ G + +A +LF +R+
Sbjct: 66 AMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEV 125
Query: 108 LWTTML---------------------------------NGYIECGMIKEARKLFDGPDA 134
+ M+ NGY++ G + EA ++F+
Sbjct: 126 SYAAMIMGLVKARKFDLAEKLYREAPHEFRDPVCSNALINGYLKIGEMNEALRVFENVGV 185
Query: 135 EK-SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF- 192
K V +WS +V G + +I+ A LF MPER VSW+ M+ GY + G E LF
Sbjct: 186 SKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFL 245
Query: 193 --RRMPEPERNVVSWNTIIKALVRCGRIEDA 221
RR E N + +IK CGR+++
Sbjct: 246 DMRREGVVEVNSTTMTIMIKGCGNCGRVKEG 276
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 49/245 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG L +RL F N+ I+ G TD A+KVF M +D+ W+++I+
Sbjct: 279 IHG---LVSRLGFEFG----SVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLIS 331
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST 143
GYI + A ++F++M E+D WT M+ G+ G I +A +LFD EK W+
Sbjct: 332 GYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLK-EKDDFVWTV 390
Query: 144 MVNGYVKINQIEEAERLFYEMPERK----------------------------------- 168
+++G+V + EEA F M +
Sbjct: 391 LISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVLKMN 450
Query: 169 ---DVS-WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWH 224
D+S N ++ Y + G + A +F + EP NVVS+N++I + G E+A
Sbjct: 451 LEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEP--NVVSYNSVINGFAQNGFGEEALSM 508
Query: 225 FNQMQ 229
+ +MQ
Sbjct: 509 YKRMQ 513
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 130/234 (55%), Gaps = 13/234 (5%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNT---EMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
N ++ P +R+ + T + +T + + N IS L + GR AR +FD R+
Sbjct: 10 NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC---GMIKEARKLFDGP 132
W++MI GY++ I +AR+LFD+M RD W +++GY C ++E RKLFD
Sbjct: 70 VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
VS W+T+++GY K ++++A +F MPER VS N ++ G+ NG ++ A+ F
Sbjct: 130 PQRDCVS-WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQ----WHFNQMQERERDVSSWTTIV 242
R+M ER+ S + ++ LVR G+++ A + N+ E++ V ++ T++
Sbjct: 189 RKM--GERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLI 240
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 62/266 (23%)
Query: 31 RTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCG- 89
RT ST NT NS I+ + AR++FD+MP RD+ W+ +I+GY C
Sbjct: 58 RTLFDSTNHRNT--VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 90 --MIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
++E RKLFD M +RD W T+++GY + G + +A ++F+ E++V + + +VNG
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM-PERNVVSCNAVVNG 174
Query: 148 YVKINQIEEAERLFYEMPERKDVS------------------------------------ 171
++ ++ A F +M ER S
Sbjct: 175 FLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 172 -WNIMMGGYGQNGQIEKALDLF--------------RRMPEPERNVVSWNTIIKALVRCG 216
+N ++ GYGQ G +E+A +F RR+ +RNVVSWN+++ V+ G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRL---KRNVVSWNSMMMCYVKAG 291
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
+ A+ F++M ERD SW T++
Sbjct: 292 DVVSARELFDRMV--ERDACSWNTVI 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 57/247 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-------------PERDMRLWDTMINGYIKCGMIKEA 94
N+ I+ + G + AR VFD + +R++ W++M+ Y+K G + A
Sbjct: 237 NTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSA 296
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKI 151
R+LFD+M ERD W T++ GY++ G ++EA KLF PD V +W+++++G+ +I
Sbjct: 297 RELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPD----VLSWNSIISGFSQI 352
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSW-- 205
++ + F MP + +SWN ++ GY +N + A++LF +M P+R+ +S
Sbjct: 353 GDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSIL 412
Query: 206 ------------------------------NTIIKALVRCGRIEDAQWHFNQMQERERDV 235
N++I RCG I DA+ FN+M+ +DV
Sbjct: 413 SVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYKDV 471
Query: 236 SSWTTIV 242
+W ++
Sbjct: 472 ITWNAMI 478
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 43/241 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + G + A K+F +MP D+ W+++I+G+ + G +K ++ F+ M ++
Sbjct: 312 NTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLI 371
Query: 108 LWTTMLNGYIECGMIKEARKLF-------DGPDAEK-----SVSTW-------------- 141
W +++ GY + K A +LF + PD SVST
Sbjct: 372 SWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFV 431
Query: 142 -----------STMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKAL 189
++++ Y + +I +A +F EM KDV +WN M+GGY +G +AL
Sbjct: 432 TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQAL 491
Query: 190 DLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDC 244
+LF RM + + +++ +++ A G +E+ + FN M E V + ++VD
Sbjct: 492 ELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI 551
Query: 245 L 245
L
Sbjct: 552 L 552
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMA-ERDTRLWTTMLNGYIECGMIKEARKLFD-- 130
D+ + +++I Y +CG I +AR +F++M +D W M+ GY G +A +LF+
Sbjct: 438 DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM 497
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQ 184
G + + T+ +++N +EE +R F M + + ++ G+ GQ
Sbjct: 498 KGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQ 557
Query: 185 IEKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQ 222
+++A+DL MP +P++ V W ++ A ++ AQ
Sbjct: 558 LQEAMDLIVNMPVKPDKAV--WGALLGACRVHSNVDLAQ 594
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 130/234 (55%), Gaps = 13/234 (5%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNT---EMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
N ++ P +R+ + T + +T + + N IS L + GR AR +FD R+
Sbjct: 10 NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC---GMIKEARKLFDGP 132
W++MI GY++ I +AR+LFD+M RD W +++GY C ++E RKLFD
Sbjct: 70 VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
VS W+T+++GY K ++++A +F MPER VS N ++ G+ NG ++ A+ F
Sbjct: 130 PQRDCVS-WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQ----WHFNQMQERERDVSSWTTIV 242
R+M ER+ S + ++ LVR G+++ A + N+ E++ V ++ T++
Sbjct: 189 RKM--GERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLI 240
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 62/266 (23%)
Query: 31 RTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCG- 89
RT ST NT NS I+ + AR++FD+MP RD+ W+ +I+GY C
Sbjct: 58 RTLFDSTNHRNT--VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 90 --MIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
++E RKLFD M +RD W T+++GY + G + +A ++F+ E++V + + +VNG
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM-PERNVVSCNAVVNG 174
Query: 148 YVKINQIEEAERLFYEMPERKDVS------------------------------------ 171
++ ++ A F +M ER S
Sbjct: 175 FLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 172 -WNIMMGGYGQNGQIEKALDLF--------------RRMPEPERNVVSWNTIIKALVRCG 216
+N ++ GYGQ G +E+A +F RR+ +RNVVSWN+++ V+ G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRL---KRNVVSWNSMMMCYVKAG 291
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
+ A+ F++M ERD SW T++
Sbjct: 292 DVVSARELFDRMV--ERDACSWNTVI 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 57/247 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-------------PERDMRLWDTMINGYIKCGMIKEA 94
N+ I+ + G + AR VFD + +R++ W++M+ Y+K G + A
Sbjct: 237 NTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSA 296
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKI 151
R+LFD+M ERD W T++ GY++ G ++EA KLF PD V +W+++++G+ +I
Sbjct: 297 RELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPD----VLSWNSIISGFSQI 352
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSW-- 205
++ + F MP + +SWN ++ GY +N + A++LF +M P+R+ +S
Sbjct: 353 GDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSIL 412
Query: 206 ------------------------------NTIIKALVRCGRIEDAQWHFNQMQERERDV 235
N++I RCG I DA+ FN+M+ +DV
Sbjct: 413 SVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYKDV 471
Query: 236 SSWTTIV 242
+W ++
Sbjct: 472 ITWNAMI 478
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 43/241 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + G + A K+F +MP D+ W+++I+G+ + G +K ++ F+ M ++
Sbjct: 312 NTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLI 371
Query: 108 LWTTMLNGYIECGMIKEARKLF-------DGPDAEK-----SVSTW-------------- 141
W +++ GY + K A +LF + PD SVST
Sbjct: 372 SWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFV 431
Query: 142 -----------STMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKAL 189
++++ Y + +I +A +F EM KDV +WN M+GGY +G +AL
Sbjct: 432 TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQAL 491
Query: 190 DLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDC 244
+LF RM + + +++ +++ A G +E+ + FN M E V + ++VD
Sbjct: 492 ELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI 551
Query: 245 L 245
L
Sbjct: 552 L 552
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMA-ERDTRLWTTMLNGYIECGMIKEARKLFD-- 130
D+ + +++I Y +CG I +AR +F++M +D W M+ GY G +A +LF+
Sbjct: 438 DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM 497
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQ 184
G + + T+ +++N +EE +R F M + + ++ G+ GQ
Sbjct: 498 KGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQ 557
Query: 185 IEKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQ 222
+++A+DL MP +P++ V W ++ A ++ AQ
Sbjct: 558 LQEAMDLIVNMPVKPDKAV--WGALLGACRVHSNVDLAQ 594
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 130/234 (55%), Gaps = 13/234 (5%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNT---EMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
N ++ P +R+ + T + +T + + N IS L + GR AR +FD R+
Sbjct: 10 NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC---GMIKEARKLFDGP 132
W++MI GY++ I +AR+LFD+M RD W +++GY C ++E RKLFD
Sbjct: 70 VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
VS W+T+++GY K ++++A +F MPER VS N ++ G+ NG ++ A+ F
Sbjct: 130 PQRDCVS-WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQ----WHFNQMQERERDVSSWTTIV 242
R+M ER+ S + ++ LVR G+++ A + N+ E++ V ++ T++
Sbjct: 189 RKM--GERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLI 240
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 62/266 (23%)
Query: 31 RTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCG- 89
RT ST NT NS I+ + AR++FD+MP RD+ W+ +I+GY C
Sbjct: 58 RTLFDSTNHRNT--VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 90 --MIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
++E RKLFD M +RD W T+++GY + G + +A ++F+ E++V + + +VNG
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM-PERNVVSCNAVVNG 174
Query: 148 YVKINQIEEAERLFYEMPERKDVS------------------------------------ 171
++ ++ A F +M ER S
Sbjct: 175 FLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 172 -WNIMMGGYGQNGQIEKALDLF--------------RRMPEPERNVVSWNTIIKALVRCG 216
+N ++ GYGQ G +E+A +F RR+ +RNVVSWN+++ V+ G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRL---KRNVVSWNSMMMCYVKAG 291
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
+ A+ F++M ERD SW T++
Sbjct: 292 DVVSARELFDRMV--ERDACSWNTVI 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 57/247 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-------------PERDMRLWDTMINGYIKCGMIKEA 94
N+ I+ + G + AR VFD + +R++ W++M+ Y+K G + A
Sbjct: 237 NTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSA 296
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKI 151
R+LFD+M ERD W T++ GY++ G ++EA KLF PD V +W+++++G+ +I
Sbjct: 297 RELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPD----VLSWNSIISGFSQI 352
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSW-- 205
++ + F MP + +SWN ++ GY +N + A++LF +M P+R+ +S
Sbjct: 353 GDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSIL 412
Query: 206 ------------------------------NTIIKALVRCGRIEDAQWHFNQMQERERDV 235
N++I RCG I DA+ FN+M+ +DV
Sbjct: 413 SVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYKDV 471
Query: 236 SSWTTIV 242
+W ++
Sbjct: 472 ITWNAMI 478
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 43/241 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + G + A K+F +MP D+ W+++I+G+ + G +K ++ F+ M ++
Sbjct: 312 NTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLI 371
Query: 108 LWTTMLNGYIECGMIKEARKLF-------DGPDAEK-----SVSTW-------------- 141
W +++ GY + K A +LF + PD SVST
Sbjct: 372 SWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFV 431
Query: 142 -----------STMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKAL 189
++++ Y + +I +A +F EM KDV +WN M+GGY +G +AL
Sbjct: 432 TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQAL 491
Query: 190 DLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDC 244
+LF RM + + +++ +++ A G +E+ + FN M E V + ++VD
Sbjct: 492 ELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI 551
Query: 245 L 245
L
Sbjct: 552 L 552
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMA-ERDTRLWTTMLNGYIECGMIKEARKLFD-- 130
D+ + +++I Y +CG I +AR +F++M +D W M+ GY G +A +LF+
Sbjct: 438 DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM 497
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQ 184
G + + T+ +++N +EE +R F M + + ++ G+ GQ
Sbjct: 498 KGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQ 557
Query: 185 IEKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQ 222
+++A+DL MP +P++ V W ++ A ++ AQ
Sbjct: 558 LQEAMDLIVNMPVKPDKAV--WGALLGACRVHSNVDLAQ 594
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 130/234 (55%), Gaps = 13/234 (5%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNT---EMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
N ++ P +R+ + T + +T + + N IS L + GR AR +FD R+
Sbjct: 10 NITKILQLAPHIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNT 69
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC---GMIKEARKLFDGP 132
W++MI GY++ I +AR+LFD+M RD W +++GY C ++E RKLFD
Sbjct: 70 VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIM 129
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
VS W+T+++GY K ++++A +F MPER VS N ++ G+ NG ++ A+ F
Sbjct: 130 PQRDCVS-WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQ----WHFNQMQERERDVSSWTTIV 242
R+M ER+ S + ++ LVR G+++ A + N+ E++ V ++ T++
Sbjct: 189 RKM--GERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLI 240
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 62/266 (23%)
Query: 31 RTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCG- 89
RT ST NT NS I+ + AR++FD+MP RD+ W+ +I+GY C
Sbjct: 58 RTLFDSTNHRNT--VTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRG 115
Query: 90 --MIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
++E RKLFD M +RD W T+++GY + G + +A ++F+ E++V + + +VNG
Sbjct: 116 SRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESM-PERNVVSCNAVVNG 174
Query: 148 YVKINQIEEAERLFYEMPERKDVS------------------------------------ 171
++ ++ A F +M ER S
Sbjct: 175 FLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVY 234
Query: 172 -WNIMMGGYGQNGQIEKALDLF--------------RRMPEPERNVVSWNTIIKALVRCG 216
+N ++ GYGQ G +E+A +F RR+ +RNVVSWN+++ V+ G
Sbjct: 235 AYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRL---KRNVVSWNSMMMCYVKAG 291
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
+ A+ F++M ERD SW T++
Sbjct: 292 DVVSARELFDRMV--ERDACSWNTVI 315
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 57/247 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-------------PERDMRLWDTMINGYIKCGMIKEA 94
N+ I+ + G + AR VFD + +R++ W++M+ Y+K G + A
Sbjct: 237 NTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSA 296
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKI 151
R+LFD+M ERD W T++ GY++ G ++EA KLF PD V +W+++++G+ +I
Sbjct: 297 RELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPD----VLSWNSIISGFSQI 352
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSW-- 205
++ + F MP + +SWN ++ GY +N + A++LF +M P+R+ +S
Sbjct: 353 GDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSIL 412
Query: 206 ------------------------------NTIIKALVRCGRIEDAQWHFNQMQERERDV 235
N++I RCG I DA+ FN+M+ +DV
Sbjct: 413 SVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYKDV 471
Query: 236 SSWTTIV 242
+W ++
Sbjct: 472 ITWNAMI 478
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 43/241 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + G + A K+F +MP D+ W+++I+G+ + G +K ++ F+ M ++
Sbjct: 312 NTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLI 371
Query: 108 LWTTMLNGYIECGMIKEARKLF-------DGPDAEK-----SVSTW-------------- 141
W +++ GY + K A +LF + PD SVST
Sbjct: 372 SWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFV 431
Query: 142 -----------STMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKAL 189
++++ Y + +I +A +F EM KDV +WN M+GGY +G +AL
Sbjct: 432 TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQAL 491
Query: 190 DLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDC 244
+LF RM + + +++ +++ A G +E+ + FN M E V + ++VD
Sbjct: 492 ELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI 551
Query: 245 L 245
L
Sbjct: 552 L 552
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMA-ERDTRLWTTMLNGYIECGMIKEARKLFD-- 130
D+ + +++I Y +CG I +AR +F++M +D W M+ GY G +A +LF+
Sbjct: 438 DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM 497
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQ 184
G + + T+ +++N +EE +R F M + + ++ G+ GQ
Sbjct: 498 KGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQ 557
Query: 185 IEKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQ 222
+++A+DL MP +P++ V W ++ A ++ AQ
Sbjct: 558 LQEAMDLIVNMPVKPDKAV--WGALLGACRVHSNVDLAQ 594
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 8/213 (3%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNTEMKR--CNSFISRLCKEGRTDHARKVFDQMPERDMR 76
++HP + P++++ A + +++ + ++ K G ARKVFD MPER++
Sbjct: 62 DSHPFL---PYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVV 118
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-PDAE 135
W+ MI GY++ G K A F++M + W+ M+ G+ G ARK FD P
Sbjct: 119 TWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYEL 178
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
K V W+ MV+GY K ++E+A +F MPER W+ M+ GY + G + +A +FRR+
Sbjct: 179 KDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238
Query: 196 PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
P RN+ WN++I V+ G E A F +M
Sbjct: 239 --PVRNLEIWNSMIAGYVQNGCGEKALEAFGEM 269
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ + ++ Y KCG++ +ARK+FD M ER+ W M+ GY+ G K A F+
Sbjct: 85 DVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMP 144
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-ERKDVS-WNIMMGGYGQNGQIEKALDL 191
+ VS WS M+ G+ + A + F ++P E KDV W +M+ GY + G++E A ++
Sbjct: 145 GKTRVS-WSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREV 203
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
F MPE RN W++++ + G + +A+ F ++ R ++ W +++
Sbjct: 204 FELMPE--RNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEI--WNSMI 250
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 42/232 (18%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K+G + AR+VF+ MPER+ +W +M+ GY K G + EA +F ++ R+ +W +M+ G
Sbjct: 193 KKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAG 252
Query: 116 YIECGMIKEARKLF-----DG--PDAEKSVSTWST------------------------- 143
Y++ G ++A + F DG PD VS S
Sbjct: 253 YVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVN 312
Query: 144 ------MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+++ Y K + A +F ER WN M+ G+ NGQ + L+ RM E
Sbjct: 313 QFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQE 372
Query: 198 PE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ V++ T++ A G + +A ++M+E E + + +VD L
Sbjct: 373 SNIRLDAVTFITVLSACAHGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLL 424
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 125 ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
A + G D + + T +V Y K + +A ++F MPER V+WN M+GGY +NG
Sbjct: 75 AESIKAGSDVDVFIGT--AIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGD 132
Query: 185 IEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+ AL F MP R VSW+ +I R G A+ F+++ +DV WT +VD
Sbjct: 133 AKSALLAFEEMPGKTR--VSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVD 189
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 8/213 (3%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNTEMKR--CNSFISRLCKEGRTDHARKVFDQMPERDMR 76
++HP + P++++ A + +++ + ++ K G ARKVFD M ER+
Sbjct: 62 DSHPFL---PYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDV 118
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-PDAE 135
W+ MI GY++ G K A F++M + W+ M+ G+ G ARK FD P
Sbjct: 119 TWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYEL 178
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
K V W+ MV+GY K ++E+A +F MPER W+ M+ GY + G + +A +FRR+
Sbjct: 179 KDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238
Query: 196 PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
P RN+ WN++I V+ G E A F +M
Sbjct: 239 --PVRNLEIWNSMIAGYVQNGCGEKALEAFGEM 269
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ + ++ Y KCG++ +ARK+FD M ER+ W M+ GY+ G K A F+
Sbjct: 85 DVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMP 144
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-ERKDVS-WNIMMGGYGQNGQIEKALDL 191
+ VS WS M+ G+ + A + F ++P E KDV W +M+ GY + G++E A ++
Sbjct: 145 GKTRVS-WSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDGYAKKGEMEDAREV 203
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
F MPE RN W++++ + G + +A+ F ++ R ++ W +++
Sbjct: 204 FELMPE--RNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEI--WNSMI 250
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 42/232 (18%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K+G + AR+VF+ MPER+ +W +M+ GY K G + EA +F ++ R+ +W +M+ G
Sbjct: 193 KKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAG 252
Query: 116 YIECGMIKEARKLF-----DG--PDAEKSVSTWST------------------------- 143
Y++ G ++A + F DG PD VS S
Sbjct: 253 YVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVN 312
Query: 144 ------MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+++ Y K + A +F ER WN M+ G+ NGQ + L+ RM E
Sbjct: 313 QFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEE 372
Query: 198 PE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ V++ T++ A G + +A ++M+E E + + +VD L
Sbjct: 373 SNIRPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIEMGIRHYGCMVDLL 424
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 125 ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
A + G D + + T +V Y K + +A ++F M ER DV+WN M+GGY +NG
Sbjct: 75 AESIKAGSDVDVFIGT--AIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGD 132
Query: 185 IEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+ AL F MP R VSW+ +I R G A+ F+++ +DV WT +VD
Sbjct: 133 AKSALLAFEEMPGKTR--VSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMVD 189
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 116/232 (50%), Gaps = 39/232 (16%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I C+ G + A KVF M ERD+ W++M+ G +K G + A K+FD+M ERD
Sbjct: 163 NSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRV 222
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W TML+G+ + G + +A KLF+ AE+ + +WSTMV GY K ++ A LF P +
Sbjct: 223 SWNTMLDGFTKAGEMDKAFKLFERM-AERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVK 281
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPE-----------------PERNVVS------ 204
V W ++ GY + GQ+++A++L M + E ++
Sbjct: 282 NLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMH 341
Query: 205 --------------WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N+ I +CG ++DA FN M+ E+D+ SW +++
Sbjct: 342 DSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKT-EKDLVSWNSMI 392
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ + +++I+ Y +CG ++ A K+F M ERD W +M+ G ++ G + A K+FD
Sbjct: 158 DIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFD-EM 216
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
E+ +W+TM++G+ K ++++A +LF M ER VSW+ M+ GY +NG ++ A LF
Sbjct: 217 PERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFD 276
Query: 194 RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
R P +N+V W TII G++++A ++M++
Sbjct: 277 RC--PVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEK 311
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 76/256 (29%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + L K G D A KVFD+MPERD W+TM++G+ K G + +A KLF++MAERD
Sbjct: 194 NSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIV 253
Query: 108 -------------------------------LWTTMLNGYIECGMIKEARKLFD------ 130
LWTT+++GY E G +KEA L D
Sbjct: 254 SWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSG 313
Query: 131 ------------GPDAEK--------------------SVSTWSTMVNGYVKINQIEEAE 158
AE S ++ ++ Y K +++A
Sbjct: 314 LRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAF 373
Query: 159 RLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALV 213
R+F M KD VSWN M+ G+G +G EK+++LF M +P+R ++ ++ A
Sbjct: 374 RVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDR--YTFIGLLCACT 431
Query: 214 RCGRIEDAQWHFNQMQ 229
G + + + +F MQ
Sbjct: 432 HAGLVNEGRGYFYSMQ 447
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 115/196 (58%), Gaps = 10/196 (5%)
Query: 37 TFSLNTEMKRCNSFISRLCKE--GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
+++ + +K C S CK G++ H VF ++D+ + T+++ Y KCG I +A
Sbjct: 115 SYTYPSVIKAC----SGTCKVLVGKSVHG-SVFRCGLDQDLFVGTTLVDMYGKCGEIGDA 169
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI 154
RK+FD++++R+ WT M+ GY+ G + EA+K+FD ++V++W+ M+ G+VK+ +
Sbjct: 170 RKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPL-RNVASWNAMIRGFVKVGDL 228
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
A +F MPE+ VS+ M+ GY + G +E + LF + E++VV+W+ +I V+
Sbjct: 229 SSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESSRFLFEQ--AAEKDVVAWSALISGYVQ 286
Query: 215 CGRIEDAQWHFNQMQE 230
G +A F +M+
Sbjct: 287 NGEANEALKVFLEMES 302
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 88/140 (62%), Gaps = 5/140 (3%)
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
++D + TT+++ Y +CG I +ARK+FD ++++V +W+ MV GYV + EA+++F
Sbjct: 147 DQDLFVGTTLVDMYGKCGEIGDARKVFD-ELSDRNVVSWTAMVVGYVTAGDVVEAKKVFD 205
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
EMP R SWN M+ G+ + G + A +F MPE +NVVS+ T+I + G +E ++
Sbjct: 206 EMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPE--KNVVSFTTMIDGYAKAGDMESSR 263
Query: 223 WHFNQMQERERDVSSWTTIV 242
+ F Q E+DV +W+ ++
Sbjct: 264 FLFE--QAAEKDVVAWSALI 281
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 45/226 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I K G AR VFD MPE+++ + TMI+GY K G ++ +R LF+Q AE+D
Sbjct: 216 NAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESSRFLFEQAAEKDVV 275
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTM-----------VNGYV 149
W+ +++GY++ G EA K+F PD VS S V+ YV
Sbjct: 276 AWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDLKLAQRVDSYV 335
Query: 150 ---------------------KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
K +E A +LF EMP+R VS+ M+ G+ +G E A
Sbjct: 336 DNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPKRDLVSYCSMIHGFSIHGHGEDA 395
Query: 189 LDLFRRM----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
++LF RM P+ ++ ++ A G ++ +FN M+E
Sbjct: 396 VNLFNRMLMEGIVPDE--AAFTIVLTACSHSGLVDKGWKYFNSMEE 439
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 15/191 (7%)
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGY- 116
++ VF+++ LW+T I + + + F +M A D+ + +++
Sbjct: 67 YSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACS 126
Query: 117 ----IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
+ G G D + V T T+V+ Y K +I +A ++F E+ +R VSW
Sbjct: 127 GTCKVLVGKSVHGSVFRCGLDQDLFVGT--TLVDMYGKCGEIGDARKVFDELSDRNVVSW 184
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
M+ GY G + +A +F MP RNV SWN +I+ V+ G + A+ F+ M E
Sbjct: 185 TAMVVGYVTAGDVVEAKKVFDEMPL--RNVASWNAMIRGFVKVGDLSSARGVFDSMP--E 240
Query: 233 RDVSSWTTIVD 243
++V S+TT++D
Sbjct: 241 KNVVSFTTMID 251
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 6/162 (3%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
AR FD MP RD W+TM++GY + M+ EAR+L M E++ W+ M++GY+ CG +
Sbjct: 122 ARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAMPEKNCVTWSAMVSGYVACGDL 181
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQN 182
A + F KSV TW+ M+ GY+K ++ AE LF+++ + V+WN M+ GY N
Sbjct: 182 DAAVECFYAAPM-KSVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDN 240
Query: 183 GQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQ 222
G+ E L LF+ M E + N +S ++ L+ C + Q
Sbjct: 241 GRAENGLKLFKTMLETGVKPNALSLTSV---LLGCSDLSALQ 279
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G + AR++FD++PE + ++TM+ Y+ I AR FD M RDT W TML+G
Sbjct: 84 KHGNFERARQLFDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRDTASWNTMLSG 143
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
Y + M+ EAR+L EK+ TWS MV+GYV ++ A FY P + ++W M
Sbjct: 144 YAQVRMMDEARRLLVAM-PEKNCVTWSAMVSGYVACGDLDAAVECFYAAPMKSVITWTAM 202
Query: 176 MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ GY + G++ A LF ++ + +V+WN +I V GR E+ F M E
Sbjct: 203 ITGYMKFGRVGLAEMLFWKL--SLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLE 255
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC 88
FLR +TFS+++ + + +T HA +D ++ + +I Y++
Sbjct: 6 FLRRNKLNTFSISS--------FATVTNHTKTHHA---YDH-DHSNVIASNQLIASYVRS 53
Query: 89 GMIKEARKLFDQMAERDTRLWTTMLNGYI-ECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
G I A ++F M T W T+L + + G + AR+LFD +VS ++TM+
Sbjct: 54 GDIDSALRVFHNMTVISTTTWNTILGAFAKKHGNFERARQLFDKIPEPNTVS-YNTMLAC 112
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNT 207
Y+ I A F MP R SWN M+ GY Q +++A L M PE+N V+W+
Sbjct: 113 YLHHFGIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAM--PEKNCVTWSA 170
Query: 208 IIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ V CG ++ A F + V +WT ++
Sbjct: 171 MVSGYVACGDLDAAVECF--YAAPMKSVITWTAMI 203
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 43/237 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ +S + D AR++ MPE++ W M++GY+ CG + A + F +
Sbjct: 138 NTMLSGYAQVRMMDEARRLLVAMPEKNCVTWSAMVSGYVACGDLDAAVECFYAAPMKSVI 197
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE- 166
WT M+ GY++ G + A LF + K++ TW+ M+ GYV + E +LF M E
Sbjct: 198 TWTAMITGYMKFGRVGLAEMLF-WKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLET 256
Query: 167 --------------------------------------RKDVSWNIMMGGYGQNGQIEKA 188
R + ++ Y + G ++ +
Sbjct: 257 GVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDS 316
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
DLF ++ P ++VV+WN +I + G E A F++M++ E W T V L
Sbjct: 317 WDLFVQI--PRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIK-PDWITFVAVL 370
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
++ +S G D A + F P + + W MI GY+K G + A LF +++ +
Sbjct: 169 SAMVSGYVACGDLDAAVECFYAAPMKSVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLV 228
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-------PDA-------------------------- 134
W M+ GY++ G + KLF P+A
Sbjct: 229 TWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLV 288
Query: 135 -----EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+ + +++++ Y K ++++ LF ++P + V+WN M+ GY Q+G EKAL
Sbjct: 289 CKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKAL 348
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRC---GRIEDAQWHFNQM 228
LF M + E W T + L+ C G ++ +FN M
Sbjct: 349 HLFDEMKKSEIK-PDWITFVAVLLACNHAGMVDLGTKYFNSM 389
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
RD ++I+ Y KCG +K++ LF Q+ +D W M++GY + G ++A LFD
Sbjct: 294 SRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDE 353
Query: 132 PDAEKSVSTWSTMVNGYVKINQ---IEEAERLFYEMPERKDVS-----WNIMMGGYGQNG 183
+ W T V + N ++ + F M + + + M+ G+ G
Sbjct: 354 MKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAG 413
Query: 184 QIEKALDLFRRMP 196
++ +A+D+ + MP
Sbjct: 414 RLSEAVDMVKSMP 426
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ + S IS K G + +F Q+P +D+ W+ MI+GY + G ++A LFD
Sbjct: 293 LSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFD 352
Query: 100 QMAERDTRL-WTTMLNGYIEC---GMIKEARKLFDGPDAEKSVST----WSTMVNGYVKI 151
+M + + + W T + + C GM+ K F+ E + T + MV+ +
Sbjct: 353 EMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRA 412
Query: 152 NQIEEAERLFYEMP 165
++ EA + MP
Sbjct: 413 GRLSEAVDMVKSMP 426
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 118/244 (48%), Gaps = 53/244 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ IS K GR D A ++F+ MPER++ + ++NG++ G + A F +M ERD+
Sbjct: 64 NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSA 123
Query: 108 -------------------------------------LWTTMLNGYIECGMIKEARKLFD 130
+ T++ GY + GM++EAR +FD
Sbjct: 124 SLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFD 183
Query: 131 GPDAE------------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
G ++ ++V +W++M+ YVK + A LF M ER SWN ++GG
Sbjct: 184 GVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGG 243
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSW 238
Y Q G +E+A LF MP P+ V+SWN+II + G ++ + F M +++ SW
Sbjct: 244 YVQIGDMEEASKLFLEMPIPD--VLSWNSIISGFSQIGDLKRVKEFFENMP--HKNLISW 299
Query: 239 TTIV 242
+++
Sbjct: 300 NSVI 303
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 57/247 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-------------PERDMRLWDTMINGYIKCGMIKEA 94
N+ I+ + G + AR VFD + +R++ W++M+ Y+K G + A
Sbjct: 163 NTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSA 222
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKI 151
R+LFD+M ERD W T++ GY++ G ++EA KLF PD V +W+++++G+ +I
Sbjct: 223 RELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPD----VLSWNSIISGFSQI 278
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSW-- 205
++ + F MP + +SWN ++ GY +N + A++LF +M P+R+ +S
Sbjct: 279 GDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSIL 338
Query: 206 ------------------------------NTIIKALVRCGRIEDAQWHFNQMQERERDV 235
N++I RCG I DA+ FN+M+ +DV
Sbjct: 339 SVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMK-LYKDV 397
Query: 236 SSWTTIV 242
+W ++
Sbjct: 398 ITWNAMI 404
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 60/234 (25%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKC---GMIKEARKLFDQMAERDTRLWTTMLNGYIEC 119
AR++FD+MP RD+ W+ +I+GY C ++E RKLFD M +RD W T+++GY +
Sbjct: 14 ARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKN 73
Query: 120 GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-------- 171
G + +A ++F+ E++V + + +VNG++ ++ A F +M ER S
Sbjct: 74 GRMDQAIEIFESM-PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGL 132
Query: 172 -----------------------------WNIMMGGYGQNGQIEKALDLF---------- 192
+N ++ GYGQ G +E+A +F
Sbjct: 133 VRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEG 192
Query: 193 ----RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
RR+ +RNVVSWN+++ V+ G + A+ F++M ERD SW T++
Sbjct: 193 NEGKRRL---KRNVVSWNSMMMCYVKAGDVVSARELFDRM--VERDACSWNTVI 241
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECG---MIKEARKLFDGPDAEKS 137
MI GY++ I +AR+LFD+M RD W +++GY C ++E RKLFD
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
VS W+T+++GY K ++++A +F MPER VS N ++ G+ NG ++ A+ FR+M
Sbjct: 61 VS-WNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKM-- 117
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQ----WHFNQMQERERDVSSWTTIV 242
ER+ S + ++ LVR G+++ A + N+ E++ V ++ T++
Sbjct: 118 GERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLI 166
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 43/241 (17%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + G + A K+F +MP D+ W+++I+G+ + G +K ++ F+ M ++
Sbjct: 238 NTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLI 297
Query: 108 LWTTMLNGYIECGMIKEARKLF-------DGPDAEK-----SVSTW-------------- 141
W +++ GY + K A +LF + PD SVST
Sbjct: 298 SWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFV 357
Query: 142 -----------STMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKAL 189
++++ Y + +I +A +F EM KDV +WN M+GGY +G +AL
Sbjct: 358 TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQAL 417
Query: 190 DLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDC 244
+LF RM + + +++ +++ A G +E+ + FN M E V + ++VD
Sbjct: 418 ELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDI 477
Query: 245 L 245
L
Sbjct: 478 L 478
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMA-ERDTRLWTTMLNGYIECGMIKEARKLFD-- 130
D+ + +++I Y +CG I +AR +F++M +D W M+ GY G +A +LF+
Sbjct: 364 DLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERM 423
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI-----MMGGYGQNGQ 184
G + + T+ +++N +EE +R F M + + ++ G+ GQ
Sbjct: 424 KGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQ 483
Query: 185 IEKALDLFRRMP-EPERNVVSWNTIIKA 211
+++A+DL MP +P++ V W ++ A
Sbjct: 484 LQEAMDLIVNMPVKPDKAV--WGALLGA 509
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 35/241 (14%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+H+H + T P YP TF LN + IS K G +A KVFDQMP
Sbjct: 31 LHSHIIKTLP----YP-------ETFLLN-------NLISSYAKLGSIPYASKVFDQMPH 72
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF--- 129
++ W+T+++ Y K G + E LFD M RD W ++++GY CG+I ++ K +
Sbjct: 73 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 132
Query: 130 ---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQ 181
DG + T+ST++ K ++ ++ + + +S+ + +G Y +
Sbjct: 133 LKNDGSINLNRI-TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY-VFVGSPLVDMYSK 190
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
G I A +F + PE+NVV +NT+I L+RCGR+ED++ F +M RERD SWT++
Sbjct: 191 MGMISCARKVFDEL--PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM--RERDSISWTSM 246
Query: 242 V 242
+
Sbjct: 247 I 247
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 77/262 (29%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G ARKVFD++PE+++ +++T+I G ++CG ++++++LF +M ERD+ WT+M+ G
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 116 YIECGMIKEARKLF-----------------------------DG---------PDAEKS 137
+ + G+ ++A +F +G D + +
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP- 196
+ S +V Y K I+ AE +F +M + VSW M+ GYGQNG E+A+ F M
Sbjct: 310 IFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 197 ---EPE-----------------------------RNVVSWNTIIKALV----RCGRIED 220
EP+ ++S+ T+ ALV +CG IED
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429
Query: 221 AQWHFNQMQERERDVSSWTTIV 242
+ FN++ +D +WT +V
Sbjct: 430 SHRLFNEIS--FKDEVTWTALV 449
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
++ + CK A VF +M +++ W M+ GY + G +EA K F M E
Sbjct: 314 SALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 104 RDTRLWTTMLNGYIECGMIKE-----ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D ++++ ++E AR L G + +VS + +V Y K IE++
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVS--NALVTLYGKCGSIEDSH 431
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALVR 214
RLF E+ + +V+W ++ GY Q G+ + + LF M +P++ V++ ++ A R
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDK--VTFIGVLSACSR 489
Query: 215 CGRIEDAQWHFNQM 228
G +E F M
Sbjct: 490 AGLVEKGNQIFESM 503
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 35/241 (14%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+H+H + T P YP TF LN + IS K G +A KVFDQMP
Sbjct: 31 LHSHIIKTLP----YP-------ETFLLN-------NLISSYAKLGSIPYASKVFDQMPH 72
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF--- 129
++ W+T+++ Y K G + E LFD M RD W ++++GY CG+I ++ K +
Sbjct: 73 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 132
Query: 130 ---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQ 181
DG + T+ST++ K ++ ++ + + +S+ + +G Y +
Sbjct: 133 LKNDGSINLNRI-TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY-VFVGSPLVDMYSK 190
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
G I A +F + PE+NVV +NT+I L+RCGR+ED++ F +M RERD SWT++
Sbjct: 191 MGMISCARKVFDEL--PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM--RERDSISWTSM 246
Query: 242 V 242
+
Sbjct: 247 I 247
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 77/262 (29%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G ARKVFD++PE+++ +++T+I G ++CG ++++++LF +M ERD+ WT+M+ G
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 116 YIECGMIKEARKLF-----------------------------DG---------PDAEKS 137
+ + G+ ++A +F +G D + +
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP- 196
+ S +V Y K I+ AE +F +M + VSW M+ GYGQNG E+A+ F M
Sbjct: 310 IFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 197 ---EPE-----------------------------RNVVSWNTIIKALV----RCGRIED 220
EP+ ++S+ T+ ALV +CG IED
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429
Query: 221 AQWHFNQMQERERDVSSWTTIV 242
+ FN++ +D +WT +V
Sbjct: 430 SHRLFNEIS--FKDEVTWTALV 449
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
++ + CK A VF +M +++ W M+ GY + G +EA K F M E
Sbjct: 314 SALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 104 RDTRLWTTMLNGYIECGMIKE-----ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D ++++ ++E AR L G + +VS + +V Y K IE++
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVS--NALVTLYGKCGSIEDSH 431
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALVR 214
RLF E+ + +V+W ++ GY Q G+ + + LF M +P++ V++ ++ A R
Sbjct: 432 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDK--VTFIGVLSACSR 489
Query: 215 CGRIEDAQWHFNQM 228
G +E F M
Sbjct: 490 AGLVEKGNQIFESM 503
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 41/241 (17%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ ++ + I K G+ ARKVF+++ ER++ W M+ GY+ G + +A+K+FD
Sbjct: 146 LDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFD 205
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
M R+ W M+ G+++ G + AR +FD EK+V +++TMV+GY K +E +
Sbjct: 206 GMPLRNVASWNAMIRGFVKVGDLSSARGVFDSM-PEKNVVSFTTMVDGYAKAGDMESSRF 264
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNV------------- 202
LF + E+ V+W+ ++ GY QNG+ +AL +F M P+ V
Sbjct: 265 LFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGD 324
Query: 203 ----------VSWNTI-------IKALV----RCGRIEDAQWHFNQMQERERDVSSWTTI 241
V N+I I ALV +CG +E A F +M ERD+ S+ ++
Sbjct: 325 LKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMP--ERDLVSYCSM 382
Query: 242 V 242
+
Sbjct: 383 I 383
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 105/226 (46%), Gaps = 45/226 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I K G AR VFD MPE+++ + TM++GY K G ++ +R LF+Q AE+D
Sbjct: 216 NAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMVDGYAKAGDMESSRFLFEQAAEKDVV 275
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTM-----------VNGYV 149
W+ +++GY++ G EA K+F PD V S V+ YV
Sbjct: 276 TWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDSYV 335
Query: 150 KINQI---------------------EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
N I E A +LF EMPER VS+ M+ G+ +G E A
Sbjct: 336 GNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMPERDLVSYCSMIHGFSIHGHGEDA 395
Query: 189 LDLFRRM----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
++LF RM P+ ++ ++ A G I+ +FN M+E
Sbjct: 396 VNLFNRMLMEGIVPDE--AAFTIVLTACSHSGLIDKGWKYFNSMEE 439
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 35/241 (14%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+H+H + T P YP TF LN + IS K G +A KVFDQMP
Sbjct: 40 LHSHIIKTLP----YP-------ETFLLN-------NLISSYAKLGSIPYACKVFDQMPH 81
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF--- 129
++ W+T+++ Y K G + E LFD M RD W ++++GY CG+I ++ K +
Sbjct: 82 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 141
Query: 130 ---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQ 181
DG + T+ST++ K ++ ++ + + +S+ + +G Y +
Sbjct: 142 LKNDGSFNLNRI-TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY-VFVGSPLVDMYSK 199
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
G I A +F + PE+NVV +NT+I L+RCGR+ED++ F +M RERD SWT++
Sbjct: 200 MGMISCARKVFDEL--PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM--RERDSISWTSM 255
Query: 242 V 242
+
Sbjct: 256 I 256
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 77/263 (29%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G ARKVFD++PE+++ +++T+I G ++CG ++++++LF +M ERD+ WT+M+ G
Sbjct: 199 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 258
Query: 116 YIECGMIKEARKLF-----------------------------DG---------PDAEKS 137
+ + G+ ++A +F +G D + +
Sbjct: 259 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDN 318
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP- 196
+ S +V Y K I+ AE +F +M + VSW M+ GYGQNG E+A+ F M
Sbjct: 319 IFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 378
Query: 197 ---EPE-----------------------------RNVVSWNTIIKALV----RCGRIED 220
EP+ ++S+ T+ ALV +CG IED
Sbjct: 379 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 438
Query: 221 AQWHFNQMQERERDVSSWTTIVD 243
+ FN++ +D +WT +V
Sbjct: 439 SHRLFNEIS--FKDEVTWTALVS 459
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
++ + CK A VF +M +++ W M+ GY + G +EA K F M E
Sbjct: 323 SALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 382
Query: 104 RDTRLWTTMLNGYIECGMIKE-----ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D ++++ ++E AR L G + +VS + +V Y K IE++
Sbjct: 383 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVS--NALVTLYGKCGSIEDSH 440
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALVR 214
RLF E+ + +V+W ++ GY Q G+ + + LF M +P++ V++ ++ A R
Sbjct: 441 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDK--VTFIGVLSACSR 498
Query: 215 CGRIEDAQWHFNQM 228
G +E F M
Sbjct: 499 AGLVEKGNQIFESM 512
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 35/241 (14%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+H+H + T P YP TF LN + IS K G +A KVFDQMP
Sbjct: 40 LHSHIIKTLP----YP-------ETFLLN-------NLISSYAKLGSIPYACKVFDQMPH 81
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF--- 129
++ W+T+++ Y K G + E LFD M RD W ++++GY CG+I ++ K +
Sbjct: 82 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 141
Query: 130 ---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQ 181
DG + T+ST++ K ++ ++ + + +S+ + +G Y +
Sbjct: 142 LKNDGSFNLNRI-TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSY-VFVGSPLVDMYSK 199
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
G I A +F + PE+NVV +NT+I L+RCGR+ED++ F +M RERD SWT++
Sbjct: 200 MGMISCARKVFDEL--PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM--RERDSISWTSM 255
Query: 242 V 242
+
Sbjct: 256 I 256
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 77/263 (29%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G ARKVFD++PE+++ +++T+I G ++CG ++++++LF +M ERD+ WT+M+ G
Sbjct: 199 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 258
Query: 116 YIECGMIKEARKLF-----------------------------DG---------PDAEKS 137
+ + G+ ++A +F +G D + +
Sbjct: 259 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDN 318
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP- 196
+ S +V Y K I+ AE +F +M + VSW M+ GYGQNG E+A+ F M
Sbjct: 319 IFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 378
Query: 197 ---EPE-----------------------------RNVVSWNTIIKALV----RCGRIED 220
EP+ ++S+ T+ ALV +CG IED
Sbjct: 379 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 438
Query: 221 AQWHFNQMQERERDVSSWTTIVD 243
+ FN++ +D +WT +V
Sbjct: 439 SHRLFNEIS--FKDEVTWTALVS 459
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
++ + CK A VF +M +++ W M+ GY + G +EA K F M E
Sbjct: 323 SALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 382
Query: 104 RDTRLWTTMLNGYIECGMIKE-----ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
D ++++ ++E AR L G + +VS + +V Y K IE++
Sbjct: 383 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVS--NALVTLYGKCGSIEDSH 440
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALVR 214
RLF E+ + +V+W ++ GY Q G+ + + LF M +P++ V++ ++ A R
Sbjct: 441 RLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDK--VTFIGVLSACSR 498
Query: 215 CGRIEDAQWHFNQM 228
G +E F M
Sbjct: 499 AGLVEKGNQIFESM 512
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 17/239 (7%)
Query: 11 ILMHAHKLNTHPLIHGYPF---LRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVF 67
+L ++ TH PF ++ +S+ SLN +F++ L K + D AR VF
Sbjct: 1 MLKFTSQITTHLKCRTTPFTTLIQNPKSSSTSLNF------TFLNHL-KNQKLDSARAVF 53
Query: 68 DQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE--RDTRLWTTMLNGYIECGMIKEA 125
+++P + L+ ++ Y + EA LF+Q+ +DT W +++ I C A
Sbjct: 54 NKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTA 113
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE-RKDVS-WNIMMGGYGQNG 183
KLFD S+S W+T+++G++ ++ EAER F MP KDV+ WN M+ GY NG
Sbjct: 114 VKLFDEMPQRNSIS-WTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNG 172
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ AL LF +M P R+V+SW +II L R G+ A + F M S TT+V
Sbjct: 173 RVNDALRLFCQM--PSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLV 229
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 92/161 (57%), Gaps = 3/161 (1%)
Query: 63 ARKVFDQMPE--RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECG 120
A +F+Q+P +D W+++I I C A KLFD+M +R++ WTT+++G++ G
Sbjct: 80 AINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTG 139
Query: 121 MIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
+ EA + F+ P +K V+TW+ MVNGY ++ +A RLF +MP R +SW ++ G
Sbjct: 140 RVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGL 199
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
+NG+ +AL F+ M +S T++ L +I D
Sbjct: 200 DRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILD 240
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Query: 75 MRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDA 134
M + + I ++KC L T L T LN +++ + AR +F+ +
Sbjct: 1 MLKFTSQITTHLKC-RTTPFTTLIQNPKSSSTSLNFTFLN-HLKNQKLDSARAVFNKIPS 58
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPE--RKDVSWNIMMGGYGQNGQIEKALDLF 192
VS ++ ++ Y N + EA LF ++P + +SWN ++ A+ LF
Sbjct: 59 PH-VSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLF 117
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
MP+ RN +SW TII + GR+ +A+ FN M ++DV++W +V+
Sbjct: 118 DEMPQ--RNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVN 166
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 119/198 (60%), Gaps = 8/198 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS ++ + G H++ +F+ +P +++ W+++I I+ I +A F M E++
Sbjct: 64 NSMLTAYWQNGFLQHSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVA 123
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKI---NQIEEAERLFYEM 164
+ M++G+++ G ++EA+K+F+ +V +++ M++GY+K+ + I+ A LF M
Sbjct: 124 SYNAMMSGFVKMGRVEEAKKVFE-EIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAM 182
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWH 224
P R +VSW +M+ G +NG E+A ++F RM P++NVV++ +I + G+I++A W+
Sbjct: 183 PSRNEVSWTVMISGLVENGLHEEAWEVFVRM--PQKNVVAFTAMITGFCKQGKIDEA-WN 239
Query: 225 FNQMQERERDVSSWTTIV 242
Q Q R +D + W ++
Sbjct: 240 LFQ-QIRCKDRACWNIMI 256
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWT 110
IS L + G + A +VF +MP++++ + MI G+ K G I EA LF Q+ +D W
Sbjct: 194 ISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWN 253
Query: 111 TMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
M+ G+ + G +EA LF PD VS + T +++ + L +
Sbjct: 254 IMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLF-TACASLALLDEGRQTNALAIK 312
Query: 164 MPERKDVSW-NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
D+S N ++ Y + G+I + F ++ P+ +VSWNTII A + G + A+
Sbjct: 313 HGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPD--IVSWNTIIAAFAQHGLYDRAR 370
Query: 223 WHFNQM 228
++F+ M
Sbjct: 371 YYFDHM 376
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ER 104
+ I+ CK+G+ D A +F Q+ +D W+ MI G+ + G +EA LF QM +
Sbjct: 223 AMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQP 282
Query: 105 DTRLWTTMLNGYIECGMIKEARK-----LFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
D + ++ ++ E R+ + G +++ SVS + +V Y K +I +E
Sbjct: 283 DDLTFVSLFTACASLALLDEGRQTNALAIKHGLNSDLSVS--NALVTMYSKCGEIVISEL 340
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
F ++ VSWN ++ + Q+G ++A F M + +++ ++ A R G+
Sbjct: 341 AFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGK 400
Query: 218 IEDAQWHFNQMQER 231
+++ F+ M +
Sbjct: 401 VDETVNLFDLMVHK 414
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 17/158 (10%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LA LN+++ N+ ++ K G + FDQ+ D+ W+T+I + + G+
Sbjct: 309 LAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLYDR 368
Query: 94 ARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD--------GPDAEKSVSTW 141
AR FD M D + +L+ G + E LFD P +E +
Sbjct: 369 ARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEH----Y 424
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGG 178
S +V+ + Q+ A ++ EMP D S W + G
Sbjct: 425 SCVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVG 462
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 115/225 (51%), Gaps = 47/225 (20%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER 104
+ +S G + ++V +++ E++MR L + +++ Y+KC + +AR+LFD+MA +
Sbjct: 250 AVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK 309
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
D WT+M+NGY +CG ++ AR+ FD + +V WS M+ GY + N+ +E+ +LF+EM
Sbjct: 310 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV-CWSAMIAGYSQNNKPKESLKLFHEM 368
Query: 165 PERKDV----------------------SW------------------NIMMGGYGQNGQ 184
ER V W N ++ Y + G
Sbjct: 369 MERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGS 428
Query: 185 IEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
I+ A ++F M PERN++SWNT+I GR + A F+QM+
Sbjct: 429 IDAATEVFSTM--PERNLISWNTMIAGYAANGRAKQAINVFDQMR 471
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 41/210 (19%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
AR++FD+M +D+ W +M+NGY KCG ++ AR+ FDQ ++ W+ M+ GY +
Sbjct: 299 ARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKP 358
Query: 123 KEARKLFD---------------------------------------GPDAEKSVSTWST 143
KE+ KLF G SV+ +
Sbjct: 359 KESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENA 418
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
+V+ Y K I+ A +F MPER +SWN M+ GY NG+ ++A+++F +M E N
Sbjct: 419 IVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPN 478
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+++ +++ A G I + + +F+ M+ +
Sbjct: 479 NITFVSLLTACSHGGLISEGREYFDNMERK 508
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 43/211 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N I + G +AR+VFD+ ++D+ W TMI+GY +EA ++F+ M
Sbjct: 183 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 242
Query: 102 -----------------------------AERDTR----LWTTMLNGYIECGMIKEARKL 128
E++ R L +L+ Y++C + +AR+L
Sbjct: 243 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 302
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
FD A K V +W++MVNGY K +E A R F + P + V W+ M+ GY QN + +++
Sbjct: 303 FDRM-ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKES 361
Query: 189 LDLFRRMPEPERNVVSW-NTIIKALVRCGRI 218
L LF M ER VV +T++ L CG++
Sbjct: 362 LKLFHEM--MERGVVPIEHTLVSVLSACGQL 390
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ + K G D A +VF MPER++ W+TMI GY G K+A +FDQM E
Sbjct: 417 NAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFE 476
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAER 159
+ + ++L G+I E R+ FD + + + ++ MV+ + +EEA +
Sbjct: 477 PNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYK 536
Query: 160 LFYEMPERK-DVSWNIMMGGYGQNGQIE----KALDLFRRMPE 197
L MP + + +W ++ +G +E A +L R PE
Sbjct: 537 LIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPE 579
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 40/191 (20%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-------G 131
+ +I+ Y + G++K AR++FD+ +++D WTTM++GY +EA ++F+
Sbjct: 183 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 242
Query: 132 PDA-----------------------EK--------SVSTWSTMVNGYVKINQIEEAERL 160
P+ EK S+S + +++ YVK + + +A L
Sbjct: 243 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 302
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F M + SW M+ GY + G +E A F + P +N V W+ +I + + ++
Sbjct: 303 FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQ--TPRKNAVCWSAMIAGYSQNNKPKE 360
Query: 221 AQWHFNQMQER 231
+ F++M ER
Sbjct: 361 SLKLFHEMMER 371
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 60/241 (24%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK----------LFDQMAE 103
L G +A +F+++ + + +W+TMI GY + ARK +F E
Sbjct: 88 LAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGY------QNARKPIFAFSFFVYMFQLRVE 141
Query: 104 RDTRLWTTML-------------------------------NG----YIECGMIKEARKL 128
D+R + L NG Y E G++K AR++
Sbjct: 142 MDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQV 201
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQNGQ 184
FD ++K V TW+TM++GY + EEA +F M E +V+ ++ G
Sbjct: 202 FD-ESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGN 260
Query: 185 IEKALDLFRRMPEPE-RNVVSW-NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+E + ++ E R +S N ++ V+C + DA+ F++M +DV SWT++V
Sbjct: 261 LEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA--TKDVYSWTSMV 318
Query: 243 D 243
+
Sbjct: 319 N 319
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 115/225 (51%), Gaps = 47/225 (20%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER 104
+ +S G + ++V +++ E++MR L + +++ Y+KC + +AR+LFD+MA +
Sbjct: 200 AVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK 259
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
D WT+M+NGY +CG ++ AR+ FD + +V WS M+ GY + N+ +E+ +LF+EM
Sbjct: 260 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV-CWSAMIAGYSQNNKPKESLKLFHEM 318
Query: 165 PERKDV----------------------SW------------------NIMMGGYGQNGQ 184
ER V W N ++ Y + G
Sbjct: 319 MERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGS 378
Query: 185 IEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
I+ A ++F M PERN++SWNT+I GR + A F+QM+
Sbjct: 379 IDAATEVFSTM--PERNLISWNTMIAGYAANGRAKQAINVFDQMR 421
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 41/210 (19%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
AR++FD+M +D+ W +M+NGY KCG ++ AR+ FDQ ++ W+ M+ GY +
Sbjct: 249 ARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKP 308
Query: 123 KEARKLFD---------------------------------------GPDAEKSVSTWST 143
KE+ KLF G SV+ +
Sbjct: 309 KESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENA 368
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
+V+ Y K I+ A +F MPER +SWN M+ GY NG+ ++A+++F +M E N
Sbjct: 369 IVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPN 428
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+++ +++ A G I + + +F+ M+ +
Sbjct: 429 NITFVSLLTACSHGGLISEGREYFDNMERK 458
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 43/211 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N I + G +AR+VFD+ ++D+ W TMI+GY +EA ++F+ M
Sbjct: 133 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 192
Query: 102 -----------------------------AERDTR----LWTTMLNGYIECGMIKEARKL 128
E++ R L +L+ Y++C + +AR+L
Sbjct: 193 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 252
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
FD A K V +W++MVNGY K +E A R F + P + V W+ M+ GY QN + +++
Sbjct: 253 FDRM-ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKES 311
Query: 189 LDLFRRMPEPERNVVSW-NTIIKALVRCGRI 218
L LF M ER VV +T++ L CG++
Sbjct: 312 LKLFHEM--MERGVVPIEHTLVSVLSACGQL 340
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ + K G D A +VF MPER++ W+TMI GY G K+A +FDQM E
Sbjct: 367 NAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFE 426
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAER 159
+ + ++L G+I E R+ FD + + + ++ MV+ + +EEA +
Sbjct: 427 PNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYK 486
Query: 160 LFYEMPERK-DVSWNIMMGGYGQNGQIE----KALDLFRRMPE 197
L MP + + +W ++ +G +E A +L R PE
Sbjct: 487 LIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPE 529
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF--------- 129
+ +I+ Y + G++K AR++FD+ +++D WTTM++GY +EA ++F
Sbjct: 133 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 192
Query: 130 -----------------------------DGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ + S+S + +++ YVK + + +A L
Sbjct: 193 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 252
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F M + SW M+ GY + G +E A F + P +N V W+ +I + + ++
Sbjct: 253 FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQ--TPRKNAVCWSAMIAGYSQNNKPKE 310
Query: 221 AQWHFNQMQER 231
+ F++M ER
Sbjct: 311 SLKLFHEMMER 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 60/241 (24%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK----------LFDQMAE 103
L G +A +F+++ + + +W+TMI GY + ARK +F E
Sbjct: 38 LAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGY------QNARKPIFAFSFFVYMFQLRVE 91
Query: 104 RDTRLWTTML-------------------------------NG----YIECGMIKEARKL 128
D+R + L NG Y E G++K AR++
Sbjct: 92 MDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQV 151
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQNGQ 184
FD ++K V TW+TM++GY + EEA +F M E +V+ ++ G
Sbjct: 152 FD-ESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGN 210
Query: 185 IEKALDLFRRMPEPE-RNVVSW-NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+E + ++ E R +S N ++ V+C + DA+ F++M +DV SWT++V
Sbjct: 211 LEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA--TKDVYSWTSMV 268
Query: 243 D 243
+
Sbjct: 269 N 269
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ + K G AR VFD M +RD+ W MI GY K G + +AR LFD M ER++
Sbjct: 155 ALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFT 214
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
WTTM+ GY G +K A +L+D + ++ V TW M+ GY K+ + EA R+F E+P
Sbjct: 215 WTTMVAGYANYGDMKAAMELYDVMNGKEEV-TWVAMIAGYGKLGNVSEARRIFDEIPVPL 273
Query: 169 DVS-WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
+ S ++ Y QNG +A++++ +M + V ++ A+ C ++ D
Sbjct: 274 NPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDV-AMVGAISACAQLRD 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 110 TTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
T +L+ Y +CG + +AR +FDG ++ V W+ M+ GY K ++ +A LF M ER
Sbjct: 154 TALLDMYAKCGYVCDARDVFDGM-VDRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNS 212
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+W M+ GY G ++ A++L+ M E V+W +I + G + +A+ F+++
Sbjct: 213 FTWTTMVAGYANYGDMKAAMELYDVMNGKEE--VTWVAMIAGYGKLGNVSEARRIFDEI 269
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 134/296 (45%), Gaps = 87/296 (29%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IH + F +T L S + ++ NSF+ + GR D RK+FD++ ERD W+ MI+
Sbjct: 125 IHAFVF-KTGLDSDYYVS------NSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMIS 177
Query: 84 GYIKCGMIKEARKLFDQM---------------------AERDT---------------- 106
G +KC +EA ++F +M A R+
Sbjct: 178 GCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELD 237
Query: 107 ---RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
R+ +L+ Y +CG + AR++FDG EK+V+ W++MV GYV ++++A LF +
Sbjct: 238 FTMRMGNALLDMYCKCGYVSVAREIFDGM-IEKNVNCWTSMVTGYVSCGELDKARDLFDK 296
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPER------------------- 200
P R V W M+ GY Q + ++A+ LF M +P++
Sbjct: 297 SPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHG 356
Query: 201 --------------NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ V ++I+ +CG +E + FN + +E+D +SWT+I+
Sbjct: 357 RWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGL--KEKDTASWTSII 410
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 44/232 (18%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ M+ N+ + CK G AR++FD M E+++ W +M+ GY+ CG + +AR LFD
Sbjct: 236 LDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFD 295
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVS------------- 139
+ RD LWT M+NGY++ EA LF+ PD V+
Sbjct: 296 KSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEH 355
Query: 140 ------------------TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
++++ Y K +E++ +F + E+ SW ++ G
Sbjct: 356 GRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAM 415
Query: 182 NGQIEKALDLFRRM----PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
NG+ +AL+LF M +P+ V++ ++ A G +E+ F+ M
Sbjct: 416 NGKTIEALELFEEMKIFGAKPDD--VTFIVLLNACSHGGLVEEGHKLFHSMS 465
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDT 80
+P + YPF+ +A FI+ ++G HA VF + D + ++
Sbjct: 100 YPDNYTYPFVLKAVA--------------FIADF-RQGTKIHAF-VFKTGLDSDYYVSNS 143
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD----GPDAEK 136
++ Y + G I RKLFD+++ERD+ W M++G ++C +EA ++F + +
Sbjct: 144 FMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKI 203
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQNGQIEKALDL 191
S +T + + +E + + + E K++ + + MG Y + G + A ++
Sbjct: 204 SEATVVSSLTACAASRNVEVGKEIHGFIIE-KELDFTMRMGNALLDMYCKCGYVSVAREI 262
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
F M E +NV W +++ V CG ++ A+ F+ + RDV WT +++
Sbjct: 263 FDGMIE--KNVNCWTSMVTGYVSCGELDKARDLFD--KSPTRDVVLWTAMIN 310
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AER 104
S I K G + + +VF+ + E+D W ++I G G EA +LF++M A+
Sbjct: 377 SLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKP 436
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDA----EKSVSTWSTMVNGYVKINQIEEAERL 160
D + +LN G+++E KLF E ++ + ++ + + EAE L
Sbjct: 437 DDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEEL 496
Query: 161 FYEMPERKDVSWNIMMGGY 179
++P++K+ + + G +
Sbjct: 497 IKKLPDQKNETIVAIYGSF 515
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ + K G AR VFD + +RD+ W MI GY K G + +AR LFD M ER++
Sbjct: 155 ALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFT 214
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
WTTM+ GY G +K A +L+D + + V TW M+ GY K+ + EA R+F E+
Sbjct: 215 WTTMVAGYANYGDMKAAMELYDVMNGKDEV-TWVAMIAGYGKLGNVSEARRIFDEIT--- 270
Query: 169 DVSWN-----IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
V WN ++ Y QNG +A++++ +M + V ++ A+ C ++ D
Sbjct: 271 -VPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDV-AMVGAISACAQLRD 325
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 8/200 (4%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ I K GR AR +FD M ER+ W TM+ GY G +K A +L+D M +D
Sbjct: 186 AMICGYAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVT 245
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
W M+ GY + G + EAR++FD + ST + ++ Y + EA ++ +M K
Sbjct: 246 WVAMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAK 305
Query: 169 ----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQ 222
DV+ + Q I + L + E E+ + N +I +CG I+ A
Sbjct: 306 IKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAW 365
Query: 223 WHFNQMQERERDVSSWTTIV 242
FN M R RD+ +++ ++
Sbjct: 366 REFNIM--RNRDLYTYSAMI 383
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 62 HARKVFDQMPE-RDMRLWDTMINGYIK-----CGMIKEARKLFDQMAERDTRLWTTMLNG 115
+A K+FD MP + +W ++I ++ C I ++ + ++ +LN
Sbjct: 65 YAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNA 124
Query: 116 YIECGMIK--------EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
CG + AR + G K V T +++ Y K + +A +F + +R
Sbjct: 125 ---CGRVPAGFEGKQVHARLVQSGFLGNKIVQT--ALLDMYAKCGHVCDARDVFDGIVDR 179
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
V+W M+ GY + G++ A LF M ERN +W T++ G ++ A ++
Sbjct: 180 DVVAWTAMICGYAKAGRMVDARFLFDNM--GERNSFTWTTMVAGYANYGDMKAAMELYDV 237
Query: 228 MQERERDVSSWTTIV 242
M +D +W ++
Sbjct: 238 MN--GKDEVTWVAMI 250
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 47/250 (18%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HGY LRT + + + N+ I+ K R AR+VFD+MP RD+ W+ +++
Sbjct: 309 VHGY-ILRTVVEPSHHFVLSVN--NALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLS 365
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE-------- 135
GY+ I+EA +F +M ER+ WT M++G + G +E KLF+ +E
Sbjct: 366 GYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYA 425
Query: 136 ------------------------------KSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+S + ++ Y + +E AE +F MP
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP 485
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDA 221
VSWN M+ Q+G KA++LF +M + P+R +++ TI+ A G I++
Sbjct: 486 YVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDR--ITFLTILTACNHAGLIKEG 543
Query: 222 QWHFNQMQER 231
+ +F+ M R
Sbjct: 544 RHYFDTMCTR 553
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 50/216 (23%)
Query: 63 ARKVFDQMPERDMR--LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI--- 117
ARKVFD+ P+ + W TMI GY++ + AR+L D + W M++GY+
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262
Query: 118 -----------------------------ECGMIKEARKLFDG--------------PDA 134
CG E +F+ P
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+S + ++ Y K +++ EA R+F +MP R +SWN ++ GY +IE+A +F
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSE 382
Query: 195 MPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
M PERNV++W +I L + G E+ FNQM+
Sbjct: 383 M--PERNVLTWTVMISGLAQNGFGEEGLKLFNQMKS 416
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 101/278 (36%), Gaps = 90/278 (32%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE--------------------- 72
L S F NT + N I+ CK +ARK+FD++P+
Sbjct: 32 LTSGFKPNTFI--LNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKL 89
Query: 73 ------------RDMRLWDTMINGYIKCGMIKEARKLFDQMA------------------ 102
RD ++ MI Y A LF QM
Sbjct: 90 AQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSAL 149
Query: 103 ------ERDTRLW----------------TTMLNGYIECG---------MIKEARKLFD- 130
ER ++ +L+ Y+ C ++ ARK+FD
Sbjct: 150 SLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDE 209
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALD 190
P + +W+TM+ GYV+ + + A L + DV+WN M+ GY + G E+A D
Sbjct: 210 TPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFD 269
Query: 191 LFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFN 226
FRRM + + ++ ++I A CG + FN
Sbjct: 270 TFRRMHSMGIQEDEYTYTSLISA---CGSCNEKMGMFN 304
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 55/294 (18%)
Query: 1 MAKKLPPLSFILMHAHKLNT---HPLIHGYPFLRTRLASTFSLN----TEMKRCNSFISR 53
+ +++ L+F L H LN LI Y L+ A + N ++ N+ +S
Sbjct: 124 LVRQVHALAFHL--GHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSS 181
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
+ G+ A+ FDQMP+R++ W T++NGY+K + +AR +FD M+ER+ WT M+
Sbjct: 182 YMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMI 241
Query: 114 NGYIECGMIKEARKLF-------------------DGPDAEKSV---------------- 138
+GY++ +A KLF D S+
Sbjct: 242 SGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIA 301
Query: 139 --STW-STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
W +++V+ Y K ++ A +F + ++ VSWN ++GGY +G +AL+ F RM
Sbjct: 302 NDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRM 361
Query: 196 P---EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVD 243
P+ V++ ++ A V G +E+ + HF M + + ++ ++ +VD
Sbjct: 362 KVVGTPDE--VTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVD 413
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N ++ + + +FD+MP +D W+ M++G+ + + + F QM
Sbjct: 44 NMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVV 103
Query: 105 -DTRLWTTMLNGYIECGM---IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ +T+L I + +++ L +V S+++ Y + + E R
Sbjct: 104 PNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRA 163
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F ++ + SWN ++ Y + G+ A F +MP+ RN++SW T++ V+ ++
Sbjct: 164 FNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQ--RNIISWTTLVNGYVKNKQVNK 221
Query: 221 AQWHFNQMQERERDVSSWTTIV 242
A+ F+ M ER+V SWT ++
Sbjct: 222 ARSVFDDMS--ERNVVSWTAMI 241
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM---AERD 105
S + K G D A VF+ + ++++ W+ +I GY G+ A + FD+M D
Sbjct: 309 SLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGTPD 368
Query: 106 TRLWTTMLNGYIECGMIKEARKLFD------GPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+ +L+ + G+++E K F G AE + +S MV+ Y + + +EAE
Sbjct: 369 EVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAE--MEHYSCMVDLYGRAGRFDEAEN 426
Query: 160 LFYEMPERKDVS-WNIMMGGYGQNGQIE 186
L MP DV W ++ G + +E
Sbjct: 427 LIKNMPFEPDVVLWGALLAACGLHSNLE 454
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 112 MLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
M+N YI+ +K+A KL D ++ +W+ ++ Y++ NQI LF +MP + VS
Sbjct: 14 MINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVS 73
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
WNIM+ G+ + E F +M VV + I L+R
Sbjct: 74 WNIMLSGFQRTRNSEGLYRCFLQMGRA--GVVPNDYTISTLLRA 115
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD------GPD 133
++++ Y KCG + A +F+ + +++ W ++ GY G+ A + FD PD
Sbjct: 309 SLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGTPD 368
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKA 188
V+ S V+ + +EE E+ F +M + + ++ M+ YG+ G+ ++A
Sbjct: 369 EVTFVNVLSACVHAGL----VEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEA 424
Query: 189 LDLFRRMP-EPERNVVSWNTIIKALVRCG 216
+L + MP EP+ VV W ++ A CG
Sbjct: 425 ENLIKNMPFEPD--VVLWGALLAA---CG 448
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 144 MVNGYVKINQIEEAERLFYE-MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
M+N Y+ N +++A +L E + VSWN++M Y Q+ QI DLF +M P ++
Sbjct: 14 MINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKM--PLKDA 71
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQM 228
VSWN ++ R E F QM
Sbjct: 72 VSWNIMLSGFQRTRNSEGLYRCFLQM 97
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 111/234 (47%), Gaps = 23/234 (9%)
Query: 5 LPPLSFILMHAHKLNTHPLIHGYPF-------LRTRLASTFSLNTEMKR-CN-----SFI 51
L P S+ H THP + + F + R SL M R CN SF
Sbjct: 49 LAPSSYTC-HIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFY 107
Query: 52 SRLCKEGRTDHA---RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S + K ++ V +RD + + ++ Y K G I+ ARKLFD+M +R
Sbjct: 108 SVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVAD 167
Query: 109 WTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
W M++GY +CG +EA LF + ++V TW+TM+ G+ K ++ A F +MP
Sbjct: 168 WNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP 227
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP---ERNVVSWNTIIKALVRCG 216
ER VSWN M+ GY Q G E+ + LF M P + + +W T+I + G
Sbjct: 228 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLG 281
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 46/234 (19%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----AE 103
+ I+ K+G AR FD+MPER + W+ M++GY + G +E +LF+ M +
Sbjct: 205 TMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQ 264
Query: 104 RDTRLWTT------------------------------------MLNGYIECGMIKEARK 127
D W T +L+ + +CG ++ A K
Sbjct: 265 PDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHK 324
Query: 128 LFD--GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
+F+ G +S W+ M++ Y ++ + A LF +MP+R VSWN M+ GY QNG+
Sbjct: 325 IFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGES 384
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED---AQWHFNQMQERERDVS 236
KA+ LF M E + T++ CG + + W + ++E +S
Sbjct: 385 VKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQIS 438
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 110/210 (52%), Gaps = 16/210 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM--AERD 105
N+ IS + G AR +FD+MP+RD W++MI GY + G +A KLF++M +E
Sbjct: 341 NAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDS 400
Query: 106 TRLWTTMLNGYIECGMIKE------ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
TM++ + CG + E A + + S+S ++++++ Y + +++A
Sbjct: 401 KPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVL 460
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRC 215
+F EM R VS+N ++ G+ ++G ++++L +M EP+R +++ I+ A
Sbjct: 461 IFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDR--ITYIAILTACSHA 518
Query: 216 GRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G + + Q F + + DV + ++D L
Sbjct: 519 GLLGEGQRLFESI--KFPDVDHYACMIDML 546
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
+RD + +L Y + G I+ ARKLFD PD ++V+ W+ M++GY K EEA LF
Sbjct: 131 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPD--RTVADWNVMISGYWKCGNEEEASTLF 188
Query: 162 YEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
+ M + R ++W M+ G+ + G ++ A F +MPE R+VVSWN ++ + G
Sbjct: 189 HVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPE--RSVVSWNAMLSGYAQGGA 246
Query: 218 IEDAQWHFNQM---QERERDVSSWTTIVD 243
E+ FN M + D ++W T++
Sbjct: 247 PEETIRLFNDMLSPGNVQPDETTWVTVIS 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEAR-KLFDQMAER-----DTRLWTTMLNGYIEC 119
+F D+R++ M+ Y + G+ + LF M +T ++ M+
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSE 117
Query: 120 GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
M+ A L G D + V + ++ Y K IE A +LF EMP+R WN+M+ GY
Sbjct: 118 SMLFLAHVLKSGYDRDHYVR--NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGY 175
Query: 180 GQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS 237
+ G E+A LF M + E RNV++W T+I + G ++ A+ +F++M ER V S
Sbjct: 176 WKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMP--ERSVVS 233
Query: 238 WTTIVD 243
W ++
Sbjct: 234 WNAMLS 239
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---- 129
+ +++++I+ Y +CG +++A +F +MA RD + T+++G+ E G E+ +L
Sbjct: 438 SISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMK 497
Query: 130 -DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
DG + ++ T+ ++ + E +RLF + + M+ G+ G++E+A
Sbjct: 498 EDGIEPDRI--TYIAILTACSHAGLLGEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEA 555
Query: 189 LDLFRRMP-EPERNV 202
+ L + MP EP +
Sbjct: 556 MKLIQSMPMEPHAGI 570
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 9/192 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I GR D AR +F + D+ ++TMI+GY+K G I++ARKLFD+M ERD
Sbjct: 159 NSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGGIRDARKLFDEMYERDVF 218
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
W M+ GY+ G + A++LF+ P+ K V +W+ M++G V++ + A F +M
Sbjct: 219 SWNCMIAGYVSVGDLAAAKELFEAMPN--KDVVSWNCMIDGCVRVGNVSLALEFFNQMDG 276
Query: 167 ---RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC---GRIED 220
R VSWN ++ + + + L +F RM E + + T++ L C G++
Sbjct: 277 VVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNL 336
Query: 221 AQWHFNQMQERE 232
W + ++ E
Sbjct: 337 GLWVHSYIKSNE 348
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
Query: 55 CK-EGRTDHARKV-FDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTM 112
CK EG HAR V F + D+ + +++I Y G I +AR +F + D + TM
Sbjct: 135 CKLEGEKGHARVVKFGFLS--DLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTM 192
Query: 113 LNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
++GY++ G I++ARKLFD E+ V +W+ M+ GYV + + A+ LF MP + VSW
Sbjct: 193 IDGYVKNGGIRDARKLFD-EMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSW 251
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPE-PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
N M+ G + G + AL+ F +M RNVVSWN+++ VR + F +M E
Sbjct: 252 NCMIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMES 311
Query: 232 ERDVSSWTTIVDCL 245
+ + T+V L
Sbjct: 312 GEAMPNEATLVSVL 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 47/245 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM---AER 104
N I+ G A+++F+ MP +D+ W+ MI+G ++ G + A + F+QM R
Sbjct: 221 NCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMIDGCVRVGNVSLALEFFNQMDGVVVR 280
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDG--------PDAEKSVSTWSTMVN---------- 146
+ W ++L ++ E ++F+ P+ VS + N
Sbjct: 281 NVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLWV 340
Query: 147 -GYVKINQI--------------------EEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
Y+K N+I + A +F EMP + VSWN M+ GYG +G
Sbjct: 341 HSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHGNG 400
Query: 186 EKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQ---ERERDVSSWTT 240
+KAL++F M + + N ++ ++ A G + + W+F+ M+ + E V +
Sbjct: 401 DKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVYKIEPKVEHYGC 460
Query: 241 IVDCL 245
+VD L
Sbjct: 461 MVDLL 465
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 43/255 (16%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LA+ + + N+ I G A+K+F D+ W++MI+GY+ CG +++
Sbjct: 333 LAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVED 392
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWS---- 142
A+KLFD M E+D W+ M++GY + G EA LF PD VS S
Sbjct: 393 AKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTH 452
Query: 143 ---------------------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
T+V+ Y+K +E A +FY M E+ +WN +
Sbjct: 453 MAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNAL 512
Query: 176 MGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQER-- 231
+ G NG +EK+L++F M + + N +++ ++ A G +++ + +F+ M +
Sbjct: 513 ILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHK 572
Query: 232 -ERDVSSWTTIVDCL 245
E +V + +VD L
Sbjct: 573 IEPNVKHYGCMVDLL 587
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 23/180 (12%)
Query: 19 NTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKV---FDQMPERDM 75
NT P + YP L ++ C + +S EG+ H V FD D+
Sbjct: 140 NTSPDHYTYPIL-------------LRSCTARVSE--PEGKQIHDHVVKFGFDS----DV 180
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE 135
+ +T+IN Y CG + A K+F + D W T+L GY+ G + EA ++D
Sbjct: 181 YVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDVVEAECVYDKMPVR 240
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
++++ ++M+ + K I +A LF + + VSW+ M+ Y QNG E+AL LF M
Sbjct: 241 NTIAS-NSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDM 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 7/141 (4%)
Query: 93 EARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGY 148
E +++ D + + D + T++N Y CG + A K+F VS W+T++ GY
Sbjct: 163 EGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVS-WNTLLAGY 221
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
V + + EAE ++ +MP R ++ N M+ +G+ G I KA LF R+ +++VSW+ +
Sbjct: 222 VNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRI--EGKDMVSWSAM 279
Query: 209 IKALVRCGRIEDAQWHFNQMQ 229
I + G E+A F M
Sbjct: 280 ISCYEQNGMCEEALVLFVDMN 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 16/191 (8%)
Query: 14 HAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER 73
H L+ IH Y S N + + + K G ++A +VF M E+
Sbjct: 452 HMAALDLGKWIHAY-------ISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEK 504
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLF 129
+ W+ +I G G+++++ +F M + T + +L G++ E R+ F
Sbjct: 505 GVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYF 564
Query: 130 DG----PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQ 184
E +V + MV+ + ++EAE L MP DV+ W ++G ++
Sbjct: 565 SSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGALLGACRKHHN 624
Query: 185 IEKALDLFRRM 195
E L R++
Sbjct: 625 NEMGERLGRKL 635
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 40/211 (18%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G D ARK++D + + + + M++GY K GM+K+AR +FDQM ERD W+ M++GY
Sbjct: 271 GAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYA 330
Query: 118 ECGMIKEARKLFD------------------------GPDAE--------------KSVS 139
E +EA KLFD G A+ +++S
Sbjct: 331 ESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALS 390
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP- 198
+ +++ Y K + +A +F MP + +SW+ M+ + +G + A+ LFRRM E
Sbjct: 391 VNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVN 450
Query: 199 -ERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
E N V++ ++ A G +E+ + F+ M
Sbjct: 451 IEPNGVTFIGVLYACGHAGLVEEGEKLFSSM 481
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 43/212 (20%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
GRT H V D D L +IN Y CG + ARK++D ++ + + T ML+GY
Sbjct: 241 GRTIH-EFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYA 299
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV------- 170
+ GM+K+AR +FD E+ + WS M++GY + +Q +EA +LF EM +++ V
Sbjct: 300 KLGMVKDARFIFDQM-IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITML 358
Query: 171 ---------------SW-----------------NIMMGGYGQNGQIEKALDLFRRMPEP 198
+W N ++ Y + G + KA ++F M P
Sbjct: 359 SVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM--P 416
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+NV+SW+++I A G + A F +M+E
Sbjct: 417 RKNVISWSSMINAFAMHGNADSAIKLFRRMKE 448
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 44/203 (21%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER------------------ 104
AR +FD+M D W+ +I+GY + G +A +LF+ M
Sbjct: 175 ARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGH 234
Query: 105 ---------------------DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST 143
D+ L T ++N Y CG + ARK++DG + K + +
Sbjct: 235 AGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGL-SSKHLIVSTA 293
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV- 202
M++GY K+ +++A +F +M ER V W+ M+ GY ++ Q ++AL LF M + +R+V
Sbjct: 294 MLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQ-KRSVP 352
Query: 203 --VSWNTIIKALVRCGRIEDAQW 223
++ ++I A G + A W
Sbjct: 353 DQITMLSVISACSHVGALAQANW 375
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IH Y R+ S+N N+ I K G AR+VF+ MP +++ W +MIN
Sbjct: 376 IHTY-VDRSGFGRALSVN------NALIDMYAKCGNLVKAREVFENMPRKNVISWSSMIN 428
Query: 84 GYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVS 139
+ G A KLF +M E + + +L G+++E KLF E +S
Sbjct: 429 AFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGIS 488
Query: 140 T----WSTMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRR 194
+ MV+ Y + N + +A L MP +V W +M +G+ E +R
Sbjct: 489 PTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKR 548
Query: 195 MPEPE 199
+ E E
Sbjct: 549 LLELE 553
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PD 133
+I Y C I +AR LFD+M D W +++GY + G +A +LF+ PD
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPD 221
Query: 134 AEKSVSTWS-------------------------------TMVNGYVKINQIEEAERLFY 162
+ + S ++N Y ++ A +++
Sbjct: 222 SVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYD 281
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
+ + + M+ GY + G ++ A +F +M ER++V W+ +I + ++A
Sbjct: 282 GLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM--IERDLVCWSAMISGYAESDQPQEAL 339
Query: 223 WHFNQMQERERDVSSWTTIVDCL 245
F++M ++ R V T++ +
Sbjct: 340 KLFDEMLQK-RSVPDQITMLSVI 361
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 25/235 (10%)
Query: 5 LPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTE---------MKRCN-----SF 50
L P S+ H THP + + F+ + S ++++ ++ C+ SF
Sbjct: 34 LAPSSYTC-HIFHAATHPDVRVFTFM-LKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASF 91
Query: 51 ISRLCKEGRTDHA---RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
S + K ++ V +RD + + ++ Y K G I+ ARKLFD+M +R
Sbjct: 92 YSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVA 151
Query: 108 LWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
W M++GY +CG +EA LF + ++V TW+TM+ G+ K ++ A F +M
Sbjct: 152 DWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKM 211
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP---ERNVVSWNTIIKALVRCG 216
PER VSWN M+ GY Q G E+ + LF M P + + +W T+I + G
Sbjct: 212 PERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLG 266
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 113/241 (46%), Gaps = 49/241 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF----DQMAE 103
N + K G + ARK+FD+MP+R + W+ MI+GY KCG +EA LF DQ
Sbjct: 123 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 182
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
R+ WTTM+ G+ + G +K AR FD E+SV +W+ M++GY + EE RLF +
Sbjct: 183 RNVITWTTMITGHAKKGNLKTARMYFD-KMPERSVVSWNAMLSGYAQGGAPEETIRLFND 241
Query: 164 MPERKDV-----SWNIMMGG------------------------------------YGQN 182
M +V +W ++ + +
Sbjct: 242 MLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKC 301
Query: 183 GQIEKALDLFRRMPEPE-RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
G +E A +F ++ + R+ V WN +I A R G + A+ F++M +RD SW ++
Sbjct: 302 GNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMP--QRDTVSWNSM 359
Query: 242 V 242
+
Sbjct: 360 I 360
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 84/278 (30%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----A 102
+ I+ K+G AR FD+MPER + W+ M++GY + G +E +LF+ M
Sbjct: 189 TTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNV 248
Query: 103 ERDTRLWTT------------------------------------MLNGYIECGMIKEAR 126
+ D W T +L+ + +CG ++ A
Sbjct: 249 QPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAH 308
Query: 127 KLFD--GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
K+F+ G +S W+ M++ Y ++ + A+ LF +MP+R VSWN M+ GY QNG+
Sbjct: 309 KIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGE 368
Query: 185 IEKALDLFRRMPEPER---------------------------------------NVVSW 205
KA+ LF M E ++ +
Sbjct: 369 SFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVY 428
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
N++I RCG ++DA F +M RD+ S+ T++
Sbjct: 429 NSLINMYSRCGSMQDAVLIFQEMA--TRDLVSYNTLIS 464
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
N+ IS + G A+ +FD+MP+RD W++MI GY + G +A KLF++M + D+
Sbjct: 326 NAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDS 385
Query: 107 RL--WTTMLNGYIECGMIKE------ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
R TM++ + CG + E A + + S+S +++++N Y + +++A
Sbjct: 386 RKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAV 445
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVR 214
+F EM R VS+N ++ G+ ++G ++++L +M EP+R +++ I+ A
Sbjct: 446 LIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDR--ITYIAILTACSH 503
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G +++ Q F + + DV + ++D L
Sbjct: 504 AGLLDEGQRLFESI--KFPDVDHYACMIDML 532
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 97 LFDQMAERDTRLWTTMLNGYIECGMIKEA-----RKLFDGPDAEKSVSTWSTMVNGYVKI 151
+F D R++T ML Y + G+ + + + D + + S +S M+
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+ + A L +R N ++G Y + G IE A LF MP+ R V WN +I
Sbjct: 103 SMLFLAHVL-KSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPD--RTVADWNVMISG 159
Query: 212 LVRCGRIEDAQWHFNQM--QERERDVSSWTTIV 242
+CG E+A F+ M QE R+V +WTT++
Sbjct: 160 YWKCGNEEEASTLFHVMGDQEISRNVITWTTMI 192
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---- 129
+ +++++IN Y +CG +++A +F +MA RD + T+++G+ E G E+ +L
Sbjct: 424 SISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMK 483
Query: 130 -DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
DG + ++ T+ ++ ++E +RLF + + M+ G+ G++E+A
Sbjct: 484 EDGIEPDRI--TYIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEA 541
Query: 189 LDLFRRMP-EPERNV 202
+ L + MP EP +
Sbjct: 542 MKLIQSMPMEPHAGI 556
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 45/249 (18%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
+T S ++E +R I C++ R A ++P+ RL+ T+I ++ ++ +
Sbjct: 24 TTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGK 83
Query: 96 KLFDQMAERD----TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKI 151
++ + + +++ Y +CG + +A+ LFD +K + +W+TM++GY +
Sbjct: 84 RVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFD-EIPQKDLCSWNTMISGYANV 142
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER----------- 200
+IE+A +LF EMP R + SWN ++ GY G +ALDLFR M E E
Sbjct: 143 GRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSA 202
Query: 201 ---------------------------NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
+ V W ++ +CG + +A+ F+QM ++
Sbjct: 203 LAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA--DK 260
Query: 234 DVSSWTTIV 242
D+ SWTT++
Sbjct: 261 DIVSWTTMI 269
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I K G A+ +FD++P++D+ W+TMI+GY G I++ARKLFD+M RD
Sbjct: 102 NRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNF 161
Query: 108 LWTTMLNGYIECGMIKEARKLFD-GPDAEKSVSTWSTMVNGYVKINQIEEAER------- 159
W +++GY+ G EA LF + E S T+ + I R
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
L E +V W ++ YG+ G + +A +F +M ++++VSW T+I GR
Sbjct: 222 LIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQM--ADKDIVSWTTMIHRCFEDGR 277
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 47/219 (21%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD- 130
E D +W +++ Y KCG + EAR +FDQMA++D WTTM++ E G KE LF
Sbjct: 228 ELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRD 287
Query: 131 --GPDAEKSVSTWSTMVNG-----------------------------------YVKINQ 153
G + T++ ++N Y K
Sbjct: 288 LMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGN 347
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF----RRMPEPERNVVSWNTII 209
E A R+F +MP VSW ++ GY QNGQ + AL F R +P+ +++ ++
Sbjct: 348 TETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDE--ITFVGVL 405
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSS---WTTIVDCL 245
A G ++ +F+ ++E+ V + + ++D L
Sbjct: 406 SACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLL 444
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 24 IHGYPFLRTRLA-STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
+HGY TR+ FS ++ + K G T+ AR+VF+QMP D+ W ++I
Sbjct: 319 VHGY---MTRVGYDPFSFAA-----SALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLI 370
Query: 83 NGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAE--- 135
GY + G A + F+ + T+ + +L+ G++ + F +
Sbjct: 371 VGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGL 430
Query: 136 -KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIE----KAL 189
+ ++ +++ + + +EAE + MP + D W ++GG +G IE A
Sbjct: 431 VHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAK 490
Query: 190 DLFRRMPEPERNVVSWNTI 208
LF PE ++ + I
Sbjct: 491 ALFELEPENPATYITLSNI 509
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 40/212 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I+ K G +A+ +FD D + M++GY++ G I ARKLFD M +
Sbjct: 92 NSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCV 151
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVN--------------------- 146
+TTM+ G+++ G +EA ++F + V T+VN
Sbjct: 152 SYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLV 211
Query: 147 -----------------GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
Y + + EA RLF EMPER V+WN+M+ GY + G +++A
Sbjct: 212 VKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEAR 271
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
+LF + +++V+SW T+I ++ GR+ +A
Sbjct: 272 ELFDGI--CDKDVISWGTMIDGYIQKGRLREA 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 41/210 (19%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----- 101
CN +S + G+ D+ARK+FD MP + + TMI G+++ G +EA ++F M
Sbjct: 122 CNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGV 181
Query: 102 AERDTRLW----------------------------------TTMLNGYIECGMIKEARK 127
D L T +++ Y C ++EAR+
Sbjct: 182 VPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARR 241
Query: 128 LFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
LFD E+++ TW+ M+NGY K ++EA LF + ++ +SW M+ GY Q G++ +
Sbjct: 242 LFD-EMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLRE 300
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
AL+++R M + + I+ + CGR
Sbjct: 301 ALEIYRAMLQTGHG-PNEVMIVNLVSACGR 329
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 42/196 (21%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
LC R AR++FD+MPER++ W+ M+NGY K G++ EAR+LFD + ++D W TM+
Sbjct: 232 LCSGVR--EARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMI 289
Query: 114 NGYIECGMIKEARKLF-------DGPD-------------AEKSVSTW---STMVN-GYV 149
+GYI+ G ++EA +++ GP+ V W T+V G+
Sbjct: 290 DGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFD 349
Query: 150 KINQIEEAERLFYEMPERKDV--------------SWNIMMGGYGQNGQIEKALDLFRRM 195
N I+ FY D+ SWN + G+ +NG ++ AL F +M
Sbjct: 350 CYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKM 409
Query: 196 PEPERNVVSWNTIIKA 211
R+V SW+T+I
Sbjct: 410 --HVRDVFSWSTMISG 423
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 40/200 (20%)
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST 140
+++ Y C ++EAR+LFD+M ER+ W MLNGY + G++ EAR+LFDG +K V +
Sbjct: 226 LMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGI-CDKDVIS 284
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMM--------------GGYGQNGQIE 186
W TM++GY++ ++ EA ++ M + +M+ G+ +G +
Sbjct: 285 WGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVV 344
Query: 187 K-ALDLFRRMPEP----------------------ERNVVSWNTIIKALVRCGRIEDAQW 223
K D + + + ++ SWN + ++ G ++ A
Sbjct: 345 KRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALK 404
Query: 224 HFNQMQERERDVSSWTTIVD 243
F++M RDV SW+T++
Sbjct: 405 TFDKMH--VRDVFSWSTMIS 422
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 110/271 (40%), Gaps = 77/271 (28%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE---- 103
N ++ K G D AR++FD + ++D+ W TMI+GYI+ G ++EA +++ M +
Sbjct: 255 NVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHG 314
Query: 104 --------------RDTRL---W------------------TTMLNGYIECGMIKEARKL 128
R T + W TT++ Y CGM+ A
Sbjct: 315 PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQ 374
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
F+ + + +W+ + G++K ++ A + F +M R SW+ M+ GY Q+ + A
Sbjct: 375 FE-VGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMA 433
Query: 189 LDLFRRMPEP-----ERNVVSWNTIIKAL------------------------------- 212
L+LF +M E +VS + I L
Sbjct: 434 LELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDM 493
Query: 213 -VRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+CG I A FNQ+++ VS W I+
Sbjct: 494 YAKCGSINSALQFFNQIRDEVSSVSPWNAII 524
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+T + +++N Y +CG IK A+ LFDG SVS + MV+GYV+ QI+ A +LF M
Sbjct: 87 NTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSC-NIMVSGYVRNGQIDNARKLFDVM 145
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
P + VS+ M+ G+ QNG +AL++F+ M
Sbjct: 146 PNKGCVSYTTMIMGFVQNGFFREALEVFKDM 176
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 7/179 (3%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G D A F+ + + W+ + G+IK GM+ A K FD+M RD W+TM++GY
Sbjct: 366 GMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYA 425
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE--RLFYEMPERKDVSWN-- 173
+ K A +LF A TMV+ + I + + +L +E + + +N
Sbjct: 426 QSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDN 485
Query: 174 ---IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
++ Y + G I AL F ++ + +V WN II L G F+ MQ
Sbjct: 486 LRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQ 544
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 46 RCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM---- 101
R S I L + GR HARK+FD+MPERD W+ M+ Y + G+ ++ LFD M
Sbjct: 7 RATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRIS 66
Query: 102 -AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEA 157
++ D ++ +N I+ KL + S+ + +++ Y K +A
Sbjct: 67 DSKPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDA 126
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
++F EM +V+W ++ Y + + A ++FR MPE ++WN II A RCG
Sbjct: 127 RKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVE--IAWNIIIAAHARCGE 184
Query: 218 IEDAQWHFNQMQERERDVSSWT 239
+E F +M E WT
Sbjct: 185 VEACLHLFKEMCENLYQPDQWT 206
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 59 RTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLN 114
R D A ++F MPE+ W+ +I + +CG ++ LF +M E D ++ +++
Sbjct: 153 RFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMS 212
Query: 115 GYIEC-----GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
E G + + G V+ +++V+ Y K+ +A ++F
Sbjct: 213 ACTESMESLHGCMMHCFVIKSGWSTAMEVN--NSIVSFYAKLECHGDAVKVFNSGGAFNQ 270
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
VSWN ++ + + G +KAL F++ PE+N+VSW ++I R G + A F M+
Sbjct: 271 VSWNAIIDAHMKVGDTQKALLAFQQ--APEKNIVSWTSMIVGYTRNGNGDLALSLFLDMK 328
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I K G T A F Q PE+++ W +MI GY + G A LF M +R++
Sbjct: 274 NAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDM-KRNSF 332
Query: 108 LWTTMLNGYI--ECGMI------KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
++ G + C + K +K + ++++N Y K IE ++
Sbjct: 333 QLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKL 392
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
+ ++ VSWN M+ +G NG+ +A+ +FR M + V++ ++ G
Sbjct: 393 ALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGL 452
Query: 218 IEDAQWHFNQMQ 229
I++ F M
Sbjct: 453 IDEGFAFFQSMS 464
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 8/210 (3%)
Query: 13 MHAHKLNTHPLIHGYPFLRTR-LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
+H+H N L+H LR+ + S++S ++ +K C + G+T H V+
Sbjct: 54 VHSHSSN-QALLHYIHMLRSSVIPSSYSFSSLIKACTLLTDAV--NGKTLHGH-VWKYGF 109
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
+ + + T++ Y G + +ARK+FD+M+ RD WTTM++ Y+ ++ A LF
Sbjct: 110 DSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVE 169
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDL 191
K+ +TW+ +++GY K+ IE E F E+P + +SW +M Y +N + + + L
Sbjct: 170 MPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKL 229
Query: 192 FRRMPEPERNV---VSWNTIIKALVRCGRI 218
F M + V V+ T+I A G +
Sbjct: 230 FHEMVNEGKVVPDEVAITTVISACAHLGAL 259
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ + ++I+ Y KCG ++ + +F ++ E++ W +M++G G KEA ++F +
Sbjct: 277 DVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEME 336
Query: 134 AEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQI 185
E + T+ +++ I+E R F M E +S + M+ + G +
Sbjct: 337 REGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLL 396
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKA 211
E AL++ R M E N W ++
Sbjct: 397 EDALEMIRGM-RFEPNSFIWGALLNG 421
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 10/190 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S I+ + G ARK+F++MPERD+ W+ MI GY+K G ++ AR LFD+ +D
Sbjct: 178 SSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVV 237
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVN-GYVKINQIEEAER 159
W M+ GY+ CG+ K+A +LF+ PD +S S + G ++ + A+
Sbjct: 238 SWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKV 297
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+ M + + N ++ Y + G I+++LD+F + +++V+SWN++I + G +
Sbjct: 298 MEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSI--TDKDVISWNSVIVGMALHGHGK 355
Query: 220 DAQWHFNQMQ 229
++ F MQ
Sbjct: 356 ESLSLFKMMQ 365
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 17/232 (7%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
+NT +HG + RL F N ++ N+ + K G + A +FD + D+
Sbjct: 124 VNTGSAVHG---MVLRLG--FGSNAVVR--NTLLVFHAKCGDLNVATSLFDDSCKGDVVA 176
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS 137
W ++I GY + G +K ARKLF++M ERD W M+ GY++ G ++ AR LFD K
Sbjct: 177 WSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPV-KD 235
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFR 193
V +W+ M+ GYV ++A LF EM +V+ ++ G +E +
Sbjct: 236 VVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHA 295
Query: 194 RMPEPERNVVS---WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ E +S N +I +CG I+++ F + ++DV SW +++
Sbjct: 296 KVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSIT--DKDVISWNSVI 345
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 55/269 (20%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
L+TH HG F++N M + I K G+ D+AR VFDQM R++
Sbjct: 112 LHTHAFKHG-----------FAMNDVMVG-TALIDMYAKCGKLDYARLVFDQMGVRNLVS 159
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG------ 131
W+TMI+GY+K G + +A KLFD++ ++ WT ++ G+++ +EA + F
Sbjct: 160 WNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGV 219
Query: 132 -PD-------------------------------AEKSVSTWSTMVNGYVKINQIEEAER 159
PD +V +++++ Y + IE A +
Sbjct: 220 VPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
+F M +R VSWN ++ G+ NG +KAL FR M + E N VS+ + + A G
Sbjct: 280 VFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGL 339
Query: 218 IEDAQWHFNQMQERERD---VSSWTTIVD 243
I++ F ++ R+ + + +VD
Sbjct: 340 IDEGLKIFADIKRDHRNSPRIEHYGCLVD 368
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 40/204 (19%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
ARKVFD+M R++ W+ MI+GY+K GM+K+AR +F +M E+D W M+ GY CG
Sbjct: 100 ARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRF 159
Query: 123 KEA-------RKLFDGPDAEKSVSTWSTMV------------------------------ 145
EA R++ G + S V
Sbjct: 160 SEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSI 219
Query: 146 -NGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS 204
+ Y K ++E+A RLF +M R +W ++ GY G ++ A ++F +M P++N S
Sbjct: 220 VDAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQM--PKKNTYS 277
Query: 205 WNTIIKALVRCGRIEDAQWHFNQM 228
W +I R G A F +M
Sbjct: 278 WTALIGGYARNGMAHKALGVFRKM 301
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 48/247 (19%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
S+ L T ++RC+ ++ KEG+ H + + +I+ Y CG AR
Sbjct: 44 SSHILATLLRRCSD--TKSYKEGKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYVRAR 101
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
K+FD+M R+ W M++GY++ GM+K+AR +F EK +W+ MV GY +
Sbjct: 102 KVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFY-KMPEKDCVSWNAMVVGYAHCGRFS 160
Query: 156 EAERLFYEMPERKDVSWN---------------------------IMMG----------- 177
EA R FY R V +N +++G
Sbjct: 161 EALR-FYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSI 219
Query: 178 --GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV 235
Y + G++E A+ LF M R++ +W T++ CG ++ A F+QM +++
Sbjct: 220 VDAYAKCGKMEDAMRLFDDM--TVRDIPAWTTLVSGYALCGDMDSAAEMFSQMP--KKNT 275
Query: 236 SSWTTIV 242
SWT ++
Sbjct: 276 YSWTALI 282
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G+ + A ++FD M RD+ W T+++GY CG + A ++F QM +++T WT ++ G
Sbjct: 225 KCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGG 284
Query: 116 YIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM---- 164
Y GM +A +F PD T+S+ + I ++ +++ +
Sbjct: 285 YARNGMAHKALGVFRKMIMHRVRPDE----FTFSSCLFACATIASLKHGKQIHAFLLRNN 340
Query: 165 --PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
P VS + M Y + G +E A +F E ++VV WNT+I AL G ++A
Sbjct: 341 IRPNPVVVSAVVDM--YAKCGSMETARRIF-NFTEHMQDVVLWNTMISALAHYGYGKEAV 397
Query: 223 WHFNQM 228
N M
Sbjct: 398 LMLNDM 403
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 27/213 (12%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYI-KCGMIKEARKLFDQMA--ERDTRLWTT 111
K G+ +ARK+FD+MPER ++ MI+GYI K A +L+ ++ RD
Sbjct: 17 AKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEELYREVPCEFRDPVCSNA 76
Query: 112 MLNGYIECGMIKEARKLFDG-PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
++NGY++ G EA ++F+ ++++ V +WS +V G + +I A +LF MPER V
Sbjct: 77 LMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERNVV 136
Query: 171 SWNIMMGGYGQNGQIEKALDLF---RRMPEPERNVVSWNTIIKALVRCGRIEDA-QWH-- 224
SW+ M+ GY + G E F RR E N + +IK CG ++D Q H
Sbjct: 137 SWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGL 196
Query: 225 ---------------FNQMQERERDVSSWTTIV 242
F +M E+D+ SWT ++
Sbjct: 197 VSRLGFEFVDAAYEVFERMP--EKDLISWTAMI 227
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 17/183 (9%)
Query: 70 MPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF 129
M ++++ W M+ Y K G I ARKLFD+M ER T + M++GY I +ARK
Sbjct: 1 MSQKNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGY-----ILKARKFH 55
Query: 130 DGPDAEKSVS-------TWSTMVNGYVKINQIEEAERLFYEMPE--RKDVSWNIMMGGYG 180
+ + V + ++NGY+KI + EA R+F + E R VSW+ ++ G
Sbjct: 56 LAEELYREVPCEFRDPVCSNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLC 115
Query: 181 QNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM-QERERDVSSWT 239
++G+I A LF RM PERNVVSW+ +I + G E+ F +M +E +V+S T
Sbjct: 116 RDGRIGYARKLFDRM--PERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTT 173
Query: 240 TIV 242
+
Sbjct: 174 MTI 176
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 44/243 (18%)
Query: 46 RCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
+ + +SRL E D A +VF++MPE+D+ W MI ++ G + + +LFD + E+D
Sbjct: 192 QIHGLVSRLGFE-FVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKD 250
Query: 106 TRLWTTMLNGYIE--------CGMIKEARK---------------------LFDGP---- 132
+WT +++G++ C ++ R+ L +G
Sbjct: 251 DFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIHS 310
Query: 133 -----DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
+ E +S +++++ Y K + +A ++F ++ E VS N ++ G+ QNG E+
Sbjct: 311 HVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEE 370
Query: 188 ALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIV 242
AL++++RM E N V++ ++ A G IE+ + F+ M+ R R D + +V
Sbjct: 371 ALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKSRYRNEPDADHYACMV 430
Query: 243 DCL 245
D L
Sbjct: 431 DLL 433
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 22/170 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-----A 102
++ + LC++GR +ARK+FD+MPER++ W MI+GY++ G+ + F +M
Sbjct: 108 SAVVVGLCRDGRIGYARKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVV 167
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKL--------FDGPDA---------EKSVSTWSTMV 145
E ++ T M+ G CG +K+ ++ F+ DA EK + +W+ M+
Sbjct: 168 EVNSTTMTIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMI 227
Query: 146 NGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+V ++ + LF + E+ D W +++ G+ N + E+AL + RM
Sbjct: 228 RRFVTDGRMGKPVELFDTLKEKDDFVWTVLISGFVSNEEYEEALCWYVRM 277
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 22/218 (10%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
+HGY +R R+ LN+ S + K G+ + A +F MP+ W+ MI
Sbjct: 329 FVHGY-IIRNRIQPDIFLNS------SLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMI 381
Query: 83 NGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+GY+ G + +A +LF +M+ E D +T++L + +++ R++ + E+++
Sbjct: 382 SGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHN-LIVERNL 440
Query: 139 S----TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+++ Y K +EEA +F +PER VSW M+ YG +G++ +AL+LF
Sbjct: 441 GNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAE 500
Query: 195 MPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
M + P+R V++ I+ A G ++D +HFNQM
Sbjct: 501 MLQSNVKPDR--VTFLAILSACSHAGLVDDGLYHFNQM 536
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 57/249 (22%)
Query: 46 RCNSFISRLC-----KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
R +SF+S K G+ + A +VF+QMP + + W++MINGY G +LF +
Sbjct: 239 RMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKR 298
Query: 101 MAERDTR-LWTTMLNGYIECGMIKEARKLFDGPDA---------EKSVSTWSTMVNGYVK 150
M + TT+ + + C ++ +L +G + + S++++ Y K
Sbjct: 299 MYSEGVKPTLTTLTSTLMAC---SQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFK 355
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EP-------- 198
++E AE +F MP+ VSWN+M+ GY G++ AL LF M EP
Sbjct: 356 CGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSV 415
Query: 199 ---------------------ERNVVSWNTIIKALV----RCGRIEDAQWHFNQMQERER 233
ERN+ + ++ AL+ +CG +E+A F + ER
Sbjct: 416 LAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP--ER 473
Query: 234 DVSSWTTIV 242
D+ SWT+++
Sbjct: 474 DLVSWTSMI 482
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 31/235 (13%)
Query: 2 AKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD 61
A+KL PL +++ L ++H + T L ++ C + IS D
Sbjct: 3 ARKLIPLLRASVNSKSLKQGKVLH-------QKVVTLGLQNDVYVCKNLISLYVSCNLFD 55
Query: 62 HARKVFDQMPER-DMRLWDTMINGYIKCGMIKEARKLFDQM-----AERDTRLWTTMLNG 115
+A+ VFD + ++ L + ++ GY + M EA LFD++ + D+ + ++L
Sbjct: 56 YAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKA 115
Query: 116 YIECGMIKEA------RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
CG ++ + S++V Y K N+ E A +LF EMP++
Sbjct: 116 ---CGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDV 172
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIED 220
WN ++ Y Q+G+ E+AL F M EP+ TI A+ C R+ D
Sbjct: 173 ACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDS-----VTITTAISSCARLLD 222
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 52 SRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-DTRLWT 110
S+ K+G+ H +KV + D+ + +I+ Y+ C + A+ +FD + + L
Sbjct: 16 SKSLKQGKVLH-QKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCN 74
Query: 111 TMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAER----LFY 162
++ GY M EA LFD P + T+ +++ + ++ + L
Sbjct: 75 GLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVK 134
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
E V + ++G Y + + E A+ LF MP+ ++V WNT+I + G+ E+A
Sbjct: 135 EGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPD--KDVACWNTVISCYYQSGKFEEAL 192
Query: 223 WHFNQMQE--RERDVSSWTTIV 242
+F M+ E D + TT +
Sbjct: 193 RYFGMMRRFGFEPDSVTITTAI 214
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 22/218 (10%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
+HGY +R R+ LN+ S + K G+ + A +F MP+ W+ MI
Sbjct: 329 FVHGY-IIRNRIQPDIFLNS------SLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMI 381
Query: 83 NGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+GY+ G + +A +LF +M+ E D +T++L + +++ R++ + E+++
Sbjct: 382 SGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHN-LIVERNL 440
Query: 139 S----TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+++ Y K +EEA +F +PER VSW M+ YG +G++ +AL+LF
Sbjct: 441 GNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAE 500
Query: 195 MPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
M + P+R V++ I+ A G ++D +HFNQM
Sbjct: 501 MLQSNVKPDR--VTFLAILSACSHAGLVDDGLYHFNQM 536
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 57/249 (22%)
Query: 46 RCNSFISRLC-----KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
R +SF+S K G+ + A +VF+QMP + + W++MINGY G +LF +
Sbjct: 239 RMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKR 298
Query: 101 MAERDTR-LWTTMLNGYIECGMIKEARKLFDGPDA---------EKSVSTWSTMVNGYVK 150
M + TT+ + + C ++ +L +G + + S++++ Y K
Sbjct: 299 MYSEGVKPTLTTLTSTLMAC---SQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFK 355
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EP-------- 198
++E AE +F MP+ VSWN+M+ GY G++ AL LF M EP
Sbjct: 356 CGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSV 415
Query: 199 ---------------------ERNVVSWNTIIKALV----RCGRIEDAQWHFNQMQERER 233
ERN+ + ++ AL+ +CG +E+A F + ER
Sbjct: 416 LAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP--ER 473
Query: 234 DVSSWTTIV 242
D+ SWT+++
Sbjct: 474 DLVSWTSMI 482
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 31/235 (13%)
Query: 2 AKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD 61
A+KL PL +++ L ++H + T L ++ C + IS D
Sbjct: 3 ARKLIPLLRASVNSKSLKQGKVLH-------QKVVTLGLQNDVYVCKNLISLYVSCNLFD 55
Query: 62 HARKVFDQMPER-DMRLWDTMINGYIKCGMIKEARKLFDQM-----AERDTRLWTTMLNG 115
+A+ VFD + ++ L + ++ GY + M EA LFD++ + D+ + ++L
Sbjct: 56 YAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKA 115
Query: 116 YIECGMIKEA------RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
CG ++ + S++V Y K N+ E A +LF EMP++
Sbjct: 116 ---CGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDV 172
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIED 220
WN ++ Y Q+G+ E+AL F M EP+ TI A+ C R+ D
Sbjct: 173 ACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDS-----VTITTAISSCARLLD 222
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 52 SRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-DTRLWT 110
S+ K+G+ H +KV + D+ + +I+ Y+ C + A+ +FD + + L
Sbjct: 16 SKSLKQGKVLH-QKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCN 74
Query: 111 TMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAER----LFY 162
++ GY M EA LFD P + T+ +++ + ++ + L
Sbjct: 75 GLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVK 134
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
E V + ++G Y + + E A+ LF MP+ ++V WNT+I + G+ E+A
Sbjct: 135 EGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPD--KDVACWNTVISCYYQSGKFEEAL 192
Query: 223 WHFNQMQE--RERDVSSWTTIV 242
+F M+ E D + TT +
Sbjct: 193 RYFGMMRRFGFEPDSVTITTAI 214
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 37/215 (17%)
Query: 14 HAHKLNTHPLIHGYP---FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
+A L++H + G+ F+ + S +S +C+S I AR +FD+M
Sbjct: 21 NAKSLHSHIIKSGFCNHIFILNNMISVYS------KCSSIID----------ARNMFDEM 64
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR-----LWTTMLNGYIECGMIKEA 125
P R++ W TM++ M EA L+++M E L++ +L CG+++
Sbjct: 65 PHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKA---CGLVRNV 121
Query: 126 R-------KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
+F + + + +++ YVK + +A+R+F E+P + SWN ++ G
Sbjct: 122 ELGKMVHYHIFQAK-LDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILG 180
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALV 213
Y + G I+ A+ LF +MPEP+ +VSWN+II LV
Sbjct: 181 YAKQGLIDDAMKLFDKMPEPD--IVSWNSIIAGLV 213
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
+K S S + K G +H + + + MI+ Y KC I +AR +FD+M
Sbjct: 18 SIKNAKSLHSHIIKSGFCNH------------IFILNNMISVYSKCSSIIDARNMFDEMP 65
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK----SVSTWSTMVNGYVKINQIEEAE 158
R+ WTTM++ M EA L++ K + +S ++ + +E +
Sbjct: 66 HRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGK 125
Query: 159 RLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
+ Y + + K V N ++ Y + G + A +F +P +N SWNT+I +
Sbjct: 126 MVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPC--KNATSWNTLILGYAK 183
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIV 242
G I+DA F++M E D+ SW +I+
Sbjct: 184 QGLIDDAMKLFDKMP--EPDIVSWNSII 209
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 110/230 (47%), Gaps = 20/230 (8%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
I M+ L+ +HG+ + S + L+ + + I K+G ++A ++F+++
Sbjct: 351 ICMNFDNLSLASQVHGFV-----ITSGYELDCVVG--SILIDIYAKQGSINNALRLFERL 403
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEAR 126
P++D+ W ++I G + G K A LF M + D + + +L + +
Sbjct: 404 PDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGK 463
Query: 127 KLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
++ G ++E V+T +++ Y K IE+A LF + E +SW ++ G Q
Sbjct: 464 QVHSLCLKKGYESEGVVTT--ALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQ 521
Query: 182 NGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
NG+ E+A+ L +M E + N ++ ++ A G +E+A FN ++
Sbjct: 522 NGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIE 571
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 42/198 (21%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ ++ N+ + K G A++VF ++P ++ W+T+I GY K G+I +A KLFD
Sbjct: 136 LDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFD 195
Query: 100 QMAERDTRLWTTMLNGYIE-------------------------------CG------MI 122
+M E D W +++ G ++ CG +
Sbjct: 196 KMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLG 255
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMG 177
+E E S S +++ Y + EA ++F + VS WN M+
Sbjct: 256 REIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLS 315
Query: 178 GYGQNGQIEKALDLFRRM 195
G+ NG +AL + M
Sbjct: 316 GHVVNGDYVEALSMISHM 333
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 80 TMINGYIKCGMIKEARKLFDQM-----AERDTRLWTTMLNGYIECGMIKEARKLFDG--- 131
+I+ Y C ++ EA K+FDQ LW +ML+G++ G EA +
Sbjct: 276 ALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHR 335
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAER----LFYEMPERKDVSWNIMMGGYGQNGQIEK 187
T+S ++ + + + A + + E V +I++ Y + G I
Sbjct: 336 SGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINN 395
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCG 216
AL LF R+ P+++VV+W+++I R G
Sbjct: 396 ALRLFERL--PDKDVVAWSSLITGCARFG 422
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 21/189 (11%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECG 120
D AR VFD +RD+ W+TMI Y+ G + +A+ LFD+M ERD W+T++ GY++ G
Sbjct: 2 DDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVG 61
Query: 121 MIKEARKLFDG-------PDAEKSVST---------WSTMVNGYVKINQIEEAERLFYEM 164
E + F P+ VS +++++ Y K +I+ A +F+E
Sbjct: 62 CFMEDLEFFHNMLQSEVKPNEYTMVSALAIKMNDRLLASLIDMYAKCGEIDSASSVFHEH 121
Query: 165 PERKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIED 220
++ V WN M+GG+ +G+ E+A+ LF +M + ER N V++ ++ A I++
Sbjct: 122 KVKRKVWPWNAMIGGFAMHGKPEEAISLFEQM-KVERVSPNKVTFIALLNACSHGYMIKE 180
Query: 221 AQWHFNQMQ 229
+ +F M
Sbjct: 181 GKSYFELMS 189
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALV 213
+++A +F +R SWN M+G Y +G + +A +LF M ER+VVSW+TII V
Sbjct: 1 MDDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEM--HERDVVSWSTIIAGYV 58
Query: 214 RCG-RIEDAQWHFNQMQ 229
+ G +ED ++ N +Q
Sbjct: 59 QVGCFMEDLEFFHNMLQ 75
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 41/235 (17%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A L+ + N+ I K GR + AR VFD +RD W+TMI Y+ G + A
Sbjct: 137 AVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLA 196
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVST------- 140
++LFD+M ERD W+T++ GY++ G EA F P+ VS
Sbjct: 197 KELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNL 256
Query: 141 -------W-----------------STMVNGYVKINQIEEAERLFYEMPERKDV-SWNIM 175
W +++++ Y K +I+ A +F+E ++ V WN M
Sbjct: 257 VALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAM 316
Query: 176 MGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+GG+ +G+ E+A+++F +M + N V++ ++ A +++ + +F M
Sbjct: 317 IGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELM 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 12/203 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC-----GMIKEARKLFDQMA 102
N F+ + T +A K+FDQ+P+ D+ +++TMI + I R L
Sbjct: 48 NKFLKNVALASLT-YAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSG 106
Query: 103 ERDTRLWTTMLNGYIECGM-IKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAE 158
R G GM ++E ++F + +V + ++ + K ++E+A
Sbjct: 107 YFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDAR 166
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
+F +R SWN M+G Y +G + A +LF M E R+VVSW+TII V+ G
Sbjct: 167 NVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHE--RDVVSWSTIIAGYVQVGCF 224
Query: 219 EDAQWHFNQMQERERDVSSWTTI 241
+A F++M + E + +T +
Sbjct: 225 MEALDFFHKMLQSEVKPNEYTMV 247
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I G A KVF+ M +++ W++M++GY KCG + A+K+F+ M ERD R
Sbjct: 153 NSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVR 212
Query: 108 LWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEA----E 158
W++ ++GY++ G +EA +F+ GP A + T ++++ + +++ +
Sbjct: 213 SWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANE--VTMVSVLSACAHLGALQKGRMMHQ 270
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
+ + V ++ Y + G IE+AL +FR + + + +V WN +I L G +
Sbjct: 271 YIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLV 330
Query: 219 EDAQWHFNQMQ 229
E++ F +MQ
Sbjct: 331 EESLKLFKEMQ 341
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G + HA ++ E D + +++I+ Y CG I A K+F+ M ++ W +ML+G
Sbjct: 131 KSGVSVHA-QIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDG 189
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM----PERKDVS 171
Y +CG + A+K+F+ E+ V +WS+ ++GYVK + EA +F +M P+ +V+
Sbjct: 190 YAKCGEMAMAQKVFESMQ-ERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
++ G ++K + + + + +V +++ +CG IE+A + F +
Sbjct: 249 MVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGIS 308
Query: 230 ERERDVSSWTTIVDCL 245
+ + DV W ++ L
Sbjct: 309 KSQTDVFIWNAMIGGL 324
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 120/223 (53%), Gaps = 19/223 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N + N + CKEG+ + A+ V M + D++ ++++++GY + +A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325
Query: 95 RKLFDQMAE----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +FD MA + +++TTM+NG+ + M+ EA LF+ K +V T+S++++G
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K+ +I A +L EM +R V+++ ++ +N ++KA+ L + + +
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ ++ +IK L + GR+EDAQ F + + DV ++T ++
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMI 488
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 115/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS + ++A +F++M + ++ ++ +++G+ K G + +A+ + M +
Sbjct: 240 NALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMK 299
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEE 156
D + + ++++GY + +A+ +FD + +V ++TMVNG+ KI ++E
Sbjct: 300 DDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDE 359
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A LF EM RK V+++ ++ G + G+I AL L M + + N+V++++I+
Sbjct: 360 AINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILD 419
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
AL + ++ A ++++ D+ ++T ++ L
Sbjct: 420 ALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGL 456
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLF----D 99
N+ I LC +G A D++ + L + T+ING K G I A +L
Sbjct: 135 NTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDG 194
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
++ + + ++ +++ + ++ +A L+ A++ V T++ +++G+ ++++
Sbjct: 195 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY 254
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
A LF +M + ++NI++ G+ + G++ A + M + + +VV++N+++
Sbjct: 255 AIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMD 314
Query: 211 ALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
++ A+ F+ M +V +TT+V+
Sbjct: 315 GYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 120/223 (53%), Gaps = 19/223 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N + N + CKEG+ + A+ V M + D++ ++++++GY + +A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325
Query: 95 RKLFDQMAE----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +FD MA + +++TTM+NG+ + M+ EA LF+ K +V T+S++++G
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K+ +I A +L EM +R V+++ ++ +N ++KA+ L + + +
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ ++ +IK L + GR+EDAQ F + + DV ++T ++
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMI 488
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 115/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS + ++A +F++M + ++ ++ +++G+ K G + +A+ + M +
Sbjct: 240 NALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMK 299
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEE 156
D + + ++++GY + +A+ +FD + +V ++TMVNG+ KI ++E
Sbjct: 300 DDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDE 359
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A LF EM RK V+++ ++ G + G+I AL L M + + N+V++++I+
Sbjct: 360 AINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILD 419
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
AL + ++ A ++++ D+ ++T ++ L
Sbjct: 420 ALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGL 456
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLF----D 99
N+ I LC +G A D++ + L + T+ING K G I A +L
Sbjct: 135 NTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDG 194
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
++ + + ++ +++ + ++ +A L+ A++ V T++ +++G+ ++++
Sbjct: 195 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY 254
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
A LF +M + ++NI++ G+ + G++ A + M + + +VV++N+++
Sbjct: 255 AIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMD 314
Query: 211 ALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
++ A+ F+ M +V +TT+V+
Sbjct: 315 GYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 13/226 (5%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIK 92
RL L++ + NS IS K R D A VFD + + W+ MI GY + G +
Sbjct: 361 RLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVN 420
Query: 93 EARKLFDQMAER----DTRLWTTMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMV 145
EA LF M + D+ + +++ + + ++A+ L + + +V + +V
Sbjct: 421 EALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALV 480
Query: 146 NGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER---NV 202
+ Y K IE A LF M ER ++WN M+ GYG +G + ALDLF M N
Sbjct: 481 DMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPND 540
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+++ ++I A G +E+ ++F M+E E + + +VD L
Sbjct: 541 ITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLL 586
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 53/264 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HGY +R S +++T + + K G + R VF +M +++ W+T+I+
Sbjct: 258 VHGYA-VRLGFDSMVNVST------ALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVID 310
Query: 84 GYIKCGMIKEARKLFDQMAERDTR-LWTTMLNGYIECGMI------KEARKLFDGPDAEK 136
G + G +EA F +M E +M+ C + K +L D
Sbjct: 311 GLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLSS 370
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM- 195
+VS +++++ Y K +++ A +F + + +V+WN M+ GY QNG + +AL+LF M
Sbjct: 371 NVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQ 430
Query: 196 -----PEP-------------------------------ERNVVSWNTIIKALVRCGRIE 219
P+ + NV ++ +CG IE
Sbjct: 431 SQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGAIE 490
Query: 220 DAQWHFNQMQERERDVSSWTTIVD 243
A+ F+ MQER V +W ++D
Sbjct: 491 TARELFDMMQERH--VITWNAMID 512
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 22 PLIHGYPFLRTRLASTFSLNTEMK---------------RCNSFISRLCKEGRTDHARKV 66
P+++ + +L F L M+ S ++ K + D A K+
Sbjct: 133 PVVYDFTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKM 192
Query: 67 FDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE----RDTRLWTTMLNGYIECGMI 122
F +MPERD+ W+T++ GY + G ++A KL M E D+ ++L + +
Sbjct: 193 FVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGL 252
Query: 123 KEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMG 177
+ R + G D+ +VST +++ Y K ++E +F M + VSWN ++
Sbjct: 253 RIGRSVHGYAVRLGFDSMVNVST--ALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVID 310
Query: 178 GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
G QNG+ E+A F +M E E+ + +++ AL C + D +
Sbjct: 311 GLAQNGESEEAFATFLKMFE-EKVEPTNVSMMGALHACSNLGDLE 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 50/242 (20%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK----CGMIKEARKLFDQMAERD 105
IS CK G + A +VFD + + L+ T++ GY+K + +++ + E
Sbjct: 75 LISLFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPV 134
Query: 106 TRLWTTML-----NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+T +L N ++ GM E + E ++ +++VN Y K +I++A ++
Sbjct: 135 VYDFTYLLQLCGENFDLKKGM--EVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKM 192
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTI--------IKAL 212
F MPER V WN ++ GY QNG KAL L M E + S + +K L
Sbjct: 193 FVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGL 252
Query: 213 -----------------------------VRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+CG +E + F +M ++V SW T++D
Sbjct: 253 RIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMS--SKNVVSWNTVID 310
Query: 244 CL 245
L
Sbjct: 311 GL 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-- 129
E ++ +++N Y KC I +A K+F +M ERD W T++ GY + G ++A KL
Sbjct: 167 ESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLD 226
Query: 130 ---DGPDAEKSVSTWSTM-----VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
DG A+ S++ S + V G ++I + + +VS ++ Y +
Sbjct: 227 MQEDGKKAD-SITLVSVLPAVADVKG-LRIGRSVHGYAVRLGFDSMVNVS-TALLDMYFK 283
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
G++E +F+RM +NVVSWNT+I L + G E+A F +M E +
Sbjct: 284 CGEVETGRLVFQRMSS--KNVVSWNTVIDGLAQNGESEEAFATFLKMFEEK 332
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 33/150 (22%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS 139
+++ Y KCG I+ AR+LFD M ER W M++GY G+ K A LFD E S+
Sbjct: 478 ALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLK 537
Query: 140 ----TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
T+ ++++ +EE L+Y + IM GYG +E ++D
Sbjct: 538 PNDITFLSVISACSHSGFVEEG--LYY---------FKIMKEGYG----LEPSMD----- 577
Query: 196 PEPERNVVSWNTIIKALVRCGRIEDAQWHF 225
+ ++ L R G+++DA W F
Sbjct: 578 --------HYGAMVDLLGRAGKLDDA-WKF 598
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 19/193 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + D AR+VFD+M +R+M W+ MI GY K G + ARKLFD M RD
Sbjct: 216 NTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVI 275
Query: 108 LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
WT+M++ Y + G +A +LF PD T +++++ I ++ E +
Sbjct: 276 SWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDE----ITVASVLSACAHIGALDVGEAV 331
Query: 161 FYEMPERKDVSWNIMMGG-----YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
+E + DV+ +I +G Y + G +EK L +F M +R+ VSW ++I L
Sbjct: 332 -HEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEM--GKRDSVSWTSVIAGLAVN 388
Query: 216 GRIEDAQWHFNQM 228
G + A F+ M
Sbjct: 389 GSADSALNLFSLM 401
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 25/241 (10%)
Query: 9 SFILMHAHKLNTHPLIHGYPFLRTRLA--STFSLNTEMKRC-------NSFISRLCKEGR 59
++ LM++ L + L YPFL A S S T R + F+S G
Sbjct: 64 NYNLMYSQALFGNNLT--YPFLLKACARISNVSCTTVHARVLKLGFDSDLFVSNALIHGY 121
Query: 60 TDH-----ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTML 113
ARKVFD+M ERD+ W+++I GY +C E +F++M D + TM+
Sbjct: 122 AGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMV 181
Query: 114 NGYIEC------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
+ C G++ + + E V +T+++ Y + + ++ A R+F M +R
Sbjct: 182 KVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDR 241
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
VSWN M+ GYG+ G + A LF M P R+V+SW ++I + + G+ A F +
Sbjct: 242 NMVSWNAMIMGYGKAGNLVAARKLFDDM--PHRDVISWTSMISSYSQAGQFGKAVRLFQE 299
Query: 228 M 228
M
Sbjct: 300 M 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E D+ L +T+I+ Y + M+ AR++FD+M +R+ W M+ GY + G + ARKLFD
Sbjct: 209 EVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDD 268
Query: 132 PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------PERKDVSWNIMMGGYGQNGQI 185
+ V +W++M++ Y + Q +A RLF EM P+ V+ + + +
Sbjct: 269 M-PHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDV 327
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
+A+ + R + ++ N +I +CG +E F +M +RD SWT+++ L
Sbjct: 328 GEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMG--KRDSVSWTSVIAGL 385
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNG--- 115
A ++F Q+P + W+ MI G+ + EA + ++ M + + + +L
Sbjct: 30 ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACAR 89
Query: 116 --YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+ C + AR L G D++ VS + +++GY ++ A ++F EM ER VSWN
Sbjct: 90 ISNVSCTTV-HARVLKLGFDSDLFVS--NALIHGYAGFCELGFARKVFDEMSERDLVSWN 146
Query: 174 IMMGGYGQNGQIEKALDLFR--RMPEPERNVVSWNTIIKALVRCGR--IEDAQWHFNQMQ 229
++ GYG+ + + L +F RM + + + V+ ++ A G + DA + +
Sbjct: 147 SLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEEN 206
Query: 230 ERERDVSSWTTIVD 243
+ E DV T++D
Sbjct: 207 KVEVDVYLGNTLID 220
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 112/207 (54%), Gaps = 17/207 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE-- 103
+ CKEG+ A+ VF M ++D++ +++++NGY + +A +F+ MA+
Sbjct: 285 LVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG 344
Query: 104 --RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAE 158
D ++ M++G+ + M+ EA KLF+ ++ V T++++++G K +I A
Sbjct: 345 VAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYAL 404
Query: 159 RLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
+L EM +R +++N ++ +N ++KA++L ++ + + +V ++N +I L
Sbjct: 405 KLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464
Query: 213 VRCGRIEDAQWHFNQMQERERDVSSWT 239
+ GR++DAQ F + ++ +T
Sbjct: 465 CKSGRLKDAQKVFEDVLVNGYNIDVYT 491
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 117/217 (53%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I +CK+ + A + +M + + ++T+I G G +K+A L +M
Sbjct: 213 NTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMIL 272
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ ++ +++ + + G +KEA+ +F D + ++ T+++++NGY +N++ +
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNK 332
Query: 157 AERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
AE +F M + DV S++IM+ G+ + +++A+ LF M + +VV++N++I
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
L + GRI A +M +R + ++ ++ +++D L
Sbjct: 393 GLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDAL 429
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEA----RKLFDQ 100
+ I LC +G A D++ +L + T+ING K G K A R++ +
Sbjct: 144 TLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGK 203
Query: 101 MAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEA 157
+ D ++ T+++G + ++ +A + A++ +V T++T++ G + Q+++A
Sbjct: 204 LVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDA 263
Query: 158 ERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKA 211
L ++M +++I++ + + G++++A ++F M + + N+V++N+++
Sbjct: 264 IGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNG 323
Query: 212 LVRCGRIEDAQWHFNQMQE--RERDVSSWTTIVD 243
+ A+ FN M + DV S++ ++
Sbjct: 324 YCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMIS 357
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+ ++ N+ I CK G TD AR++FD + E+D+ W+TMI GY + +EA LF
Sbjct: 293 GFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALF 352
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDA--------EKSVSTWSTMVNGYVK 150
+ M + + G + A L A + S W+++++ Y K
Sbjct: 353 EVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAK 412
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP---ERNVVSWNT 207
IE AER+F M R SWN M+ G+ +G E+AL LF M + +++
Sbjct: 413 CGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVG 472
Query: 208 IIKALVRCGRIEDAQWHFNQM 228
++ A + G ++ +F M
Sbjct: 473 VLSACTQAGLVDLGHQYFRSM 493
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 43/238 (18%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S I G D AR VFD+ RD + +I GY+ G + +AR+LFD++ +D
Sbjct: 171 SVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVS 230
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMV----------------------- 145
W M++GY++ G +EA F + STMV
Sbjct: 231 WNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290
Query: 146 -NG--------------YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALD 190
NG Y K + + A LF + E+ +SWN M+GGY E+AL
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350
Query: 191 LFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQW---HFNQMQERERDVSSWTTIVD 243
LF M + N V++ I+ A G ++ +W + ++ + S WT+++D
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLID 408
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 68/292 (23%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRC---------------NSFISRLCKE 57
+HAH L +H P + T + ++ EM + I+ +
Sbjct: 153 LHAHALKL--ALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQ 210
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT----------- 106
G D AR++FD++P +D+ W+ MI+GY++ G +EA F +M E +
Sbjct: 211 GCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVL 270
Query: 107 ----------------------------RLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+L +++ Y +CG AR+LFDG + EK V
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE-EKDV 329
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN-IMMGGYGQNGQIEKALDLFR---- 193
+W+TM+ GY ++ EEA LF E+ R +V N + G ALDL +
Sbjct: 330 ISWNTMIGGYSYLSLYEEALALF-EVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHA 388
Query: 194 ---RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ N W ++I +CG IE A+ F M R+++SW ++
Sbjct: 389 YIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH--SRNLASWNAML 438
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 48/234 (20%)
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY 116
+GR HA+ + D+ + + +++ Y +CG ++EA FDQ+ +D W ++++G+
Sbjct: 605 QGRQIHAQSCLSGYSD-DLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGF 663
Query: 117 IECGMIKEARKLF----------------------------------------DGPDAEK 136
+ G +EA +F G D+E
Sbjct: 664 AQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSET 723
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
VS + ++ Y K I++AER F+EMP++ ++SWN M+ GY Q+G +AL LF M
Sbjct: 724 EVS--NALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMK 781
Query: 197 EPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV---SSWTTIVDCL 245
+ + N V++ ++ A G +++ +F M E V + +VD L
Sbjct: 782 QLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLL 835
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 56/257 (21%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L + F N + + I K G+ DHA K+F ++ E D+ W MI GY + E
Sbjct: 513 LKTGFQFNVYVS--SVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTE 570
Query: 94 ARKLF----DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWS------- 142
A LF DQ + D + + ++ + + R++ A+ +S +S
Sbjct: 571 ALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI----HAQSCLSGYSDDLSIGN 626
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
+V+ Y + ++ EA F ++ + +VSWN ++ G+ Q+G E+AL++F +M + +
Sbjct: 627 ALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEI 686
Query: 203 VSW-------------------------------------NTIIKALVRCGRIEDAQWHF 225
S+ N +I +CG I+DA+ HF
Sbjct: 687 NSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHF 746
Query: 226 NQMQERERDVSSWTTIV 242
+M ++ SW +++
Sbjct: 747 FEMPDKNE--ISWNSMI 761
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CN I K G A+KVF+ + RD W MI+G + G +EA LF QM
Sbjct: 221 CNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGI 280
Query: 107 ----RLWTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+++++L+ + E G L G +E V + +V Y + + A
Sbjct: 281 CPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVC--NALVTLYSRSGNLSSA 338
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALV 213
E++F+ M +R VS+N ++ G Q G I +AL LF++M +P+ V+ +++ A
Sbjct: 339 EQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPD--CVTVASLLSACA 396
Query: 214 RCGRIEDA-QWH 224
G + + Q+H
Sbjct: 397 SVGALPNGKQFH 408
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
++E CN+ ++ + G A ++F M +RD ++++I+G + G I A LF
Sbjct: 315 FSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFK 374
Query: 100 QM----AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNG-----YVK 150
+M + D ++L+ G + ++ A K+ T +V G YVK
Sbjct: 375 KMNLDCQKPDCVTVASLLSACASVGALPNGKQFH--SYAIKAGMTSDIVVEGSLLDLYVK 432
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ I+ A F V WN+M+ GYGQ + K+ +F +M
Sbjct: 433 CSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQM 477
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 8/161 (4%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM- 101
E+ C I G + A VFD+MP R + W+ + N +I ++ LF +M
Sbjct: 115 EVVLCERLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRML 174
Query: 102 ---AERDTRLWTTMLNG----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI 154
E D R++ +L G + +++ E S + +++ Y K +
Sbjct: 175 TKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFL 234
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
A+++F + R VSW M+ G QNG E+A+ LF +M
Sbjct: 235 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQM 275
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 78/260 (30%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G+ H+ + M D+ + ++++ Y+KC IK A + F + LW ML GY
Sbjct: 404 GKQFHSYAIKAGMTS-DIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYG 462
Query: 118 ECGMIKEARKLFDG-------------PDAEKSVSTW----------------------- 141
+ + ++ ++F P K+ +T
Sbjct: 463 QLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVY 522
Query: 142 --STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP- 198
S +++ Y K +++ A ++F + E VSW M+ GY Q+ + +AL+LF+ M +
Sbjct: 523 VSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG 582
Query: 199 ------------------------------------ERNVVSWNTIIKALVRCGRIEDAQ 222
++ N ++ RCG++ +A
Sbjct: 583 IKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAY 642
Query: 223 WHFNQMQERERDVSSWTTIV 242
F+Q+ +D SW ++V
Sbjct: 643 AAFDQI--YAKDNVSWNSLV 660
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
++E + N+ I+ K G D A + F +MP+++ W++MI GY + G EA KLF+
Sbjct: 720 DSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFED 779
Query: 101 MAERDTR----LWTTMLNGYIECGMIKEA----RKLFDGPDAEKSVSTWSTMVNGYVKIN 152
M + D + +L+ G++ E R + + + ++ +V+ +
Sbjct: 780 MKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSG 839
Query: 153 QIEEAERLFYEMPERKDV 170
+ A+R EMP + D
Sbjct: 840 LLSRAKRFVEEMPIQPDA 857
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 58/276 (21%)
Query: 12 LMHAHKLNTHPLIHG---YPFLR------TRLASTFSLN---------TEMKRCNSFISR 53
L+ H++ H + H +PFL + LA T ++ +E+ NS +
Sbjct: 96 LLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRV 155
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
G A +FD +P RD+ W+TMI+GYIKCG ++ A K+F M E++ WT+M+
Sbjct: 156 YAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMI 215
Query: 114 NGYIECGMIKEA-----RKLFDGPDAEKSVSTWS-------------------------- 142
G++ GM KEA + L G +K + S
Sbjct: 216 VGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIK 275
Query: 143 -------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+++ YVK ++++A +F ++ ++ +W ++GG+ +G+ +ALD F +M
Sbjct: 276 IDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQM 335
Query: 196 PEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ + ++ ++ A G +E+ + F M
Sbjct: 336 QKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMS 371
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE----RDTRLWTTMLNGYI 117
+AR VFD++ + +W+TMI Y +EA L+ QM + + +L
Sbjct: 63 YARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACS 122
Query: 118 ECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
+ E ++ G +E V ++++ Y I+ A LF +P R VSW
Sbjct: 123 ALSALAETHQIHVQIIKRGFGSE--VYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSW 180
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
N M+ GY + G +E A +F+ M PE+NV+SW ++I VR G ++A QM
Sbjct: 181 NTMIDGYIKCGNVEMAYKIFQAM--PEKNVISWTSMIVGFVRTGMHKEALCLLQQM 234
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 53/249 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + K R + AR VFD+MP RD+ +M++GY K +K AR +F M ER+
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVV 351
Query: 108 LWTTMLNGYIECGMIKEARKLF-------------------------------------- 129
W ++ GY + G +EA +LF
Sbjct: 352 SWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411
Query: 130 --------DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
G D++ V +++++ Y+K +E+ +F M ER +VSWN M+ GY Q
Sbjct: 412 LKHGFWFKSGEDSDIFVG--NSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469
Query: 182 NGQIEKALDLFRRM-PEPER-NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDV---S 236
NG +AL++FR M ER + V+ ++ A G +E+ + +F M V
Sbjct: 470 NGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKD 529
Query: 237 SWTTIVDCL 245
+T +VD L
Sbjct: 530 HYTCMVDLL 538
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
+EG HAR + D+ L + +++ Y KC + EAR +FD+M RD T+M++G
Sbjct: 269 REGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSG 328
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF------------YE 163
Y + +K AR +F E++V +W+ ++ GY + + EEA RLF Y
Sbjct: 329 YAKASSVKAARLMFSNM-MERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYT 387
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQW 223
+ N+ G+ F + ++ N++I ++CG +ED +
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL 447
Query: 224 HFNQMQERERDVSSWTTIV 242
F +M ERD SW ++
Sbjct: 448 VFERM--LERDNVSWNAMI 464
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 104/271 (38%), Gaps = 78/271 (28%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + K G + ARKVFD M +R+ W+ ++ K G + EA LF M ERD
Sbjct: 58 NRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQC 117
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEK------------------------------- 136
W M++G+ + +EA + +E
Sbjct: 118 SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLI 177
Query: 137 -------SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
V S +V+ Y K + A+R F +M R VSWN ++ Y QNG KAL
Sbjct: 178 AKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKAL 237
Query: 190 DLFRRM----PEPER----------------------------------NVVSWNTIIKA 211
++F RM EP+ ++V N ++
Sbjct: 238 EVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDM 297
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+C R+ +A+ F++M RDV S T++V
Sbjct: 298 YAKCRRVNEARLVFDRMP--LRDVVSETSMV 326
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 64 RKVFDQMPERDMRLWDTMINGYIKCGMIKEAR----KLFDQMAERDTRLWTTMLNGYIEC 119
RKV + D + +++ +K + EAR ++ + + +++ Y +C
Sbjct: 8 RKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKC 67
Query: 120 GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
G +++ARK+FD +++ +W+ ++ K ++EA LF MPER SWN M+ G+
Sbjct: 68 GFLEDARKVFDHMQ-QRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGF 126
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
Q + E+AL M E V++ + AL C + D
Sbjct: 127 AQRDRFEEALRFVVDM-HSEDFVLNEYSFGSALSACAGLMD 166
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
RK+ ++ D+ + +L+ ++ + EAR + + + +V+ Y K
Sbjct: 8 RKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKC 67
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+E+A ++F M +R SWN ++G + G +++AL+LF+ M PER+ SWN ++
Sbjct: 68 GFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCM--PERDQCSWNAMVSG 125
Query: 212 LVRCGRIEDA 221
+ R E+A
Sbjct: 126 FAQRDRFEEA 135
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 118/220 (53%), Gaps = 25/220 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER-------DMRLWDTMINGYIKCGMIKEARKLFDQ 100
N+ I +CK+ H FD E+ D+ ++ +I+G+ G +K+A LF++
Sbjct: 337 NTIIDGMCKD---KHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393
Query: 101 MAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQ 153
M + D ++ +++G+ + G IKEA+ + + V T+S++++GY +N+
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453
Query: 154 IEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNT 207
+ +AE +F M R S+NIM+ G+ + +++A+ LF+ M + +V+++++
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513
Query: 208 IIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+I L + GRI A ++M R + D+ ++ +I+D L
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 116/217 (53%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS C G+ A +F++M + D+ + +++G+ K G IKEA+ + M +
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEE 156
+ D ++++++GY + +A +F+ +V +++ M+NG+ KI ++E
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
A +LF EM ++ ++++ ++ G ++G+I AL+L M + +++++N+I+
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551
Query: 211 ALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVDCL 245
AL + ++ A ++ Q D++++T +V L
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
PF+ + + CN FIS G +A KVFD+ PERD+ W +ING++K
Sbjct: 125 PFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVK 184
Query: 88 CGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--------GPDAEKS-- 137
G+ EA + F +M RL +++G+ +++ A + D G E
Sbjct: 185 NGVPGEALRCFVEM-----RLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239
Query: 138 ---VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
S + +V+ Y K E+A ++F EMP R V+W +++ G+ Q + + AL FRR
Sbjct: 240 VLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRR 299
Query: 195 M--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS--WTTIVD 243
M N + +++ A G ++ + M+ + ++++ T++VD
Sbjct: 300 MLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVD 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA-----RKLFDQMAERDTRLWT 110
K G + A KVFD+MP RD+ W ++ G+++C ++A R L D + + L T
Sbjct: 255 KCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTL-T 313
Query: 111 TMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
++L+ G + + R + + D + +++V+ Y K +++A +F + +
Sbjct: 314 SVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVK 373
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHF 225
+W M+ G +G AL++F RM E N V++ ++ A G +++ + F
Sbjct: 374 NVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLF 433
Query: 226 NQMQE 230
M+
Sbjct: 434 EMMRH 438
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 22/233 (9%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
PF+ + + CN FIS G +A KVFD+ PERD+ W +ING++K
Sbjct: 125 PFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVK 184
Query: 88 CGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--------GPDAEKS-- 137
G+ EA + F +M RL +++G+ +++ A + D G E
Sbjct: 185 NGVPGEALRCFVEM-----RLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239
Query: 138 ---VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
S + +V+ Y K E+A ++F EMP R V+W +++ G+ Q + + AL FRR
Sbjct: 240 VLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRR 299
Query: 195 M--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS--WTTIVD 243
M N + +++ A G ++ + M+ + ++++ T++VD
Sbjct: 300 MLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVD 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA-----RKLFDQMAERDTRLWT 110
K G + A KVFD+MP RD+ W ++ G+++C ++A R L D + + L T
Sbjct: 255 KCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTL-T 313
Query: 111 TMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
++L+ G + + R + + D + +++V+ Y K +++A +F + +
Sbjct: 314 SVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVK 373
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHF 225
+W M+ G +G AL++F RM E N V++ ++ A G +++ + F
Sbjct: 374 NVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLF 433
Query: 226 NQMQE 230
M+
Sbjct: 434 EMMRH 438
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG+ F + L + N ++ K DHA K+FD++ ++ + W +I+
Sbjct: 54 LHGHYFKKGSLQI-------LNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILIS 106
Query: 84 GYIKCGMIKE-ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDA-------E 135
G+ + E LF +M L+ ++C + + G A
Sbjct: 107 GFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVG 166
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
V +++++ Y+K + E AE F M E+ VSWNIM+G Y + G +EK+L++FR
Sbjct: 167 GDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF 226
Query: 196 PEPERNVVSWNTIIKALVRCG 216
P ++VVSWNTII L++CG
Sbjct: 227 --PNKDVVSWNTIIDGLIQCG 245
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 28/235 (11%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----------------LWDT 80
TF LN++ +S + K GR D A + +P +R W +
Sbjct: 294 TFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSS 353
Query: 81 MINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMI---KEARKLFDGPD 133
M++GY+ G ++ K F M D R T+++ G++ K+
Sbjct: 354 MVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIG 413
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
S++++ Y K +++A +F ++ E V W M+ G +GQ ++A+ LF
Sbjct: 414 LRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFE 473
Query: 194 RMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVD 243
M N V++ ++ A G IE+ +F M++ +V +T++V+
Sbjct: 474 GMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVN 528
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 28/183 (15%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKE-ARKLFDGPDAEKS 137
+ ++ Y+K + A KLFD++ ++T+ WT +++G+ E LF A+ +
Sbjct: 71 NYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGA 130
Query: 138 VS---TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA-LDLFR 193
T S+++ + N I+ + + +W I+ G G + +E + LDL+
Sbjct: 131 CPNQYTLSSVLKCCSRENNIQFGKGIH---------AW-ILRNGVGGDVVLENSILDLYL 180
Query: 194 RMPE-----------PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ E E++VVSWN +I A +R G +E + F +DV SW TI+
Sbjct: 181 KCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFP--NKDVVSWNTII 238
Query: 243 DCL 245
D L
Sbjct: 239 DGL 241
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
+S I K G D A +F+Q+ E ++ LW +MI+G G KEA LF+ M
Sbjct: 422 SSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGII 481
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+ + +LN G+I+E + F D V +++MVN Y + + EA+
Sbjct: 482 PNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKN 541
Query: 160 LFYE 163
+E
Sbjct: 542 FIFE 545
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 47/264 (17%)
Query: 5 LPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHAR 64
LP + + +T L+HGY +++ + S+ + N+ I+ K G TD A
Sbjct: 382 LPTILGVCSGPDYASTGELLHGYT-IKSGMGSSAPVG------NAIITMYAKCGDTDKAD 434
Query: 65 KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKE 124
VF MP R+ W MI + + G I +AR FD M ER+ W +ML+ Y++ G +E
Sbjct: 435 LVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEE 494
Query: 125 ARKLFDG-------PD--------------------------AEK-----SVSTWSTMVN 146
KL+ PD A K +VS +++V
Sbjct: 495 GLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVT 554
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVS 204
Y + I+EA+ F + ++ +SWN M+ + QNG K +D F M E + N +S
Sbjct: 555 MYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHIS 614
Query: 205 WNTIIKALVRCGRIEDAQWHFNQM 228
+ +++ G + + + +F+ M
Sbjct: 615 YVSVLSGCSHMGLVAEGKHYFDSM 638
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 46/203 (22%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--DTRLWTTMLNG 115
G T A +VF + R++ W+TMI + + +A KLFD+M R D+ WTTM++G
Sbjct: 57 GLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISG 116
Query: 116 YIECGMIKEARKLF-----DGPDAEKSVSTWS---------------------------- 142
Y + G + + F D D K+ +S
Sbjct: 117 YSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLG 176
Query: 143 ---------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
++V YVK ++ AE +F+++ WN M+ GY Q KAL +F
Sbjct: 177 FGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFN 236
Query: 194 RMPEPERNVVSWNTIIKALVRCG 216
RM PER+ VSWNT+I + G
Sbjct: 237 RM--PERDEVSWNTLISIFSQHG 257
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
L S E NS + K G D A VF + + W++MI GY + +
Sbjct: 171 LVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYK 230
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVK 150
A ++F++M ERD W T+++ + + G + +F + T+ ++++
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 151 INQIEEAERL---FYEMPERKDVSW-NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN 206
+ ++ L M D+ + N ++ Y + G ++ A +F+ + E + +SWN
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDH--ISWN 348
Query: 207 TIIKALVRCGRIEDAQWHFNQMQ 229
++I +V G EDA FNQM+
Sbjct: 349 SLITGVVHFGLGEDALILFNQMR 371
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A+ F L+ + NS ++ + G A+ FD + ++D+ W+ M+ + + G+ +
Sbjct: 537 ATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKV 596
Query: 95 RKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVN 146
F+ M + + + + ++L+G G++ E + FD +S +S MV+
Sbjct: 597 IDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVD 656
Query: 147 GYVKINQIEEAERLFYEMPERKDVS-WNIMMG 177
+ +E+A+ L MP + + + W+ ++G
Sbjct: 657 LLGRAGLLEQAKDLIEGMPFKPNATVWSALLG 688
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSW 238
Y G A +F+ RN+ +WNT+I+ALV R+ DA+ F++M R +D SW
Sbjct: 53 YSNCGLTHDAFQVFQE--THHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSW 110
Query: 239 TTIV 242
TT++
Sbjct: 111 TTMI 114
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 12/184 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ C+ GR + ARKVFD+M ERD+ W+ MI GY + G +E ++L+ +M + +
Sbjct: 194 NALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGK 253
Query: 108 --LWTTMLNGYI--ECGMIK------EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
L + G + CG K E + E V + ++ Y K + A
Sbjct: 254 GILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYA 313
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
LF EM E+ +VS+ ++ GY NG +++ALD+ + + P + +WN +I +V+ +
Sbjct: 314 RELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENP--GLSTWNDVIPGMVQNNQ 371
Query: 218 IEDA 221
E A
Sbjct: 372 FERA 375
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 57/247 (23%)
Query: 30 LRTRLASTFSLNTEMKRCNSFIS-----RLCKEGRTDHARKVFDQMPERDMRLWDTMING 84
L+T L T ++ S I RL ++G+ HAR F D + +I
Sbjct: 35 LKTNLLKTHGGGLDIAAYGSAIQHCTNHRLIRQGKQLHAR-FFPFAITPDNFIATKLITF 93
Query: 85 YIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD----------GPDA 134
Y K +I+ AR +FD++ +++ W +M+ Y + +A LF PD
Sbjct: 94 YAKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDN 153
Query: 135 ---------------------------------EKSVSTWSTMVNGYVKINQIEEAERLF 161
V + +V Y + +IE A ++F
Sbjct: 154 FTMTSILKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVF 213
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER-----NVVSWNTIIKALVRCG 216
EM ER V+WN M+GGY Q+G E+ L+ M E N V+ ++++A CG
Sbjct: 214 DEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQA---CG 270
Query: 217 RIEDAQW 223
+ +D +
Sbjct: 271 QSKDLSF 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 50/238 (21%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+ T++ CN+ I+ K G ++AR++FD+M E+D + ++I+GY+ G + EA +
Sbjct: 290 IETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLK 349
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWST----------- 143
+ W ++ G ++ + A L G + + +V T S+
Sbjct: 350 GIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNL 409
Query: 144 ------------------------MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
+V+ Y K+ I A R+F + R + W ++ Y
Sbjct: 410 RGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAY 469
Query: 180 GQNGQIEKALDLFRRM------PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+G AL L+ +M P+P V+ +++ A G + +A FN M +
Sbjct: 470 ASHGDASLALGLYNQMLDRGIQPDP----VTLTSVLTACAHSGLVNEAWDVFNAMPSK 523
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 124/242 (51%), Gaps = 21/242 (8%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLW 78
+ +GY LR L ++ + N+ I+ CK+ + D ++ M + +
Sbjct: 217 VFNGYELLRQVLEKGLCVDNTV--FNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTY 274
Query: 79 DTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDA 134
+ING +K EA ++F+ + +R D ++TT++ G+ + G++ EARKL+
Sbjct: 275 QEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQ 334
Query: 135 EKSVS---TWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEK 187
+ V T++ M+ GY K+ EA +L+ +M R VS++ M+ G +G+ ++
Sbjct: 335 KGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDE 394
Query: 188 ALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVD 243
AL LF M R+++S+N++IK L + G + A N++ Q E VSS+T ++
Sbjct: 395 ALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIK 454
Query: 244 CL 245
CL
Sbjct: 455 CL 456
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 46/237 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + K G+ A+++FD+M +RD+ W+ +++ Y K G++++ +FD+MA RD+
Sbjct: 70 NQLLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSV 129
Query: 108 LWTTMLNGYIECGMIKEARKLF-----DG------------------------------- 131
+ TM+ + + +A + F DG
Sbjct: 130 SYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRV 189
Query: 132 --PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+ EK+V W+ + + Y K I+ A LF M + VSWN+M+ GY + G+ ++ +
Sbjct: 190 VVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECI 249
Query: 190 DLFRRMP----EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
F +M +P++ VS +++ A + GR++DA+ F+++ ++D WTT++
Sbjct: 250 SFFNKMQLSGLKPDQVTVS--SVLNAYFQSGRVDDARNMFDKID--KKDEICWTTMI 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 48/238 (20%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEAR 95
+N + N IS K G+ D F++M + D +++N Y + G + +AR
Sbjct: 225 VNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDAR 284
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD------------------------- 130
+FD++ ++D WTTM+ GY + G ++A LF
Sbjct: 285 NMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLA 344
Query: 131 ---------------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
G D+ VS S +V+ Y K +A +F MP + + WN M
Sbjct: 345 SLYHGQAVHGKVILMGVDSNMLVS--SALVDMYCKCGVPLDARVIFETMPIKNVIIWNSM 402
Query: 176 MGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+ GY QNG+ E+AL L+ RM + + + +S+ ++ A + +++ + HF+ + E+
Sbjct: 403 ILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNMVKEGRKHFDSISEQ 460
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D + + +++ Y KCG I +A++LFD+M++RD W +L+ Y + G++++ +FD
Sbjct: 65 DSFIHNQLLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMA 124
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQ--NGQIEK 187
SVS ++TM+ + +A R F M E S+ + Q + ++ K
Sbjct: 125 CRDSVS-YNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGK 183
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + E E+NV WN + +CG I+ A+W F+ M +++ SW ++
Sbjct: 184 QIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMV--NKNLVSWNLMI 236
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 36/194 (18%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
+++ M ++ + CK G AR +F+ MP +++ +W++MI GY + G +EA L++
Sbjct: 361 VDSNMLVSSALVDMYCKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYE 420
Query: 100 QMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
+M + D + +L+ I M+KE RK FD + T
Sbjct: 421 RMLQENFKPDNISFVGVLSACINTNMVKEGRKHFDSISEQGMTPTLD------------- 467
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTIIKALVR 214
+ M+ G++G I+KALDL + MP +P+ + W+ ++ +
Sbjct: 468 ---------------HYACMIILLGRSGNIDKALDLIKGMPHKPDCRI--WSALLSVCSK 510
Query: 215 CGRIEDAQWHFNQM 228
G I+ A+ N +
Sbjct: 511 -GDIKTAEVAANHI 523
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 104/201 (51%), Gaps = 10/201 (4%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ ++ N+ ++ K G + A VFDQ+P +D W+T++ GY + G+ EA ++
Sbjct: 355 LDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYN 414
Query: 100 QMAE-RDT----RLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKI 151
M E RDT W +++ Y G +++ K+ V + +++ Y K
Sbjct: 415 MMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKC 474
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTII 209
++E+A LFYE+P V WN ++ G +G+ E+AL LF+ M + + +++ +++
Sbjct: 475 GRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLL 534
Query: 210 KALVRCGRIEDAQWHFNQMQE 230
A G +++ Q F+ MQ+
Sbjct: 535 SACSHSGLVDEGQKCFDIMQK 555
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 63/246 (25%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLW 109
I+ G +R FD + ++++ W+++I+ Y++ G EA +Q+
Sbjct: 60 LINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL-------- 111
Query: 110 TTMLNG-------YIECGMIKEARKLFDGPDA---------EKSVSTWSTMVNGYVKINQ 153
+M G Y ++K L DG E V +++V+ Y +
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGV 171
Query: 154 IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--------------- 198
++ A ++F +MP + SWN M+ G+ QNG AL + RM
Sbjct: 172 LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPV 231
Query: 199 ----------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
+ +V N +I + GR++DAQ F+QM+ RD+
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME--VRDLV 289
Query: 237 SWTTIV 242
SW +I+
Sbjct: 290 SWNSII 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 51/241 (21%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S + + G D A KVF MP +D+ W+ MI+G+ + G A + ++M ++
Sbjct: 161 SLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKM 220
Query: 109 WTTMLNGYIEC---------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
T + + G++ L G D++ VS + ++N Y K ++++A+
Sbjct: 221 DTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVS--NALINMYSKFGRLQDAQM 278
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PE---------------- 197
+F +M R VSWN ++ Y QN AL F+ M P+
Sbjct: 279 VFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD 338
Query: 198 ----------------PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
+++VV N ++ + G + A F+Q+ +D SW T+
Sbjct: 339 QRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP--RKDTISWNTL 396
Query: 242 V 242
V
Sbjct: 397 V 397
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 93/219 (42%), Gaps = 46/219 (21%)
Query: 16 HKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
H + +IHGY +S L ++ NS ++ C G AR VFD++P ++
Sbjct: 121 HDCSFGKMIHGY-------SSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNV 173
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD----- 130
W MI+GY K G + AR FD+ E+D +W M++GY++ KE+ LF
Sbjct: 174 VSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLT 233
Query: 131 --GPDAEKSVSTWS--------------------------------TMVNGYVKINQIEE 156
PD VS S ++++ Y K +E
Sbjct: 234 DIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLEL 293
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
A+RLF M R V WN M+ G +G + AL LF M
Sbjct: 294 AKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDM 332
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 52/265 (19%)
Query: 25 HGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMING 84
H F +TF+L+ + C+S E T +A +VF+Q+ + +++T+I
Sbjct: 25 HAQVFTTGLENNTFALSRVLAFCSSHKHH--HESLT-YACRVFEQIQNPTVCIYNTLIKA 81
Query: 85 YIKCGMIKEARKLFDQMAERDTR-------------------LWTTMLNGY--------- 116
++ K A ++F +M + + + + M++GY
Sbjct: 82 FLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFD 141
Query: 117 ---------IEC--GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ C G + AR +FD + VS WS M++GY K+ ++ A F E P
Sbjct: 142 IYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVS-WSVMISGYAKVGDVDSARLFFDEAP 200
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIEDA 221
E+ W M+ GY QN +++L LFR M P+ ++ + +I+ A G +E
Sbjct: 201 EKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESI--FVSILSACAHLGALEIG 258
Query: 222 QW---HFNQMQERERDVSSWTTIVD 243
W H NQ++ V T+++D
Sbjct: 259 VWIHQHLNQLKLVPLSVRLSTSLLD 283
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
A+ +F M D+ W MI GY KCG + ARKLFD+M ++ W+TM+NGY+
Sbjct: 37 AKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCF 96
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG---- 178
+A ++F+ E V+ V+ + + E+ YE R ++ N+++G
Sbjct: 97 DKAVEIFEILIDEGLVANEVGAVSACAHLGALAAGEKA-YEHAIRINLDLNVILGTAIVD 155
Query: 179 -YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
Y + G +EKA+ +F M E++V+SW ++I + G E+A +F M
Sbjct: 156 MYARCGNVEKAVRVFEEM--KEKDVISWTSLISGVAMHGYAEEALEYFYVM 204
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQ 153
A+ +F M D WT M+ GY +CG + ARKLFD K++ TWSTM+NGY++ N
Sbjct: 37 AKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPV-KNLVTWSTMINGYLRNNC 95
Query: 154 IEEAERLFYEMPERKDVSWNI----MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++A +F + + V+ + G EKA + R+ + NV+ I+
Sbjct: 96 FDKAVEIFEILIDEGLVANEVGAVSACAHLGALAAGEKAYEHAIRI-NLDLNVILGTAIV 154
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
RCG +E A F +M +E+DV SWT+++
Sbjct: 155 DMYARCGNVEKAVRVFEEM--KEKDVISWTSLIS 186
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G D ARK+FD+MP +++ W TMINGY++ +A ++F+ + D L +
Sbjct: 61 KCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILI--DEGLVANEVGA 118
Query: 116 YIEC---GMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
C G + K ++ + + +V + +V+ Y + +E+A R+F EM E+
Sbjct: 119 VSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDV 178
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPE---PERNVVSWNTIIKALVRCGRIEDAQWHFN 226
+SW ++ G +G E+AL+ F M + R+ +++ ++KA G +E Q F
Sbjct: 179 ISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRD-ITFTAVLKAYSHGGLVEKGQEIFE 237
Query: 227 QMQERER 233
M+ R
Sbjct: 238 SMKRDYR 244
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE-----RDTRLWTTM 112
G + A +VF++M E+D+ W ++I+G G +EA + F M + RD +T +
Sbjct: 161 GNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDIT-FTAV 219
Query: 113 LNGYIECGMIKEARKLFDGPD----AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
L Y G++++ +++F+ E + + MV+ + ++EEAE EMP +
Sbjct: 220 LKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIKP 279
Query: 169 DVSWNIMMGGY 179
+ GY
Sbjct: 280 NAPMKPEHSGY 290
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 15/216 (6%)
Query: 27 YPFLRTRLASTFSLNTEMKRCNSFISRL----CKEGRTDHARKVFDQMPERDMRLWDTMI 82
YP + + + + T +R +S + L K G T A KVF+ + +D+ W M+
Sbjct: 408 YPVFVSEMHAEV-IKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAML 466
Query: 83 NGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAE--- 135
GY + G +EA KLF Q+ + + +++++N E K F +
Sbjct: 467 AGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRL 526
Query: 136 -KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
++ S +V Y K I+ A +F ER VSWN M+ GY Q+GQ +KAL++F
Sbjct: 527 NNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDE 586
Query: 195 MPEPERNV--VSWNTIIKALVRCGRIEDAQWHFNQM 228
M + +V V++ +I A G +E Q +FN M
Sbjct: 587 MQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSM 622
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 32/176 (18%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
LN + ++ ++ K G D A +VF + ERD+ W++MI+GY + G K+A ++FD
Sbjct: 526 LNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFD 585
Query: 100 QMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
+M +R D + ++ G++++ +K F+ +M+N + IN
Sbjct: 586 EMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFN------------SMINDH-HIN--- 629
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
P K ++ M+ Y + G +EKA+ + MP P V W T++ A
Sbjct: 630 ---------PTMKH--YSCMIDLYSRAGMLEKAMGIINEMPFPPGATV-WRTLLGA 673
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 54/257 (21%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F L + S + K + R+VFD+M ER++ W +++ GY G+ +L
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181
Query: 98 FDQMAER---------DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGY 148
F QM T + + G + G+ A + G E+++ ++++++ Y
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG--FEEAIPVFNSLISLY 239
Query: 149 VKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVS 204
++ + +A +F +M R V+WN M+ GY +NGQ + ++F +M +P ++
Sbjct: 240 SRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTH--MT 297
Query: 205 WNTIIK-----------------------------------ALVRCGRIEDAQWHFNQMQ 229
+ ++IK AL +C ++DA F+ M+
Sbjct: 298 FASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLME 357
Query: 230 ERERDVSSWTTIVD-CL 245
E ++V SWT ++ CL
Sbjct: 358 EG-KNVVSWTAMISGCL 373
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS IS + G AR VFD+M RD W++MI GY++ G E ++F++M +
Sbjct: 233 NSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVK 292
Query: 108 LWTTMLNGYIE-CGMIKE--------ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
I+ C ++E + L G ++ V T ++ K ++++A
Sbjct: 293 PTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVIT--ALMVALSKCKEMDDAL 350
Query: 159 RLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRM 195
LF M E K+ VSW M+ G QNG ++A++LF +M
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQM 388
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I+ L EG +V + E + +++++I+ Y + GM+++AR +FD+M
Sbjct: 198 STVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI 257
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVN--------GYVKIN 152
RD W +M+ GY+ G E ++F+ + + T+++++ VK+
Sbjct: 258 RDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLM 317
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL 212
Q + + F + +M + +++ AL LF M E +NVVSW +I
Sbjct: 318 QCKALKSGF----TTDQIVITALMVALSKCKEMDDALSLFSLMEEG-KNVVSWTAMISGC 372
Query: 213 VRCGRIEDAQWHFNQMQ 229
++ G + A F+QM+
Sbjct: 373 LQNGGNDQAVNLFSQMR 389
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
++ IS K G +R++FD MP RD W+ I+ Y + GM EA LF M E
Sbjct: 258 SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVD 317
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ T +L+ G + +++ + + + + +++ Y K +E A+R+
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRV 377
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCG 216
F +MP + D SWN M+ +G+ ++AL LF RM + N +++ +++ A V G
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAG 437
Query: 217 RIEDAQWHFNQMQ 229
+++ F+ M
Sbjct: 438 LVDEGYRLFDMMS 450
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 119/316 (37%), Gaps = 95/316 (30%)
Query: 7 PLSFILMHAHK-LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARK 65
PL+ L H K LN P +PF+ A N E R R H +
Sbjct: 99 PLTLHLYHQMKTLNISPNNFTFPFVFLACA-----NLEEIRM----------ARLAHC-E 142
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
VF + D ++M+ Y +CG ARK+FD++ E+D W ++L+GY + G +EA
Sbjct: 143 VFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREA 202
Query: 126 RKLFD--------GPDAEKSVST--------------W-----------------STMVN 146
++F PD VS W S +++
Sbjct: 203 VEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALIS 262
Query: 147 GYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP-------- 198
Y K ++ + R+F MP R ++WN + Y QNG ++A+ LF M E
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVT 322
Query: 199 -----------------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ ++ +I +CG +E AQ FN M
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDM- 381
Query: 230 ERERDVSSWTTIVDCL 245
R+ D +SW ++ L
Sbjct: 382 PRKND-ASWNAMISAL 396
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 119/219 (54%), Gaps = 23/219 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK+ HA + +M + D+ + T+I G + G +KEA LF+QM
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQI 154
+ D + +++G + G +K+AR + G D+ ++ T++++++GY + Q
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDS--NIVTYNSLMDGYFLVKQE 325
Query: 155 EEAERLFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTI 208
+A +F M R DV S++IM+ G + +++A++LF+ M N V++N++
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSL 385
Query: 209 IKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
I L++ GRI DA N+M R + DV ++++++D L
Sbjct: 386 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDAL 424
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 108/217 (49%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N + LCKEG AR V M + ++ ++++++GY +A +F+ MA
Sbjct: 278 NILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMAR 337
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R D + ++ M+NG + M+ EA LF + T++++++G +K +I +
Sbjct: 338 RGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISD 397
Query: 157 AERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A L EM R ++++ ++ +N Q++KA+ L ++ + + N+ ++ ++
Sbjct: 398 AWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVD 457
Query: 211 ALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVDCL 245
L + GR++DAQ + + + DV + +V+ L
Sbjct: 458 GLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGL 494
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 104/247 (42%), Gaps = 48/247 (19%)
Query: 47 CNSFISRLCKEGRTDHARKVFD----QMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
CN+ I G AR+VFD ++ + D+ ++MI GY KCG I E+R LFD M
Sbjct: 165 CNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMI 224
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK-------------------------- 136
R + W +M++GY+ G + EA +LF+ E
Sbjct: 225 TRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKW 284
Query: 137 ------------SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
+V + +++ Y K +E A +F P R WN ++ G NG
Sbjct: 285 VHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGH 344
Query: 185 IEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQ---ERERDVSSW 238
+A + F ++ + + VS+ ++ A G I A+ +F M E E + +
Sbjct: 345 EREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHY 404
Query: 239 TTIVDCL 245
T IVD L
Sbjct: 405 TCIVDVL 411
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 48/233 (20%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM---------------- 101
G ++A K+F +MP ++ W+T+I + + + A LF M
Sbjct: 75 GNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVF 134
Query: 102 -----------------------AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE--- 135
+ D + T++ Y G++ EAR++FDG E
Sbjct: 135 KAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYD 194
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
V ++M+ GY K +I+E+ LF +M R VSWN M+ GY +NG++ +AL+LF +M
Sbjct: 195 HDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKM 254
Query: 196 PEPERNVVSWNTIIKALVRC---GRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+ E VS T++ L C G ++ +W + ++ E +V T I+D
Sbjct: 255 -QVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIID 306
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ IS + G ++ARKVFD+M + ++ W+ ++ +CG ++ A LF++M R+
Sbjct: 152 TTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRNLT 211
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W TML GY++ G + AR++F S WSTM+ G+ K +A F E+
Sbjct: 212 SWNTMLAGYVKAGQLWLARRVFCEMKMRDDAS-WSTMIVGFAKSGSFHDAFGFFKELLRD 270
Query: 168 KD----VSWNIMMGGYGQNGQIE--KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
++ VS ++ Q G E K L F V N +I +CG ++ A
Sbjct: 271 RNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMA 330
Query: 222 QWHFNQMQERERDVSSWTTIVDCL 245
+ F M E+ + SWT+++ L
Sbjct: 331 KLVFQHMSA-EKCIVSWTSMIAAL 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 26/239 (10%)
Query: 17 KLNTHPLIHGYP---FLRTRLASTFS----------LNTEMKRCN-----SFISRLCKEG 58
+L++H HG+ F+ T L S ++ + EM + N + ++ + G
Sbjct: 134 QLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCG 193
Query: 59 RTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE 118
+ A +F++MP R++ W+TM+ GY+K G + AR++F +M RD W+TM+ G+ +
Sbjct: 194 DVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAK 253
Query: 119 CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE--RLFYEMPERKDVSW---- 172
G +A F +++ + ++ Q E ++ + E+
Sbjct: 254 SGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSV 313
Query: 173 -NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
N ++ Y + G ++ A +F+ M E+ +VSW ++I AL GR ++A F++M+E
Sbjct: 314 NNALIDTYSKCGNVDMAKLVFQHM-SAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEE 371
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 55 CKEGRTDH----ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-- 108
C +DH + ++F P D +++T+I + + F Q+ T L
Sbjct: 52 CAVSISDHVLNYSLRLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPD 111
Query: 109 ---WTTMLNGYIECGMIK------EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+ L G G K + G D V T T+++ Y + E A +
Sbjct: 112 SFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGT--TLISMYAECGCYEYARK 169
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+F EM + V+WN ++ + G +E A LF RM P RN+ SWNT++ V+ G++
Sbjct: 170 VFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERM--PVRNLTSWNTMLAGYVKAGQLW 227
Query: 220 DAQWHFNQMQERERDVSSWTTIV 242
A+ F +M + RD +SW+T++
Sbjct: 228 LARRVFCEM--KMRDDASWSTMI 248
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 46/227 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N+ ++ K G+ AR+VF +M RD W TMI G+ K G +A F ++
Sbjct: 214 NTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNR 273
Query: 102 -------------AERDTRLWTTMLNGYIE--------------------CGMIKEARKL 128
A+ + +L+G++E CG + A+ +
Sbjct: 274 PSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLV 333
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE---RKD-VSWNIMMGGYGQNGQ 184
F AEK + +W++M+ + +EA R+F+EM E R D V++ ++ +G
Sbjct: 334 FQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGL 393
Query: 185 IEKALDLFRRMPE---PERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+E+ LF +M E + + ++ R R++ A QM
Sbjct: 394 VEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQM 440
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK+ ++ +M + ++T+I G+ G +KEA L +QM+
Sbjct: 198 NTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMSM 257
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D +TT+++G + G +K+AR + E + T+S++++GY + ++ +
Sbjct: 258 KNISPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNK 317
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A+ LF +P R S+NIM+ G +N + +A +LF+ M + VS+N++I
Sbjct: 318 AKHLFNTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLID 377
Query: 211 ALVRCGRIEDAQWHFNQMQE--RERDVSSWTTIVDCL 245
L + GRI D +M + + +V ++ +++D L
Sbjct: 378 GLCKSGRISDVWDLLVEMHDIGQPANVITYNSLLDAL 414
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLN-TEMKRCN-------SFISRLCKEGRTDHAR 64
+H + + + LI+G+ L + LN MK + + + LCK+G AR
Sbjct: 225 IHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISPDVLTFTTLVDGLCKQGEVKKAR 284
Query: 65 KVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGY 116
V M E D+ + ++++GY + +A+ LF+ + R + + M+NG
Sbjct: 285 HVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNIMINGL 344
Query: 117 IECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE----RKD 169
+ M+ EA LF + +++++++G K +I + L EM +
Sbjct: 345 CKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVWDLLVEMHDIGQPANV 404
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
+++N ++ +N Q++KA+ L +++ + + N+ ++ ++ L + GR+EDAQ ++
Sbjct: 405 ITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHD 464
Query: 228 MQER--ERDVSSWTTIVD 243
+ + +VS + +V+
Sbjct: 465 LLTKGYPLNVSMYNVMVN 482
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 22 PLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTM 81
P H +PFL L + SL+ + C + + K G D + + +
Sbjct: 136 PGKHTFPFL---LKACSSLSNVLPHCKQVHAHVVKFGLC------------FDCHVGNGL 180
Query: 82 INGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSV 138
+ GY G + +AR +FD++ ++ LWTTM+ GY + EA LF+ E +
Sbjct: 181 VRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNG 240
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQNGQIEKALDLFR 193
+T +++++ + +E ER+ +E K V +++G Y +NG I A LF
Sbjct: 241 ATLASVLSVCARSGCLELGERI-HEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFD 299
Query: 194 RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
MPE RNVV+WN +I L G +EDA F M+E E V + T V L
Sbjct: 300 EMPE--RNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVL 349
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 1 MAKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT 60
+ K LS +L H +++ H F L + N + G
Sbjct: 144 LLKACSSLSNVLPHCKQVHAH-------------VVKFGLCFDCHVGNGLVRGYSVSGDL 190
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGY 116
AR VFD++P +++ LW TMI GY + EA LF++M E + ++L+
Sbjct: 191 VDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVC 250
Query: 117 IECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
G ++ ++ + E V + +V Y K I A +LF EMPER V+WN
Sbjct: 251 ARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWN 310
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPE---RNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
M+ G +G +E AL LF M E E N V++ ++ A G I+ + F M+
Sbjct: 311 AMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKV 370
Query: 231 R---ERDVSSWTTIVDCL 245
E + + +VD L
Sbjct: 371 VHGIEPTIEHYGCMVDLL 388
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 48/251 (19%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F ++ N+ I+ L G A VF++ RD+ W++MI G +K G+ EA K+
Sbjct: 187 FGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKI 246
Query: 98 FDQMAERDTR---------------------------------------LWTTMLNGYIE 118
+ +M R L +++ Y++
Sbjct: 247 YKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVK 306
Query: 119 CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
CG + AR LFD A+K++ +W+TMV GY + ++ A + Y++PE+ V WN ++ G
Sbjct: 307 CGELLTARVLFDNM-AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISG 365
Query: 179 YGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIEDAQW--HFNQMQERE 232
Q Q ++AL LF M EP++ V+ + A + G ++ W H+ + +
Sbjct: 366 CVQAKQGKEALALFHEMQIRTIEPDK--VTMVNCLSACSQLGALDVGIWIHHYIERHKLS 423
Query: 233 RDVSSWTTIVD 243
DV+ T +VD
Sbjct: 424 IDVALGTALVD 434
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 44/226 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + K G AR +FD M ++ + W TM+ GY + G + AR++ ++ E+
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 108 LWTTMLNGYIECGMIKEARKLFDG-------PD--------------AEKSVSTW----- 141
W +++G ++ KEA LF PD V W
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 142 ------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+ +V+ Y K I A ++F E+P+R ++W ++ G +G + AL
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 190 DLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
F +M P+ +++ ++ A G +E+ + +F++M +
Sbjct: 478 SYFSKMIHIGIVPDE--ITFLGVLSACCHGGLVEEGRKYFSEMSSK 521
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ ++ + + K G A +VF+++P+R+ W +I G G ++A F
Sbjct: 422 LSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFS 481
Query: 100 QMAE----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST----WSTMVNGYVKI 151
+M D + +L+ G+++E RK F ++ +VS +S MV+ +
Sbjct: 482 KMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRA 541
Query: 152 NQIEEAERLFYEMPERKDVS 171
+EEAE L MP D +
Sbjct: 542 GHLEEAEELVKNMPMAADAA 561
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 46/234 (19%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
FLR+ +T + + + N +++L K G+ + ARK+FD+MP++D W+TMI+ Y+
Sbjct: 20 AFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVN 79
Query: 88 CGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDA-------- 134
G + EAR+LFD + + + W+++++GY + G EA LF +G A
Sbjct: 80 VGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSV 139
Query: 135 -------------------------EKSVSTWSTMVNGYVKINQIEEAERLF--YEMPER 167
E +V + +V+ Y K + EAE LF E +
Sbjct: 140 LRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRK 199
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA----LVRC 215
V W M+ GY QNG KA++ FR M E N ++ TI+ A L RC
Sbjct: 200 NHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARC 253
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 51/261 (19%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG+ + S F N ++ ++ + K G +A+ + + M + D+ W++++
Sbjct: 258 VHGFI-----VKSGFGSNVYVQ--SALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMV 310
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI-----KEARKLFDGPDAEKSV 138
G+++ G+ +EA +LF M R+ ++ + C ++ K L E
Sbjct: 311 GFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYK 370
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--- 195
+ +V+ Y K ++ A +F +M E+ +SW ++ GY QN E++L +F M
Sbjct: 371 LVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT 430
Query: 196 -PEPERNVVS---------------------------------WNTIIKALVRCGRIEDA 221
P++ +V+ +N+++ +CG ++DA
Sbjct: 431 GVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDA 490
Query: 222 QWHFNQMQERERDVSSWTTIV 242
F MQ +DV +WT I+
Sbjct: 491 DAIFVSMQ--VKDVITWTAII 509
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ + K G D A VF++M E+D+ W +++ GY + +E+ K+F M
Sbjct: 374 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 433
Query: 104 RDTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
D + ++L+ E +++ +++ F S S ++++V Y K +++A+ +
Sbjct: 434 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 493
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRI 218
F M + ++W ++ GY QNG+ +L + M + +++ ++ A G +
Sbjct: 494 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLV 553
Query: 219 EDAQWHFNQMQE 230
++ + +F QM +
Sbjct: 554 DEGRKYFQQMNK 565
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
AS F+L + ++ C+S L + G H V + E ++ + +++ Y KC + EA
Sbjct: 131 ASQFTLGSVLRVCSSL--GLIQTGEMIHGFVVKNGF-EGNVFVVTGLVDMYAKCKCVSEA 187
Query: 95 RKLFD--QMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYV 149
LF + ++ LWT M+ GY + G +A + F E + T+ T++
Sbjct: 188 EFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACS 247
Query: 150 KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL-DLFRRMPE----------- 197
+ R F E V I+ G+G N ++ AL D++ + +
Sbjct: 248 SV-----LARCFGE-----QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETM 297
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT--TIVDC 244
+ +VVSWN+++ VR G E+A F M R + +T ++++C
Sbjct: 298 EDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC 346
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 122/217 (56%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
++ I +CK+ + A ++ +M + ++ + +I+G+ G +K+A LF++M
Sbjct: 228 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMIL 287
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + +++G+ + G +KE + +F + +V T+ ++++GY + ++ +
Sbjct: 288 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 347
Query: 157 AERLFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A+ + Y M +R D+ S+NI++ G+ + ++++A++LF+ M +VV++N++I
Sbjct: 348 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 407
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + G+I A ++M +R D+ ++++I+D L
Sbjct: 408 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 444
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 107/216 (49%), Gaps = 25/216 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N + CK+G+ + VF M ++ ++ + ++++GY + +A+ + M++
Sbjct: 298 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ 357
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKIN 152
R D + + +++G+ + + EA LF PD V T++++++G K+
Sbjct: 358 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPD----VVTYNSLIDGLCKLG 413
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWN 206
+I A +L EM +R ++++ ++ +N Q++KA+ L ++ + N+ ++
Sbjct: 414 KISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYT 473
Query: 207 TIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+I L + GR+EDA F + + +++ T V
Sbjct: 474 ILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 509
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 108/228 (47%), Gaps = 21/228 (9%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEA 94
+N + N I+ C+ G A VF ++ + + T+I G G I +A
Sbjct: 114 GINPDFFTFNILINCFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQA 173
Query: 95 RKLFDQMAERDTRL----WTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNG 147
D + +L + T+++G + G + A L DG + +V +ST+++G
Sbjct: 174 LLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDG 233
Query: 148 YVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERN 201
K + +A L+ EM + V+++ ++ G+ GQ++ A+DLF +M + +
Sbjct: 234 MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPD 293
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVD--CL 245
V ++N ++ + G++++ + F M Q + +V ++ +++D CL
Sbjct: 294 VYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 341
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 95/191 (49%), Gaps = 17/191 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
+N +++ N I CK + D A +F +M + D+ ++++I+G K G I A
Sbjct: 359 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 418
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNG 147
KL D+M +R D ++++L+ + + +A L + ++ T++ +++G
Sbjct: 419 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 478
Query: 148 YVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RN 201
K ++E+A +F ++ + ++ +M+ G+ G ++AL L +M + +
Sbjct: 479 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPD 538
Query: 202 VVSWNTIIKAL 212
V++ II++L
Sbjct: 539 AVTYEIIIRSL 549
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 43/211 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + CK ++A VFD+MP+RD+ W+TMI GY G ++ A+ LFD M ERD
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVV 136
Query: 108 LWTTMLNGYIECGMIKEARKLFD------------------------------------- 130
W +ML+ Y++ G +++ ++F
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196
Query: 131 ---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
G D++ V T + +V+ Y +++ A +F EMPER V W+ ++ GY +N + +
Sbjct: 197 IQMGFDSD--VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTE 254
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
L L++ M + E VS T A C +
Sbjct: 255 GLKLYKVMLD-EGMGVSQATFASAFRSCAGL 284
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F+ T + C + + + G+ H + + Q+ D+ + T+++ Y KCG ++++R +
Sbjct: 575 FTYATVLDICANLAT--VELGKQIHGQILKLQL-HSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQI 154
F++ +RD W+ M+ Y G+ ++A KLF+ + + + + + +++ + +
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 155 EEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++ F EM + ++ M+ G++GQ+ +AL+L MP +V+ W T++
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVI-WRTLL 750
Query: 210 KALVRCGRIEDAQWHFNQ-MQERERDVSSWTTI 241
G +E A+ N +Q +D S++ +
Sbjct: 751 GICRLQGNVEVAEKAANSLLQLDPQDSSAYVLL 783
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 52/234 (22%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTML 113
CK + DHA +F +MPER+ W +I GY++ E KL+ M + + T
Sbjct: 218 CK--KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFA 275
Query: 114 NGYIEC--------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ + C G A L + V T + ++ Y K +++ +A ++F P
Sbjct: 276 SAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTAT--LDMYAKCDRMVDARKVFNTFP 333
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--------------------------- 198
S N ++ GY + Q+ +AL++FR + +
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393
Query: 199 ----------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ N+ NTI+ +CG + +A F+ M+ +D SW I+
Sbjct: 394 LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDME--IKDAVSWNAII 445
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
++ I CK G A K+ +++ ER W+++I+G+ + A F +M +
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERL 160
D + T+L+ ++ +++ V ST+V+ Y K ++++ +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRI 218
F + P+R V+W+ M+ Y +G E A+ LF M + N + ++++A G +
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 219 EDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+ +F +M+ + + ++ +VD L
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLL 721
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
SL+ + C++ L EG H V + + ++ + +T+++ Y KCG + EA +F
Sbjct: 374 SLSGALTACSAIKGYL--EGIQLHGLAVKCGL-DFNICVANTILDMYAKCGALMEACLIF 430
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PD-----------AEKSVST 140
D M +D W ++ + + ++E LF PD A K
Sbjct: 431 DDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALN 490
Query: 141 WSTMVNG--------------------YVKINQIEEAERLFYEMPERKDVSWNIMMGGYG 180
+ V+G Y K + EAE++ + ER VSWN ++ G+
Sbjct: 491 YGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFS 550
Query: 181 QNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RD 234
Q E AL F RM + P+ ++ T++ +E + Q+ + + D
Sbjct: 551 SEKQGENALSYFSRMLQVGVIPDN--FTYATVLDICANLATVELGKQIHGQILKLQLHSD 608
Query: 235 VSSWTTIVD 243
V +TIVD
Sbjct: 609 VYIASTIVD 617
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 43/211 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N + CK ++A VFD+MP+RD+ W+TMI GY G ++ A+ LFD M ERD
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVV 136
Query: 108 LWTTMLNGYIECGMIKEARKLFD------------------------------------- 130
W +ML+ Y++ G +++ ++F
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196
Query: 131 ---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
G D++ V T + +V+ Y +++ A +F EMPER V W+ ++ GY +N + +
Sbjct: 197 IQMGFDSD--VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTE 254
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
L L++ M + E VS T A C +
Sbjct: 255 GLKLYKVMLD-EGMGVSQATFASAFRSCAGL 284
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F+ T + C + + + G+ H + + Q+ D+ + T+++ Y KCG ++++R +
Sbjct: 575 FTYATVLDICANLAT--VELGKQIHGQILKLQL-HSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQI 154
F++ +RD W+ M+ Y G+ ++A KLF+ + + + + + +++ + +
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 155 EEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++ F EM + ++ M+ G++GQ+ +AL+L MP +V+ W T++
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVI-WRTLL 750
Query: 210 KALVRCGRIEDAQWHFNQ-MQERERDVSSWTTI 241
G +E A+ N +Q +D S++ +
Sbjct: 751 GICRLQGNVEVAEKAANSLLQLDPQDSSAYVLL 783
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 52/234 (22%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTML 113
CK + DHA +F +MPER+ W +I GY++ E KL+ M + + T
Sbjct: 218 CK--KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFA 275
Query: 114 NGYIEC--------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ + C G A L + V T + ++ Y K +++ +A ++F P
Sbjct: 276 SAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTAT--LDMYAKCDRMVDARKVFNTFP 333
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--------------------------- 198
S N ++ GY + Q+ +AL++FR + +
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393
Query: 199 ----------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ N+ NTI+ +CG + +A F+ M+ +D SW I+
Sbjct: 394 LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDME--IKDAVSWNAII 445
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
++ I CK G A K+ +++ ER W+++I+G+ + A F +M +
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERL 160
D + T+L+ ++ +++ V ST+V+ Y K ++++ +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIM 631
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRI 218
F + P+R V+W+ M+ Y +G E A+ LF M + N + ++++A G +
Sbjct: 632 FEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFV 691
Query: 219 EDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+ +F +M+ + + ++ +VD L
Sbjct: 692 DKGLHYFREMRSHYGLDPQMEHYSCMVDLL 721
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 49/249 (19%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
SL+ + C++ L EG H V + + ++ + +T+++ Y KCG + EA +F
Sbjct: 374 SLSGALTACSAIKGYL--EGIQLHGLAVKCGL-DFNICVANTILDMYAKCGALMEACLIF 430
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PD-----------AEKSVST 140
D M +D W ++ + + ++E LF PD A K
Sbjct: 431 DDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALN 490
Query: 141 WSTMVNG--------------------YVKINQIEEAERLFYEMPERKDVSWNIMMGGYG 180
+ V+G Y K + EAE++ + ER VSWN ++ G+
Sbjct: 491 YGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFS 550
Query: 181 QNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RD 234
Q E AL F RM + P+ ++ T++ +E + Q+ + + D
Sbjct: 551 SEKQGENALSYFSRMLQVGVIPDN--FTYATVLDICANLATVELGKQIHGQILKLQLHSD 608
Query: 235 VSSWTTIVD 243
V +TIVD
Sbjct: 609 VYIASTIVD 617
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 19/193 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF-DQMAERDTR 107
S I K G T HAR +FDQM RD+ W+ +I GY + G + A +LF D + E
Sbjct: 96 SLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKP 155
Query: 108 LWTTMLNGYIECG---MIKEARKLFD-GPDAEKSVSTW--STMVNGYVKINQIEEAERLF 161
TT+++ CG +I + R + G A + + + +++ Y K + +E ++ LF
Sbjct: 156 NQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLF 215
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PER----NVVSWNTIIK--- 210
EM E+ VSWN M+G YGQNG +KA+ F+ M + P N+VS N +
Sbjct: 216 DEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENVH 275
Query: 211 -ALVRCGRIEDAQ 222
+V+CG DA
Sbjct: 276 CYVVKCGFTNDAS 288
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
S + K+G T+ A++++ P +D+ +I+ Y + G I+ A + F Q + D +
Sbjct: 292 SLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKP 351
Query: 109 WTTMLNGYIECGMIKEAR----KLFDGPDAEKSVSTWSTMVNG----YVKINQIEEAERL 160
L G + G+ + F G + +S + NG Y + ++IE A L
Sbjct: 352 DAVALIGVLH-GITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSL 410
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
FY+M E+ ++WN M+ G Q G+ A++LF M
Sbjct: 411 FYDMREKPLITWNSMISGCVQAGKSSDAMELFSEM 445
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ + N IS + + A +F M E+ + W++MI+G ++ G +A +LF
Sbjct: 384 LSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFS 443
Query: 100 QMA----ERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVK 150
+M+ + D ++L+G + G ++ L + E + T +++ Y K
Sbjct: 444 EMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGT--ALIDMYSK 501
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWN 206
+++ AE++FY + + +WN ++ GY G A + ++ E P++ +++
Sbjct: 502 CGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDK--ITFL 559
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER 231
++ A G + +FN M +
Sbjct: 560 GVLAACTHGGLVYLGLEYFNIMTKE 584
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+ +++++ Y+K+ A +F +M R VSWN+++ GY QNG + A+ LF M
Sbjct: 91 IHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR 150
Query: 198 PERNVVSWNTIIKALVRCGRIE 219
E + TI+ L CG E
Sbjct: 151 -ENFKPNQTTIVSLLPSCGCFE 171
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 121/235 (51%), Gaps = 26/235 (11%)
Query: 35 ASTFSLNTEMKRCN-------SFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMIN 83
A + L + K C+ S I L + GR D A ++++M + D + ++ ++I
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEARKLFDGPDAEK--- 136
+ KCG ++ K++ +M R +LN Y++C G +++ R LF+ A+
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP 585
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLF 192
V ++S +++G VK E +LFYEM E+ DV ++N ++ G+ ++G+++KA L
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLL 645
Query: 193 RRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD--VSSWTTIVD 243
M + VV++ +++ L + R+++A F + + D V +++++D
Sbjct: 646 EEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLID 700
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 109/199 (54%), Gaps = 17/199 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS++ + K G + R +F+++ + D+R + +I+G +K G +E KLF +M E
Sbjct: 556 NSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKE 615
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + T+++G+ + G + +A +L + + +V T+ ++V+G KI++++E
Sbjct: 616 QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDE 675
Query: 157 AERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A LF E + V ++ ++ G+G+ G+I++A + + + N +WN ++
Sbjct: 676 AYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLD 735
Query: 211 ALVRCGRIEDAQWHFNQMQ 229
ALV+ I++AQ F M+
Sbjct: 736 ALVKAEEIDEAQVCFQNMK 754
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+ I L R D +F QM E ++ L+ T++ + + G I A L D+M
Sbjct: 207 TTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKS 266
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEE 156
D L+ ++ + + G + A K F A+ V T++T++ K +++E
Sbjct: 267 NSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDE 326
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A LF E+ + V ++N M+ GYG G+ ++A L R +V+++N I+
Sbjct: 327 AVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILT 386
Query: 211 ALVRCGRIEDA-QWHFNQMQERERDVSSWTTIVDCL 245
L R G++E+A + H Q+ +++++ ++D L
Sbjct: 387 CLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDML 422
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 117/235 (49%), Gaps = 31/235 (13%)
Query: 23 LIHGYPFLRTRLA-STFSLNTEMKR---------CNSFISRLCKEGRTDHARKVFDQMPE 72
LIHG ++ + T+ L EMK N+ I CK G+ D A ++ ++M
Sbjct: 593 LIHG--LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650
Query: 73 RDMR----LWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKE 124
+ ++ + ++++G K + EA LF++ + + +++++++G+ + G I E
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710
Query: 125 ARKLFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMM 176
A + + +K ++ TW+ +++ VK +I+EA+ F M K ++++IM+
Sbjct: 711 AYLILE-ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769
Query: 177 GGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
G + KA ++ M + + N +++ T+I L + G + +A+ F++ +
Sbjct: 770 NGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFK 824
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 107/251 (42%), Gaps = 53/251 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+ I LCK R D A ++F+++ + ++TMI GY G EA L ++
Sbjct: 312 TTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371
Query: 104 RDTRLWTTMLNGYIEC----GMIKEARKLFDG--PDAEKSVSTWSTMVNGYVKINQIEEA 157
+ N + C G ++EA ++ D DA +++T++ +++ K ++E A
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAA 431
Query: 158 ERLFYEMPE---------------------RKDVSWNIMMG------------------G 178
++ M E + D + +I +G G
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Query: 179 YGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERD 234
G+ G+++ A L+ +M + ++ NVV + ++I+ +CGR ED + +M R D
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551
Query: 235 VSSWTTIVDCL 245
+ + +DC+
Sbjct: 552 LMLLNSYMDCV 562
>Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-24133813
| 20130731
Length = 400
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Query: 60 TDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC 119
D A+ VFD M +D W+ ++ Y++ G ++EAR+LF+ + W ++ ++
Sbjct: 35 VDEAKLVFDNMLYKDSISWNGLLAVYVQNGRLEEARRLFESKVVWELIPWNCLMGRNVKR 94
Query: 120 GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
M+ +AR+ FD + V +W+T++ GY + +A RLF E P R W MM Y
Sbjct: 95 RMLGDARRFFDHMLV-RDVISWNTLIFGYAPNGYLLQARRLFEESPVRDVFRWTTMMFAY 153
Query: 180 G--QNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
G Q Q++ A +LF M P NV SWNT+I + G I F+ M +
Sbjct: 154 GNVQYKQMDMARELFEAM--PCWNVGSWNTMINGYDQKGNIAQVGKLFDMMAQ 204
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N ++ + GR + AR++F+ ++ W+ ++ +K M+ +AR+ FD M RD
Sbjct: 54 NGLLAVYVQNGRLEEARRLFESKVVWELIPWNCLMGRNVKRRMLGDARRFFDHMLVRDVI 113
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGY--VKINQIEEAERLFYEMP 165
W T++ GY G + +AR+LF+ + V W+TM+ Y V+ Q++ A LF MP
Sbjct: 114 SWNTLIFGYAPNGYLLQARRLFE-ESPVRDVFRWTTMMFAYGNVQYKQMDMARELFEAMP 172
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
SWN M+ GY Q G I + LF M +
Sbjct: 173 CWNVGSWNTMINGYDQKGNIAQVGKLFDMMAQ 204
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
+ G D A +VF+ MP +++ ++ + +++C + EA+ +FD M +D+ W +L
Sbjct: 2 RNGHCDLALRVFNAMPYKNLFVFLELNAHWLRC--VDEAKLVFDNMLYKDSISWNGLLAV 59
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
Y++ G ++EAR+LF+ + + W+ ++ VK + +A R F M R +SWN +
Sbjct: 60 YVQNGRLEEARRLFESKVVWELIP-WNCLMGRNVKRRMLGDARRFFDHMLVRDVISWNTL 118
Query: 176 MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL--VRCGRIEDAQWHFNQMQERER 233
+ GY NG + +A LF P R+V W T++ A V+ +++ A+ F M
Sbjct: 119 IFGYAPNGYLLQARRLFEE--SPVRDVFRWTTMMFAYGNVQYKQMDMARELFEAMP--CW 174
Query: 234 DVSSWTTIVD 243
+V SW T+++
Sbjct: 175 NVGSWNTMIN 184
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 122/224 (54%), Gaps = 19/224 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEA 94
++N + + I CKEG+ A+ V M +++++L ++++++GY + +A
Sbjct: 263 NINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKA 322
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ LF+ MA+R D ++ M+NG+ + M+ EA KLF+ ++ +V T++++V+G
Sbjct: 323 KSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDG 382
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K + A L EM +R +++N ++ +N ++KA+ L ++ E + +
Sbjct: 383 LCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPD 442
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+ ++ +I L + GR++DAQ F + + ++ ++T++++
Sbjct: 443 IFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLIN 486
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 123/218 (56%), Gaps = 21/218 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
+S IS C G+ +A +F++M ++ + +I+G+ K G ++EA+ + M +
Sbjct: 237 SSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMK 296
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIE 155
++ +L + ++++GY + +A+ LF+ A++ V+ ++S M+NG+ KI ++
Sbjct: 297 KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN-VMAQRGVTPDVWSYSIMINGFCKIKMVD 355
Query: 156 EAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTII 209
EA +LF EM ++ V++N ++ G ++G+ AL+L M + N++++N+I+
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
A+ + ++ A +++E+ + D+ ++T +++ L
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA 102
CN ++ + G + VF ++ ++ D + +I G G + +A D++
Sbjct: 96 CNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVV 155
Query: 103 ERDTRL----WTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIE 155
+ +L + T++NG G K A +L DG +V +ST+++ K +
Sbjct: 156 AQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVN 215
Query: 156 EAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTII 209
+A L+ EM ++ V+++ ++ G+ G+++ A+DLF RM NV +++ +I
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD--CL 245
+ G++ +A+ M ++ + DV ++ +++D CL
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCL 315
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS + LCK GRT A ++ D+M +R ++ ++++++ K + +A L ++ E
Sbjct: 377 NSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKE 436
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
+ D +T ++NG + G + +A+K+F+ ++ T+++++NG+ +E
Sbjct: 437 KGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDE 496
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ +M + +++ I++ + + +KA L R M
Sbjct: 497 GLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 26/234 (11%)
Query: 22 PLIHGYPFLRTRLASTFSL-NTEMKRC--------------NSFISRLCKEGRTDHARKV 66
P H YPFL ++ + ++ + EM NS + G T+ A KV
Sbjct: 138 PDTHTYPFLLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKV 197
Query: 67 FDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMI 122
F+ M ERD+ W+++ING+ G EA LF +M+ E D ++ + E G +
Sbjct: 198 FELMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGAL 257
Query: 123 KEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
+ R++ ++ +++++ Y K I EA+++F EM ER VSW ++ G
Sbjct: 258 ELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGL 317
Query: 180 GQNGQIEKALDLFRRMPEPERNV---VSWNTIIKALVRCGRIEDAQWHFNQMQE 230
NG E+AL LF+ M E ++ V +++ ++ A CG +++ +F +M+E
Sbjct: 318 AVNGFGEEALGLFKEM-ERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKE 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 46/226 (20%)
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA----RKLFDQMAERDTRLWTTMLNGY 116
+A VF + ++ W+TMI GY + A RK+ E DT + +L
Sbjct: 91 SYAHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAI 150
Query: 117 IECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+ +++ + E + +++++ Y E A ++F M ER V+WN
Sbjct: 151 SKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWN 210
Query: 174 IMMGGYGQNGQIEKALDLFRRMP----EPER-NVVSW----------------------- 205
++ G+ NG+ +AL LFR M EP+ VVS
Sbjct: 211 SVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKV 270
Query: 206 ---------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N+++ +CG I +AQ F++M ER+V SWT++V
Sbjct: 271 GLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMS--ERNVVSWTSLV 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
++ + +++++ Y KCG I+EA+++F +M+ER+ WT+++ G G +EA LF +
Sbjct: 275 NLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEME 334
Query: 134 AEKSVS---TWSTMVNGYVKINQIEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQI 185
+K V T+ ++ ++E F M E + + M+ + G +
Sbjct: 335 RQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLV 394
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRI---EDAQWHFNQMQERE 232
++A + + MP + N V W T++ A G + E A+ H +++ +
Sbjct: 395 KRAYEYIQSMPM-QPNAVIWRTLLGACTVHGDLSLGEIARSHLLKLEPKH 443
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-----KCGMIKEARKLFDQMA 102
N I LCK GR A K+ D+M RD D +I GY+ + G + EAR + ++
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFT-ADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAE 158
+T L+ T++NGY+ G +EA+ L E T++ M++G K + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 159 RLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
EM E +++ I++ G+ + G E+A + M N V +N +I AL
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 213 VRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ G+I+DA + +M + + D+ ++ +++
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK-LFDQMA----ERDTRL 108
LC+ G+ D AR + ++P + L++T+INGY+ G +EA+ L+ M E D
Sbjct: 315 LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374
Query: 109 WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ M++G + G + A + D E +V T++ +++G+ K EEA ++ M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ V +N ++G ++G+I+ AL ++ M + ++ ++N++I L + ++E
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494
Query: 220 DAQWHFNQM 228
+A + M
Sbjct: 495 EALGLYRDM 503
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L + R + A K+ ++M E D++ ++ +I+G K G I EA KL D+M R
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + +++G G + EAR + +V ++T++NGYV + EEA+ L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTV-LYNTLINGYVVSGRFEEAKDLL 359
Query: 162 YEMP-----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
Y+ E ++NIM+ G + G + AL+ M + E NV+++ +I +
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G E+A N M + +S T +CL
Sbjct: 420 QGHFEEASKVVNSMS--AKGLSLNTVGYNCL 448
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL---------WDTMINGYIKCGMIKEARKLF 98
NS I LCK + + A ++ RDM L ++T+I+ +++ +I++A KL
Sbjct: 481 NSLIYGLCKNDKMEEALGLY-----RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 99 DQMAERDTRLWTTMLNGYIEC----GMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
+M R L NG I+ G ++ L + G + S+++ + ++N + +
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSW 205
++ +A + +M +R V++N ++ G + G+ ++AL+LF + + V++
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 206 NTIIKALVRCGRIEDA 221
NT+I G DA
Sbjct: 656 NTLISRYCYEGLFNDA 671
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+ CN I+ C+ G+ + A + M +R D+ ++++ING K G +EA LF
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKI 151
+ + + D + T+++ Y G+ +A +L + + TWS ++N +VK
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKK 700
Query: 152 NQIE 155
+Q E
Sbjct: 701 HQRE 704
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-----KCGMIKEARKLFDQMA 102
N I LCK GR A K+ D+M RD D +I GY+ + G + EAR + ++
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFT-ADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAE 158
+T L+ T++NGY+ G +EA+ L E T++ M++G K + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 159 RLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
EM E +++ I++ G+ + G E+A + M N V +N +I AL
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 213 VRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ G+I+DA + +M + + D+ ++ +++
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK-LFDQMA----ERDTRL 108
LC+ G+ D AR + ++P + L++T+INGY+ G +EA+ L+ M E D
Sbjct: 315 LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374
Query: 109 WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ M++G + G + A + D E +V T++ +++G+ K EEA ++ M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ V +N ++G ++G+I+ AL ++ M + ++ ++N++I L + ++E
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494
Query: 220 DAQWHFNQM 228
+A + M
Sbjct: 495 EALGLYRDM 503
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L + R + A K+ ++M E D++ ++ +I+G K G I EA KL D+M R
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + +++G G + EAR + +V ++T++NGYV + EEA+ L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTV-LYNTLINGYVVSGRFEEAKDLL 359
Query: 162 YEMP-----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
Y+ E ++NIM+ G + G + AL+ M + E NV+++ +I +
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G E+A N M + +S T +CL
Sbjct: 420 QGHFEEASKVVNSMS--AKGLSLNTVGYNCL 448
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL---------WDTMINGYIKCGMIKEARKLF 98
NS I LCK + + A ++ RDM L ++T+I+ +++ +I++A KL
Sbjct: 481 NSLIYGLCKNDKMEEALGLY-----RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 99 DQMAERDTRLWTTMLNGYIEC----GMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
+M R L NG I+ G ++ L + G + S+++ + ++N + +
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSW 205
++ +A + +M +R V++N ++ G + G+ ++AL+LF + + V++
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 206 NTIIKALVRCGRIEDA 221
NT+I G DA
Sbjct: 656 NTLISRYCYEGLFNDA 671
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+ CN I+ C+ G+ + A + M +R D+ ++++ING K G +EA LF
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKI 151
+ + + D + T+++ Y G+ +A +L + + TWS ++N +VK
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKK 700
Query: 152 NQIE 155
+Q E
Sbjct: 701 HQRE 704
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-----KCGMIKEARKLFDQMA 102
N I LCK GR A K+ D+M RD D +I GY+ + G + EAR + ++
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFT-ADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAE 158
+T L+ T++NGY+ G +EA+ L E T++ M++G K + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 159 RLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
EM E +++ I++ G+ + G E+A + M N V +N +I AL
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 213 VRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ G+I+DA + +M + + D+ ++ +++
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK-LFDQMA----ERDTRL 108
LC+ G+ D AR + ++P + L++T+INGY+ G +EA+ L+ M E D
Sbjct: 315 LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374
Query: 109 WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ M++G + G + A + D E +V T++ +++G+ K EEA ++ M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ V +N ++G ++G+I+ AL ++ M + ++ ++N++I L + ++E
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494
Query: 220 DAQWHFNQM 228
+A + M
Sbjct: 495 EALGLYRDM 503
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L + R + A K+ ++M E D++ ++ +I+G K G I EA KL D+M R
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + +++G G + EAR + +V ++T++NGYV + EEA+ L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTV-LYNTLINGYVVSGRFEEAKDLL 359
Query: 162 YEMP-----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
Y+ E ++NIM+ G + G + AL+ M + E NV+++ +I +
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G E+A N M + +S T +CL
Sbjct: 420 QGHFEEASKVVNSMS--AKGLSLNTVGYNCL 448
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL---------WDTMINGYIKCGMIKEARKLF 98
NS I LCK + + A ++ RDM L ++T+I+ +++ +I++A KL
Sbjct: 481 NSLIYGLCKNDKMEEALGLY-----RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 99 DQMAERDTRLWTTMLNGYIEC----GMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
+M R L NG I+ G ++ L + G + S+++ + ++N + +
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSW 205
++ +A + +M +R V++N ++ G + G+ ++AL+LF + + V++
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 206 NTIIKALVRCGRIEDA 221
NT+I G DA
Sbjct: 656 NTLISRYCYEGLFNDA 671
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+ CN I+ C+ G+ + A + M +R D+ ++++ING K G +EA LF
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKI 151
+ + + D + T+++ Y G+ +A +L + + TWS ++N +VK
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKK 700
Query: 152 NQIE 155
+Q E
Sbjct: 701 HQRE 704
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-----KCGMIKEARKLFDQMA 102
N I LCK GR A K+ D+M RD D +I GY+ + G + EAR + ++
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFT-ADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAE 158
+T L+ T++NGY+ G +EA+ L E T++ M++G K + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 159 RLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
EM E +++ I++ G+ + G E+A + M N V +N +I AL
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 213 VRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ G+I+DA + +M + + D+ ++ +++
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK-LFDQMA----ERDTRL 108
LC+ G+ D AR + ++P + L++T+INGY+ G +EA+ L+ M E D
Sbjct: 315 LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374
Query: 109 WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ M++G + G + A + D E +V T++ +++G+ K EEA ++ M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ V +N ++G ++G+I+ AL ++ M + ++ ++N++I L + ++E
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494
Query: 220 DAQWHFNQM 228
+A + M
Sbjct: 495 EALGLYRDM 503
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L + R + A K+ ++M E D++ ++ +I+G K G I EA KL D+M R
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + +++G G + EAR + +V ++T++NGYV + EEA+ L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTV-LYNTLINGYVVSGRFEEAKDLL 359
Query: 162 YEMP-----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
Y+ E ++NIM+ G + G + AL+ M + E NV+++ +I +
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G E+A N M + +S T +CL
Sbjct: 420 QGHFEEASKVVNSMS--AKGLSLNTVGYNCL 448
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL---------WDTMINGYIKCGMIKEARKLF 98
NS I LCK + + A ++ RDM L ++T+I+ +++ +I++A KL
Sbjct: 481 NSLIYGLCKNDKMEEALGLY-----RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 99 DQMAERDTRLWTTMLNGYIEC----GMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
+M R L NG I+ G ++ L + G + S+++ + ++N + +
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSW 205
++ +A + +M +R V++N ++ G + G+ ++AL+LF + + V++
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 206 NTIIKALVRCGRIEDA 221
NT+I G DA
Sbjct: 656 NTLISRYCYEGLFNDA 671
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+ CN I+ C+ G+ + A + M +R D+ ++++ING K G +EA LF
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKI 151
+ + + D + T+++ Y G+ +A +L + + TWS ++N +VK
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKK 700
Query: 152 NQIE 155
+Q E
Sbjct: 701 HQRE 704
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-----KCGMIKEARKLFDQMA 102
N I LCK GR A K+ D+M RD D +I GY+ + G + EAR + ++
Sbjct: 274 NDVIHGLCKAGRIHEAAKLHDRMLLRDFT-ADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQIEEAE 158
+T L+ T++NGY+ G +EA+ L E T++ M++G K + A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 159 RLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
EM E +++ I++ G+ + G E+A + M N V +N +I AL
Sbjct: 393 EFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGAL 452
Query: 213 VRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ G+I+DA + +M + + D+ ++ +++
Sbjct: 453 CKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK-LFDQMA----ERDTRL 108
LC+ G+ D AR + ++P + L++T+INGY+ G +EA+ L+ M E D
Sbjct: 315 LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374
Query: 109 WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ M++G + G + A + D E +V T++ +++G+ K EEA ++ M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ V +N ++G ++G+I+ AL ++ M + ++ ++N++I L + ++E
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494
Query: 220 DAQWHFNQM 228
+A + M
Sbjct: 495 EALGLYRDM 503
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L + R + A K+ ++M E D++ ++ +I+G K G I EA KL D+M R
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + +++G G + EAR + +V ++T++NGYV + EEA+ L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTV-LYNTLINGYVVSGRFEEAKDLL 359
Query: 162 YEMP-----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
Y+ E ++NIM+ G + G + AL+ M + E NV+++ +I +
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G E+A N M + +S T +CL
Sbjct: 420 QGHFEEASKVVNSMS--AKGLSLNTVGYNCL 448
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL---------WDTMINGYIKCGMIKEARKLF 98
NS I LCK + + A ++ RDM L ++T+I+ +++ +I++A KL
Sbjct: 481 NSLIYGLCKNDKMEEALGLY-----RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 99 DQMAERDTRLWTTMLNGYIEC----GMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
+M R L NG I+ G ++ L + G + S+++ + ++N + +
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSW 205
++ +A + +M +R V++N ++ G + G+ ++AL+LF + + V++
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 206 NTIIKALVRCGRIEDA 221
NT+I G DA
Sbjct: 656 NTLISRYCYEGLFNDA 671
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+ CN I+ C+ G+ + A + M +R D+ ++++ING K G +EA LF
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKI 151
+ + + D + T+++ Y G+ +A +L + + TWS ++N +VK
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKK 700
Query: 152 NQIE 155
+Q E
Sbjct: 701 HQRE 704
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 40/219 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ ++ K + A ++F +MP+R W+T+++ Y K G I+ AR+LFD + E D+
Sbjct: 49 NNLLNFYSKTASFNDAHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSV 108
Query: 108 LWTTMLNGYIECGMIKEARKLF-----DGP--------------------DAEKSVSTW- 141
WTTM+ GY + G A F DG D K V ++
Sbjct: 109 SWTTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFV 168
Query: 142 ------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
++++N YVK + +F M R +WNIM+ + Q+G+ + AL
Sbjct: 169 VKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVAL 228
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
LF +M +R+++SWN+II G A F+ M
Sbjct: 229 ALFDQM--TDRDIISWNSIIAGYCHQGYDSKALETFSDM 265
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 112/276 (40%), Gaps = 79/276 (28%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N IS + GR D A +FDQM +RD+ W+++I GY G +A + F M
Sbjct: 212 NIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSL 271
Query: 102 --------------------------------AERDTR--LWTTMLNGYIECGMIKEARK 127
A+ D + +++ Y + G ++ AR
Sbjct: 272 KPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVART 331
Query: 128 LFD-GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
+ + + +V +++++NGYVKI + A +F + R V+W M+ GY QN ++
Sbjct: 332 IVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLK 391
Query: 187 KALDLFRRM----PEPE---------------------------------RNVVSWNTII 209
AL+LFR M P P +V N +I
Sbjct: 392 DALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALI 451
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
+ G I+DA+ FNQ+ ERD +WT+++ L
Sbjct: 452 TMYSKSGCIKDARKVFNQICT-ERDTLTWTSMIIAL 486
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
NS ++ K G + + VFD+M RD W+ MI+ +++ G A LFDQM +RD
Sbjct: 180 ANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDI 239
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLF- 161
W +++ GY G +A + F S+ T ++++ + ++ +++
Sbjct: 240 ISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHA 299
Query: 162 YEMPERKDVS---WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
Y + D+S N ++ Y ++G +E A + NV+++ +++ V+ G +
Sbjct: 300 YIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDV 359
Query: 219 EDAQWHFNQMQERERDVSSWTTIV 242
A+ F+ + + RDV +WT ++
Sbjct: 360 NPAREIFDSL--KCRDVVAWTAMI 381
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 45/230 (19%)
Query: 52 SRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTT 111
SR GR HAR + + L + ++N Y K +A +LF +M +R T W T
Sbjct: 23 SRDTVTGRFIHAR-IIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEMPQRTTFSWNT 81
Query: 112 MLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE----- 166
+L+ Y + G I+ AR+LFD SVS W+TM+ GY ++ + A F +M
Sbjct: 82 LLSSYAKGGNIETARRLFDDIPEPDSVS-WTTMIVGYNQMGRFNTAIHTFQQMISDGILP 140
Query: 167 ---------------------RKDVSW-------------NIMMGGYGQNGQIEKALDLF 192
+K S+ N ++ Y ++G + +F
Sbjct: 141 TQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVF 200
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
RM +++ +WN +I ++ GR + A F+QM +RD+ SW +I+
Sbjct: 201 DRMRLRDKS--TWNIMISMHMQSGRFDVALALFDQMT--DRDIISWNSII 246
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
N + S ++ K G + AR++FD + RD+ W MI GY + ++K+A +LF
Sbjct: 340 NINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRL 399
Query: 101 MAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQ 153
M R +L+ + + ++L K SVS + ++ Y K
Sbjct: 400 MISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYSKSGC 459
Query: 154 IEEAERLFYEM-PERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTI 208
I++A ++F ++ ER ++W M+ Q+G +A++LF M +P+ +++ +
Sbjct: 460 IKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDH--ITYVGV 517
Query: 209 IKALVRCGRIEDAQWHFNQMQ 229
+ A G +E + +FN M+
Sbjct: 518 LSACTHVGLVEQGKRYFNLMK 538
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
N+ I+ K G ARKVF+Q+ ERD W +MI + G+ EA +LF+ M + +
Sbjct: 448 NALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNL 507
Query: 107 R----LWTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ + +L+ G++++ ++ F + E + S ++ M++ + + IEEA
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAY 567
Query: 159 RLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEP-----ERNVVSWNTIIKAL 212
MP D ++W ++ ++ K +DL + E N +++ +
Sbjct: 568 NFIKTMPIEPDGIAWGSLLSA----CRVHKNVDLAKVAAEKLLLIDPNNSGAYSALANTH 623
Query: 213 VRCGRIEDAQWHFNQMQERE 232
CG E+A M++RE
Sbjct: 624 SACGEWEEAAKVRKLMRDRE 643
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAE 135
+++I+ Y KCG +K A+ +FD M+ERD W +++ GY + G +A +LF D+
Sbjct: 393 NSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSP 452
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEM-----PERKDVSWNIMMGGYGQNGQIEKALD 190
++ TW+ M+ GY++ ++A LF + +R SWN ++ G+ Q+GQ +KAL
Sbjct: 453 PNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQ 512
Query: 191 LFRRM 195
+FR M
Sbjct: 513 IFRNM 517
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 82/278 (29%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS ++ K G D A+K+FD M ERD W+ MI+G+ + G I +A+K FD M +
Sbjct: 222 NSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVE 281
Query: 105 ------------------------------------DTRLWTTMLNGYIECGMIKEARKL 128
D WT+M++G+ + G I A L
Sbjct: 282 PSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDL 341
Query: 129 FD-----GPDAE--------------KSVS-------------------TWSTMVNGYVK 150
G +A KS+S +++++ Y K
Sbjct: 342 LKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCK 401
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTI 208
++ A+ +F M ER SWN ++GGY Q G KA +LF +M E + N+++WN +
Sbjct: 402 CGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIM 461
Query: 209 IKALVRCGRIEDAQWHFNQMQ---ERERDVSSWTTIVD 243
I ++ G + A F ++ + +R+ +SW +++
Sbjct: 462 ITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLIS 499
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 110/232 (47%), Gaps = 51/232 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS I CK G A+ +FD M ERD+ W+++I GY + G +A +LF +M E D+
Sbjct: 393 NSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSP 452
Query: 108 ----LWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
W M+ GY++ G +A LF DG +++ ++W+++++G+V+ Q ++A
Sbjct: 453 PNIITWNIMITGYMQSGAEDQALDLFKSIEKDGK-TKRNAASWNSLISGFVQSGQKDKAL 511
Query: 159 RLFYEM-------------------------PERKDVSW--------------NIMMGGY 179
++F M + K++ N+++ Y
Sbjct: 512 QIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSY 571
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
++G + + ++F + ++ VSWN+++ + V G E A F QM+++
Sbjct: 572 AKSGNLMYSKNIFNELSW--KDAVSWNSMLSSYVLHGCSESALDLFYQMRKQ 621
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-------KCGM 90
F + ++ S IS ++GR HA + +M + + I M
Sbjct: 313 FGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSM 372
Query: 91 IKEARKLFDQMAERDTRL-WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYV 149
E + +M D L ++++ Y +CG +K A+ +FD +E+ V +W++++ GY
Sbjct: 373 GLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMM-SERDVYSWNSIIGGYF 431
Query: 150 KINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPE---PERNV 202
+ +A LF +M E ++WNIM+ GY Q+G ++ALDLF+ + + +RN
Sbjct: 432 QAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNA 491
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQ 229
SWN++I V+ G+ + A F MQ
Sbjct: 492 ASWNSLISGFVQSGQKDKALQIFRNMQ 518
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 62/239 (25%)
Query: 28 PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK 87
PF+ T+L S ++ K G ARKVF++M R++ W MI G +
Sbjct: 117 PFVETKLVSMYA----------------KCGLLGMARKVFNEMSVRNLFTWSAMIGGCSR 160
Query: 88 --------------------------------CGMIK--EARKLFDQMAERDTRLWT--- 110
CG + E +L M R W+
Sbjct: 161 NKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHL 220
Query: 111 --TMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP--- 165
+++ Y +CG + A+K+FD D SV+ W+ M++G+ + +I +A++ F M
Sbjct: 221 RNSIMAVYAKCGEMDCAKKIFDCMDERDSVA-WNAMISGFCQNGEIGQAQKYFDAMQKDG 279
Query: 166 -ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDA 221
E V+WNI++ Y Q G + A+DL R+M +V +W ++I + GRI A
Sbjct: 280 VEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHA 338
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAE 135
+++ Y KCG++ ARK+F++M+ R+ W+ M+ G E LF DG +
Sbjct: 123 LVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPD 182
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW-----NIMMGGYGQNGQIEKALD 190
+ + ++ K +E RL + M R+ + W N +M Y + G+++ A
Sbjct: 183 EFL--LPKVLQACGKCRDLETG-RLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKK 239
Query: 191 LFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDC 244
+F M ER+ V+WN +I + G I AQ +F+ MQ+ E + +W ++ C
Sbjct: 240 IFDCM--DERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISC 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 34/177 (19%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L +E+ N I K G +++ +F+++ +D W++M++ Y+ G + A LF
Sbjct: 557 LVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFY 616
Query: 100 QMAERDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
QM ++ + + ++L Y GM+ E + +F S + Y+ +E
Sbjct: 617 QMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVF------------SCITKDYLVRQGME 664
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTIIKA 211
+ Y + G++G++ +ALD + MP EP +V W ++ A
Sbjct: 665 HYSAMVYLL---------------GRSGKLAEALDFIQSMPIEPNSSV--WGALLTA 704
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 117/223 (52%), Gaps = 19/223 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEA 94
++N M + + CKEG+ A+ + ++D+ L ++++++GY I +A
Sbjct: 275 NINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKA 334
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +FD MA R + + +TTM+NG + M+ EA LF+ K +V T++++++G
Sbjct: 335 KDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDG 394
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K+ +I +L EM +R +++N ++ +N ++KA+ L + + +
Sbjct: 395 LGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPD 454
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+ ++ +IK L + G++EDAQ F + + DV ++T ++
Sbjct: 455 MYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMI 497
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 19/218 (8%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQMA 102
CNS I C G+ A + +M + M + +++ + K G +KEA+ +
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307
Query: 103 ERDTRL----WTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIE 155
++D L + ++++GY I +A+ +FD + +V +++TM+NG KI ++
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367
Query: 156 EAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTII 209
EA LF EM RK V++N ++ G G+ G+I L L M + + N++++N+I+
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSIL 427
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
AL + ++ A ++++ D+ ++T ++ L
Sbjct: 428 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGL 465
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 54/278 (19%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
IL H + H L++ + + F TE N+ I K G +A KVF++M
Sbjct: 124 ILCHRLGMQVHGLVY-------KFGADFHCITE----NALIDMYTKFGDLTNACKVFEEM 172
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD 130
RD+ W+++I GY+K G + AR+LFD M R WTTM+ GY G +A +F
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 131 -------GPD--------------AEKSVSTW-----------------STMVNGYVKIN 152
PD V W + ++ Y K
Sbjct: 233 EMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCG 292
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
I+EA LF ++ E+ +SW+ M+GG +G+ +A+ LF M + N +++ ++
Sbjct: 293 CIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLL 352
Query: 211 ALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
A G ++ +F+ M E ++ + ++D L
Sbjct: 353 ACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLL 390
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 54/278 (19%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
IL H + H L++ + + F TE N+ I K G +A KVF++M
Sbjct: 124 ILCHRLGMQVHGLVY-------KFGADFHCITE----NALIDMYTKFGDLTNACKVFEEM 172
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD 130
RD+ W+++I GY+K G + AR+LFD M R WTTM+ GY G +A +F
Sbjct: 173 SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFR 232
Query: 131 -------GPD--------------AEKSVSTW-----------------STMVNGYVKIN 152
PD V W + ++ Y K
Sbjct: 233 EMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCG 292
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
I+EA LF ++ E+ +SW+ M+GG +G+ +A+ LF M + N +++ ++
Sbjct: 293 CIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLL 352
Query: 211 ALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
A G ++ +F+ M E ++ + ++D L
Sbjct: 353 ACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLL 390
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 35 ASTFSLNTEMKRC--NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIK 92
A +F L C N+ ++ G AR+VFD + ER + W++MINGY K G +
Sbjct: 158 AQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSE 217
Query: 93 EARKLFDQMAERDTR---------LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST 143
EA +F +M E L + +G + G + G + + V+ +
Sbjct: 218 EAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVT--NA 275
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV 203
+++ Y K ++ A+ +F +M ++ VSW M+ Y +G I+ AL+ F +M P +NVV
Sbjct: 276 LMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQM--PGKNVV 333
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQM 228
SWN+II V+ G +A F +M
Sbjct: 334 SWNSIIWCHVQEGLYAEAVDLFYRM 358
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 47/243 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + K G A+ VFDQM ++D+ W MIN Y G+I A + F+QM ++
Sbjct: 274 NALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVV 333
Query: 108 LWTTMLNGYIECGMIKEARKLFD-----------------------------GPDAEK-- 136
W +++ +++ G+ EA LF G A
Sbjct: 334 SWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYI 393
Query: 137 -------SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
S + + +++ Y K ++ A +F+ MPE+ VSWN+++G +G ++A+
Sbjct: 394 FDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAI 453
Query: 190 DLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIV 242
++F +M P+ +++ ++ A G ++ Q +F M DV + +V
Sbjct: 454 EMFEKMQASGVCPDE--ITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMV 511
Query: 243 DCL 245
D L
Sbjct: 512 DLL 514
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 46/217 (21%)
Query: 56 KEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTT 111
K G D R V M E D + + +++ Y KCG +K A+ +FDQM ++D WT
Sbjct: 247 KHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTC 306
Query: 112 MLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
M+N Y G+I A + F+ K+V +W++++ +V+ EA LFY M + ++
Sbjct: 307 MINAYANHGLIDCALEFFNQMPG-KNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMA 365
Query: 172 ---------------------------------------WNIMMGGYGQNGQIEKALDLF 192
N ++ Y + G ++ A+D+F
Sbjct: 366 NDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVF 425
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
M PE+N VSWN II AL G ++A F +MQ
Sbjct: 426 FGM--PEKNAVSWNVIIGALALHGYGKEAIEMFEKMQ 460
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYI-----KCGMIKEARKL 97
+++ N I LCK GR A K+ D+M RD D +I GY+ + G + EAR +
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFT-ADALIQGYLMHGLCRMGKVDEARAM 327
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQ 153
++ +T L+ T++NGY+ G +EA+ L E T++ M++G K
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 154 IEEAERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNT 207
+ A EM E +++ I++ G+ + G E+A + M N V +N
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447
Query: 208 IIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+I AL + G+I+DA + +M + + D+ ++ +++
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLI 484
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARK-LFDQMA----ERDTRL 108
LC+ G+ D AR + ++P + L++T+INGY+ G +EA+ L+ M E D
Sbjct: 315 LCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFT 374
Query: 109 WTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
+ M++G + G + A + D E +V T++ +++G+ K EEA ++ M
Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434
Query: 166 ER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
+ V +N ++G ++G+I+ AL ++ M + ++ ++N++I L + ++E
Sbjct: 435 AKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKME 494
Query: 220 DAQWHFNQM 228
+A + M
Sbjct: 495 EALGLYRDM 503
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I L + R + A K+ ++M E D++ ++ +I+G K G I EA KL D+M R
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + +++G G + EAR + +V ++T++NGYV + EEA+ L
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTV-LYNTLINGYVVSGRFEEAKDLL 359
Query: 162 YEMP-----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
Y+ E ++NIM+ G + G + AL+ M + E NV+++ +I +
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
G E+A N M + +S T +CL
Sbjct: 420 QGHFEEASKVVNSMS--AKGLSLNTVGYNCL 448
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL---------WDTMINGYIKCGMIKEARKLF 98
NS I LCK + + A ++ RDM L ++T+I+ +++ +I++A KL
Sbjct: 481 NSLIYGLCKNDKMEEALGLY-----RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 99 DQMAERDTRLWTTMLNGYIEC----GMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKI 151
+M R L NG I+ G ++ L + G + S+++ + ++N + +
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSW 205
++ +A + +M +R V++N ++ G + G+ ++AL+LF + + V++
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 206 NTIIKALVRCGRIEDA 221
NT+I G DA
Sbjct: 656 NTLISRYCYEGLFNDA 671
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 21/149 (14%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+ CN I+ C+ G+ + A + M +R D+ ++++ING K G +EA LF
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKI 151
+ + + D + T+++ Y G+ +A +L + + TWS ++N +VK
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKK 700
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYG 180
+Q + ++ + I+MG +G
Sbjct: 701 HQRDNSD----------SEQFTILMGNWG 719
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 47/245 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS IS G + +ARKVFD+M RD+ W++M+ GY++ G ++ A LF +M R+
Sbjct: 168 NSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNII 227
Query: 108 LWTTMLNGYIECGMIKEARKLF------DGPDAEK------------------------- 136
W +++ G ++ G KE+ ++F G D K
Sbjct: 228 TWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWV 287
Query: 137 -----------SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
V + +VN Y K +++A +F +MPE+ +W M+ + +G
Sbjct: 288 HAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFG 347
Query: 186 EKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ---ERERDVSSWTT 240
+KA D F M + + N V++ ++ A G +E + F+ M+ E + +
Sbjct: 348 KKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYAC 407
Query: 241 IVDCL 245
+VD L
Sbjct: 408 MVDIL 412
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 96/182 (52%), Gaps = 17/182 (9%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ + +++I+ ++ G+ K ARK+FD+M RD W +M+ GY+ G ++ A LF +
Sbjct: 163 DVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMN 222
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEM----------PERKDVSWNIMMGGYGQNG 183
+++ TW++++ G V+ +E+ +F+EM P++ ++ ++ G
Sbjct: 223 G-RNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIAS--VLSACALLG 279
Query: 184 QIE--KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
I+ K + + R + E +VV ++ +CG ++ A FN M E+D S+WT +
Sbjct: 280 SIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMP--EKDASAWTAM 337
Query: 242 VD 243
+
Sbjct: 338 IS 339
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 15/207 (7%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLW 109
IS K G + AR +F ++ D+ ++ MI+G+ G + + KLF ++ R+
Sbjct: 250 LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVS 309
Query: 110 TTMLNGYIEC----GMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
++ + G I G + A + G +VST T + Y K+N+I+ A L
Sbjct: 310 SSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAI--YNKLNEIDLARHL 367
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRI 218
F E PE+ V+WN M+ GY QNG E A+ LF+ M + E N V+ TI+ A + G +
Sbjct: 368 FDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL 427
Query: 219 EDAQW--HFNQMQERERDVSSWTTIVD 243
+W H + + E ++ T +VD
Sbjct: 428 SFGKWVHHLIKSENLEPNIYVSTALVD 454
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER---- 104
+F + K D AR +FD+ PE+ + W+ MI+GY + G + A LF +M +
Sbjct: 350 AFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTP 409
Query: 105 DTRLWTTMLNGYIECGMI---KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
+ TT+L+ + G + K L + E ++ + +V+ Y K I EA +LF
Sbjct: 410 NAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLF 469
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIKALVRCGRIE 219
M E+ V+WN M+ GYG +G +AL L+ M N V++ +++ A G +
Sbjct: 470 DSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVG 529
Query: 220 DAQWHFNQMQERERD---VSSWTTIVDCL 245
+ + F+ M + R + + +VD L
Sbjct: 530 EGEEIFHNMVNKYRIEPLIEHYACMVDIL 558
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 14 HAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER 73
H L+ H +I GY + + ++ + CK R +ARKVFD MPER
Sbjct: 126 HLMLLHAHSIIDGY-------------GSNVFVGSALVDLYCKFSRVVYARKVFDGMPER 172
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY---------IECGMIKE 124
D LW+TMING +K ++ +LF +M R+ ++ + ++ GM +
Sbjct: 173 DTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQ 232
Query: 125 ARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
L G V T +++ Y K + A LF + +++N M+ G+ NG
Sbjct: 233 CLALKIGFGFCDYVLTG--LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGG 290
Query: 185 IEKALDLFRRMP-EPERNVVSWNTII 209
E ++ LFR + ER VS +TI+
Sbjct: 291 TECSVKLFRELLFSGER--VSSSTIV 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD- 130
E ++ + +++ Y KCG I EA +LFD M+E++T W TM+ GY G EA KL++
Sbjct: 443 EPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNE 502
Query: 131 --GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNG 183
S T+ +++ + E E +F+ M + + + M+ G++G
Sbjct: 503 MLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSG 562
Query: 184 QIEKALDLFRRMP-EPERNVVSWNTIIKA 211
Q+EKAL+ ++MP EP V W T++ A
Sbjct: 563 QLEKALEFIKKMPVEPGPAV--WGTLLGA 589
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS ++ L ++G A K+FD+MP+RD+ W +MI GY++ G +++ + F M E+ R
Sbjct: 184 NSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIR 243
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERL 160
+ TML+ + G++ R + ++ + SV+ + +V+ Y K IEE+ L
Sbjct: 244 PNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDL 303
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR-MPEPERNV-VSWNTIIKALVRCGRI 218
F M ER +W +M+ G + + ++AL LFR + E R V V + ++ A R G +
Sbjct: 304 FDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLV 363
Query: 219 EDAQWHFNQM 228
+ +++F M
Sbjct: 364 SEGRYYFKLM 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 42/172 (24%)
Query: 111 TMLNGYIECGMIKE-ARKLFDGPDAE--KSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
+++ Y E + E A+++F+ E V TW++M+ G V+ ++ +AE++F EMP+R
Sbjct: 150 ALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKR 209
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPE-----------------PERNVVSWNTIIK 210
VSW+ M+ GY QNG++E L+ FR M E + ++ W +
Sbjct: 210 DVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVH 269
Query: 211 ALV--------------------RCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + +CG IE+++ F+ M ERD+ +WT ++
Sbjct: 270 STIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMM--ERDIWTWTVMI 319
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 9/148 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+ K G + +R +FD M ERD+ W MI G KEA LF + R
Sbjct: 285 TGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFR 344
Query: 108 ----LWTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
++ +LN G++ E R F DG + + MV+ + + I+EA R
Sbjct: 345 PVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVR 404
Query: 160 LFYEMPERKD-VSWNIMMGGYGQNGQIE 186
L M D V W ++ +G +E
Sbjct: 405 LIETMTVEPDPVMWATLLDACEIHGFVE 432
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 76/290 (26%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCK---------------EGRTDH 62
L H L H RL L++++ N+ I+ K E D
Sbjct: 123 LKHHKLAHSLHACTVRLG----LDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDC 178
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTMLNGYI 117
+KVFD MP RD+ W+T+I G+ + GM EA + +M + D+ +++L +
Sbjct: 179 VKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFA 238
Query: 118 ECGMIKEARKL--------FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD 169
E + + +++ FDG V S++++ Y K N++E + R FY +P +
Sbjct: 239 EHVDVNKGKEIHGYAVRNGFDG-----DVFIGSSLIDMYAKCNRLECSLRAFYILPRKDA 293
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIKA---------------- 211
+SWN ++ G QNG+ ++ L FRRM + VS++++I A
Sbjct: 294 ISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGC 353
Query: 212 -------------------LVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+CG I+ A++ F+++ +RD+ +WT I+
Sbjct: 354 IVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID--KRDMVAWTAII 401
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 30/249 (12%)
Query: 4 KLPPLSF-------ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCK 56
KL P SF I +N IHGY A + ++ +S I K
Sbjct: 222 KLKPDSFTLSSILPIFAEHVDVNKGKEIHGY-------AVRNGFDGDVFIGSSLIDMYAK 274
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY 116
R + + + F +P +D W+++I G ++ G F +M + + + +
Sbjct: 275 CNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSV 334
Query: 117 I-ECGMIKE---ARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
I C + R+L G D + ++ S++V+ Y K I+ A +F + +R
Sbjct: 335 IPACAHLTALSLGRQLHGCIVRLGFDDNEFIA--SSLVDMYAKCGNIKMARYVFDRIDKR 392
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIKALVRCGRIEDAQWHF 225
V+W ++ G +G A+ LF M E V++ ++ A G +++ +F
Sbjct: 393 DMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYF 452
Query: 226 NQMQERERD 234
N M ERD
Sbjct: 453 NSM---ERD 458
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 112/237 (47%), Gaps = 16/237 (6%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
LN IHG L S + E+ N+ + K A+++FD++PE+D+
Sbjct: 223 LNLGKGIHG-------LVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVS 275
Query: 78 WDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
W +MI+G ++ +E+ LF +M E D + T++L+ G++ R + + D
Sbjct: 276 WTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYID 335
Query: 134 AEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALD 190
+ V +++++ Y K IE A+++F +P + +WN +GG NG ++AL
Sbjct: 336 HSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALK 395
Query: 191 LFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
F + E N +++ + A G +++ + +F QM ++S W C+
Sbjct: 396 QFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCM 452
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 110/221 (49%), Gaps = 14/221 (6%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
LA L +M NSF+ G T A KVFD MP RD+ W +I+GY+K G+ +
Sbjct: 134 LAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFND 193
Query: 94 ARKLFDQM-AERDTRLWTTMLNGYIECGMI---KEARKLFDGPDAEKSVSTWSTMVNGYV 149
A LF +M + + ++L + G + K L K + +T+++ YV
Sbjct: 194 AVALFLRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYV 253
Query: 150 KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSW 205
K + +A+RLF E+PE+ VSW M+ G Q +++LDLF M EP+ +++
Sbjct: 254 KCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILT- 312
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVD 243
+++ A G ++ +W ++ + R DV T+++D
Sbjct: 313 -SVLSACASLGLLDYGRW-VHEYIDHSRIKWDVHIGTSLID 351
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 111/272 (40%), Gaps = 45/272 (16%)
Query: 1 MAKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT 60
+ + P+SF L +P + L L F ++ N+ I K G
Sbjct: 104 LNNNVSPVSFTFSALFSLLKNPSLGSQLHLHAFL---FGFVNDLYVGNTIIHMYVKFGVL 160
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECG 120
D ARKVFD+MP RD+ W +I Y + G + A +LF + +D WT+M+ GY +
Sbjct: 161 DCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNA 220
Query: 121 MIKEARKLFD------------------GPDAEKSVSTW--------------------- 141
M K+A + F A+ VS +
Sbjct: 221 MPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFV 280
Query: 142 -STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP-- 198
S +++ Y K +EEA +F M E S++ M+ G+ +G+ A+ LF M E
Sbjct: 281 GSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGI 340
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+ N V++ + A G +E Q F M+E
Sbjct: 341 KPNHVTFVGLFTACSHAGMVEQGQQLFGAMKE 372
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM---PERDMRLWDTMINGY 85
F + R A + + S ++L G D R++ + ++ + +I+ Y
Sbjct: 229 FRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMY 288
Query: 86 IKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVST 140
KCG ++EA +F M E + +++M+ G+ G + A KLF +G + + T
Sbjct: 289 SKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENG--IKPNHVT 346
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRM 195
+ + +E+ ++LF M E VS + M G+ G +EKAL L + M
Sbjct: 347 FVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTM 406
Query: 196 P-EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
P EP V W ++ A G + A+ + E E D
Sbjct: 407 PMEPNGGV--WGALLGASHIHGNPDVAEIASRSLFELEPD 444
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 47/230 (20%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
A +VF +MP+R+ W+ I+G IK G ++ AR +FD+M R WT +++GY
Sbjct: 168 AAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKP 227
Query: 123 KEARKLF------DG--PDAEKSVSTWSTM-----------VNGYV-------------- 149
+A LF DG P+ ++ + + V+GYV
Sbjct: 228 LKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVN 287
Query: 150 -------KINQIEEAERLFYEMPE--RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP-- 198
K IE A LF EMP+ R VSWN +M GY G + +A+D F +M +
Sbjct: 288 ALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGV 347
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
N V++ +I+ A G +E+ F +M D+ + ++D L
Sbjct: 348 RPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDML 397
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 57/235 (24%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
+CK G +H VF Q +++ Y G + +A ++F +M +R+T W +
Sbjct: 140 VCKMGFENH---VFVQ---------TGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFI 187
Query: 114 NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-- 171
+G I+ G ++ AR +FD +SV +W+ +++GY ++N+ +A LF +M E +
Sbjct: 188 SGLIKWGQLEFARSVFD-RMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPN 246
Query: 172 ---------------------------------------WNIMMGGYGQNGQIEKALDLF 192
N ++ Y + G IE A LF
Sbjct: 247 EVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLF 306
Query: 193 RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE---RERDVSSWTTIVDC 244
MP+ RN VSWN+++ G + +A F +M++ R V+ + + C
Sbjct: 307 SEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSAC 361
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 128/233 (54%), Gaps = 21/233 (9%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKC 88
R+ S+ ++ + I LCK+ A +++ +M E+ ++ + T+I G+
Sbjct: 191 RMIEGLSVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIV 250
Query: 89 GMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTW 141
G +K+A +LF++M + D + +++G + G +++AR L + +V T+
Sbjct: 251 GQLKDAVRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTY 310
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMP 196
S++++GY ++N++ +A+ +F E+ R VS +NIM+ G + +++A++LF++M
Sbjct: 311 SSLMDGYFQVNEVNKAKDVF-EIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMH 369
Query: 197 --EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
N V++N++I L + GRI ++M +R + +V ++T+++D L
Sbjct: 370 LRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDAL 422
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQM--- 101
+ I+ LC G A +D + ++ +L + +ING K G K A L +
Sbjct: 137 TLINGLCLNGEVKKAFHFYDDVIAKEFQLNQFSYGILINGLCKSGETKAALSLLRMIEGL 196
Query: 102 -AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEA 157
+ D ++TT+++ + ++ +A +L+ +K +V T+ST++ G+ + Q+++A
Sbjct: 197 SVKPDVVMYTTIIDSLCKDKLVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDA 256
Query: 158 ERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
RLF EM + DV ++NI++ G +NG++ KA +L M + + NVV++++++
Sbjct: 257 VRLFNEMMLKNIDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMDG 316
Query: 212 LVRCGRIEDAQWHFNQMQE--RERDVSSWTTIVDCL 245
+ + A+ F M ++ S+ ++D L
Sbjct: 317 YFQVNEVNKAKDVFEIMVRWGVSPNIHSYNIMIDGL 352
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
NS I LCK GR + + D+M +R ++ + ++++ K + +A LF +M
Sbjct: 381 NSLIYGLCKSGRISYVLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKD 440
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQI 154
E + + +++ + G I +A L D G A +V T++++++G K + +
Sbjct: 441 LGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRGQPA--NVVTYTSLIDGLCKNHNL 498
Query: 155 EEAERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTI 208
++A F ++ + + DV ++ +++ G + G+++ AL++FR + +V+++ +
Sbjct: 499 DKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVFRILLIKGYHLDVLTYTVM 558
Query: 209 IKALVRCGRIEDAQWHFNQMQER 231
I L + G ++ ++M+E
Sbjct: 559 ISGLCKEGLFDEVLTLLSKMEEN 581
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 60/298 (20%)
Query: 8 LSFILMHAHKLNTHPLIHGYPFLRTRLASTFSL------------NTEMKRCNSFISRLC 55
L F+ N P H + L S SL ++++ +S I+
Sbjct: 72 LFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLSMKLGNSSDVYFVSSVINAFS 131
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K AR+VFD+ R++ W ++++GY CG++ EAR +FD+M R+ ++ M++G
Sbjct: 132 KHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSG 191
Query: 116 YIECGMIKEARKLF-------DGPDAEK-------SVSTWSTMV---------------N 146
Y+ G E +LF G K SV TMV N
Sbjct: 192 YVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEEN 251
Query: 147 G--------------YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
G Y+K ++ AE++F +MP + +W+ M+ G NG + AL+LF
Sbjct: 252 GLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELF 311
Query: 193 RRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
+M + P+ N V++ ++ A ++ F M E+ + + +VD L
Sbjct: 312 EKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVL 369
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 126/251 (50%), Gaps = 29/251 (11%)
Query: 23 LIHGYPFLRTRLASTFSL---------NTEMKRCNSFISRLCKEGRTDHARKVFDQM--- 70
LIHG+ + +L F L N ++ N+ + L KEG+ A+ + M
Sbjct: 239 LIHGFCIV-GQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKE 297
Query: 71 -PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEA 125
E ++ + +++GY + +A+ +F+ M +R D + +T M+NG + M+ EA
Sbjct: 298 GVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEA 357
Query: 126 RKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD----VSWNIMMGG 178
LF+ + V T+S+++NG K ++ A +LF EM +R +++N ++
Sbjct: 358 VSLFEEMHSTNMTLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDA 417
Query: 179 YGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQM--QERERD 234
++ Q +KA+ L +M + + ++ ++N +I L + GR++DAQ F + + D
Sbjct: 418 LCKSHQTDKAIALLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVD 477
Query: 235 VSSWTTIVDCL 245
V ++ +++ L
Sbjct: 478 VVTYNVMINGL 488
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 115/214 (53%), Gaps = 19/214 (8%)
Query: 51 ISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER-- 104
I LCK+ + A ++ +M + D+ + ++I+G+ G +KE L ++M +
Sbjct: 205 IDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTSLIHGFCIVGQLKEVFVLLNEMVLKNI 264
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAER 159
D + T+++ + G +KEA+ L E ++ T+S +++GY +N++ +A+
Sbjct: 265 NPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEVNKAKD 324
Query: 160 LFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALV 213
+F M +R D+ S+ IM+ G + +++A+ LF M +V++++++I L
Sbjct: 325 IFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLC 384
Query: 214 RCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
+ GR+ A F++M +R + DV ++ +++D L
Sbjct: 385 KSGRLISAWKLFDEMLDRGQPPDVITYNSLLDAL 418
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 105/198 (53%), Gaps = 25/198 (12%)
Query: 55 CKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-- 108
C + A+ +F+ M +R D++ + MING K M+ EA LF++M + L
Sbjct: 314 CLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDV 373
Query: 109 --WTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+++++NG + G + A KLFD PD V T++++++ K +Q ++A
Sbjct: 374 ITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPD----VITYNSLLDALCKSHQTDKAIA 429
Query: 160 LFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIKALV 213
L +M ++ D+ ++NI++ G ++G+++ A +FR + N VV++N +I L
Sbjct: 430 LLSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLC 489
Query: 214 RCGRIEDAQWHFNQMQER 231
+ +++A ++M+ +
Sbjct: 490 KESLLDEALTLLSKMEAK 507
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF----D 99
+S I+ LCK GR A K+FD+M +R D+ ++++++ K +A L D
Sbjct: 377 SSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKD 436
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
Q + D + +++G + G + +A+K+F V T++ M+NG K + ++E
Sbjct: 437 QGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDE 496
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
A L +M + +++ I++ G +KA L R M
Sbjct: 497 ALTLLSKMEAKGCIPDAITYEIIIRALFGKGVNDKAEKLLREM 539
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 118/217 (54%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S I +CK+ + A ++ +M + ++ + +I+G+ G +K+A LF++M
Sbjct: 158 SSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMIL 217
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ ++ +++G+ + G +KEA+ + + V T+S++++GY +N++ +
Sbjct: 218 ENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNK 277
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
AE +F M R S++IM+ G+ + +++A+ LF+ M + +V++++ +I
Sbjct: 278 AESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALID 337
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + GRI A ++M +R + D+ ++ +I+D L
Sbjct: 338 GLCKSGRISYALELVDEMHDRGQQPDIITYNSILDAL 374
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N + + + CKEGR A+ V M ++ D+ + ++++GY + +A
Sbjct: 219 NINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKA 278
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+F+ M+ R + + ++ M+NG+ + M+ EA KLF ++ V T+S +++G
Sbjct: 279 ESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDG 338
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMP----EPE 199
K +I A L EM +R +++N ++ + ++KA+ L ++ P+
Sbjct: 339 LCKSGRISYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPD 398
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
N ++ ++K L R G++EDA+ F + + DV ++T ++
Sbjct: 399 MN--TYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 441
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 115/214 (53%), Gaps = 19/214 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS C G+ A +F++M ++ + +++G+ K G +KEA+ + M +
Sbjct: 193 SALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMK 252
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEE 156
+ D ++++++GY + +A +F+ +V ++S M+NG+ KI ++E
Sbjct: 253 QGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDE 312
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
A +LF EM ++ ++++ ++ G ++G+I AL+L M + + +++++N+I+
Sbjct: 313 AMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILD 372
Query: 211 ALVRCGRIEDAQWHFNQM--QERERDVSSWTTIV 242
AL + ++ A ++ Q D++++T +V
Sbjct: 373 ALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILV 406
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 118/219 (53%), Gaps = 23/219 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N+ I +CK + A ++ +M D+ + +I+G+ G +K+A LF++M
Sbjct: 182 NTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMIL 241
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + +++G+ + G +KE + +F + +V T+ ++++GY + Q+ +
Sbjct: 242 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNK 301
Query: 157 AERLFYEM------PERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTI 208
A +F M P+ + S+NIM+ G+ + ++++A++LF++M NVV++ ++
Sbjct: 302 ANSIFNTMAQGGVNPDTQ--SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 359
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
I L + G+I A ++M +R D+ ++++I+D L
Sbjct: 360 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDAL 398
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 114/226 (50%), Gaps = 35/226 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS G+ A +F++M + D+ ++ +++G+ K G +KE + +F M +
Sbjct: 217 SALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 276
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + + ++++GY + +A +F+ PD + +++ M+NG+ KI
Sbjct: 277 QGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ----SYNIMINGFCKIK 332
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWN 206
+++EA LF +M + V++ ++ G ++G+I AL L M + ++++++
Sbjct: 333 KVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYS 392
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER----------ERDVSSWTTIV 242
+I+ AL + +++ A +++++ DV ++T ++
Sbjct: 393 SILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMI 438
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 26/245 (10%)
Query: 11 ILMHAHKLNTHPLIHGY----------PFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT 60
I+M A + + +IHG L L F+ + + C + LC+ G+
Sbjct: 205 IVMKAFCMTFNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGC--LMPGLCRMGQV 262
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA-----ERDTRLWTTMLNG 115
D AR + ++P + L++T+INGY+ G +EA+ L Q E D ++ M++G
Sbjct: 263 DEARVLLSKIPNPNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDG 322
Query: 116 YIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK---D 169
+ G + A + + E +V T++ ++NG+ K +I++A +++ EM + D
Sbjct: 323 LCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPD 382
Query: 170 V-SWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
+ ++N ++ G +N ++E+AL L+ M N +++NT+I A +R I+ A N
Sbjct: 383 IYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVN 442
Query: 227 QMQER 231
+M R
Sbjct: 443 EMLFR 447
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 78 WDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
++ +I+G K G I EA KL D+M D ++ ++ G G + EAR L
Sbjct: 214 FNDVIHGLCKAGRIHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEARVLLSKIP 273
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-----ERKDVSWNIMMGGYGQNGQIEKA 188
+V ++T++NGYV + EEA+ L Y+ E +NIM+ G + G + A
Sbjct: 274 NPNTV-LYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSA 332
Query: 189 LDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
L+ M E E NV+++ +I + G+I+DA + +M + + D+ ++ +++
Sbjct: 333 LEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLI 390
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 107/206 (51%), Gaps = 22/206 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I LCK+G A + ++M E+ ++ + +ING+ K G I++A +++ +M+
Sbjct: 317 NIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDAFQMYGEMSS 376
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEE 156
+ D + +++ G + ++EA L+ E ++ T++T+++ +++ + I++
Sbjct: 377 KGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQ 436
Query: 157 AERLFYEMPER----KDVSWNIMM-----GGYGQNGQIEKALDLFRRM--PEPERNVVSW 205
A +L EM R ++++N ++ G +N ++E+ L L+ M N +++
Sbjct: 437 AYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLEGVIANTITY 496
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQER 231
NT+I A +R I+ A N+M R
Sbjct: 497 NTLIHAFLRGDSIQQAYKLVNEMLFR 522
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 12 LMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP 71
+ A+KL L G+P N I LCK G + D+M
Sbjct: 434 IQQAYKLVNEMLFRGFPLDNITY-------------NGLIKALCKTGLCKN-----DKME 475
Query: 72 E-----RDMRL---------WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
E DM L ++T+I+ +++ I++A KL ++M R L NG I
Sbjct: 476 ETLGLYHDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLI 535
Query: 118 EC----GMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER--- 167
+ G I++ L + G S+++ + + N + I ++ +A R +M R
Sbjct: 536 KALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGLT 595
Query: 168 -KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDA 221
V++N ++ G +NG+I++AL+LF R+ N V++NT+I + DA
Sbjct: 596 PDIVTYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFNDA 652
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 24/240 (10%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM--KRCNS-------FISRLCKEGRTDHARKVFDQM--- 70
LI+G+ + +L F L EM K N I LCKEG+ A+ V M
Sbjct: 193 LIYGFCIVG-QLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKE 251
Query: 71 -PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEA 125
E + ++T+++GY + +A+ +F+ + +R + +T ++NG + M+ EA
Sbjct: 252 GVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEA 311
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQ 181
F E + T+S++++ K +I A L +M +R +++N ++ +
Sbjct: 312 LNFFKEMHCEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCK 371
Query: 182 NGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
N Q++KA+ L +++ + + N+ ++N +I L + GR+E+AQ F + + V WT
Sbjct: 372 NHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWT 431
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 112/215 (52%), Gaps = 16/215 (7%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+NT + N I LCKE A +++ QM + ++ ++I G+ G +KEA
Sbjct: 148 VNTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSSLIYGFCIVGQLKEAF 207
Query: 96 KLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGY 148
LF +M ++ +T +++ + G IKEA+ + E +V T++T+++GY
Sbjct: 208 GLFHEMLLKNINPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGY 267
Query: 149 VKINQIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS 204
N++ +A+ +F + +R+ S+ I++ G + +++AL+ F+ M E N V+
Sbjct: 268 CLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEM-HCEPNTVT 326
Query: 205 WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
++++I AL + GRI A +QM +R + + T
Sbjct: 327 YSSLIDALCKSGRISHAWELLDQMHDRGQPANIIT 361
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 24/217 (11%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ IS LCK G T A K+ Q+ + ++ +++ +I+ K ++ EA +L+ QM +
Sbjct: 122 ALISGLCKIGETRAALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMILK 181
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEA 157
+ ++++ G+ G +KEA LF + ++ T++ +++ K +I+EA
Sbjct: 182 KISPNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINPNIYTFTILIDALCKEGKIKEA 241
Query: 158 ERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLF-----RRMPEPERNVVSWNTI 208
+ + M E V++N +M GY + ++ KA ++F RRM NV S+ I
Sbjct: 242 KNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTP---NVHSYTII 298
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
I L + +++A F +M E + ++++++D L
Sbjct: 299 INGLCKIKMVDEALNFFKEMH-CEPNTVTYSSLIDAL 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA----RKLFD 99
+S I LCK GR HA ++ DQM +R ++ ++++++ K + +A +K+ D
Sbjct: 328 SSLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKD 387
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
Q + + + +++G + G ++ A+ +F + V T++TM+NG +E
Sbjct: 388 QGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKVWTYNTMINGLCLEGLFDE 447
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
A L +M + V++ ++ +N + +KA L R M
Sbjct: 448 AMTLLEKMEDNGCTPDVVTYETIIYALFKNDENDKAEKLLREM 490
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 52/263 (19%)
Query: 26 GYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGY 85
G +R + F L+ + +S I+ L K G + AR VFD MPERD+ W+++I GY
Sbjct: 157 GMELVRMAVRKGFHLHPHVG--SSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGY 214
Query: 86 IKCGMIKEARKLFDQMAERDTRLWTTML---------NGYIECGMIKEARKLFDGPDAEK 136
++ G++KE +LF +M R + + +G+ + G L G +
Sbjct: 215 VQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDD- 273
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
V +++V+ Y + E A +F M R +SWN M+ G QNG + ++ LF ++
Sbjct: 274 -VFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLV 332
Query: 197 EP-------------------------------------ERNVVSWNTIIKALVRCGRIE 219
+ E N+V I+ +CG I+
Sbjct: 333 QSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIK 392
Query: 220 DAQWHFNQMQERERDVSSWTTIV 242
A F M+ +R+V +WT ++
Sbjct: 393 QASDVFRTME--KRNVITWTAML 413
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER---- 104
S + C G T+ A VF++M R + W+ MI+G ++ GM+ E+ LF ++ +
Sbjct: 279 SLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGF 338
Query: 105 DTRLWTTMLNGY-----IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
D+ +++ G +E G + A + G ++ +ST +V+ Y K I++A
Sbjct: 339 DSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLST--AIVDMYSKCGAIKQASD 396
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
+F M +R ++W M+ G QNG E AL LF RM E NV + + + +LV C
Sbjct: 397 VFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRM--QEENVAANSVTLVSLVHC 450
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G ++A KVFDQ P R+ L + M+ G++K KE KLF M RD LN Y
Sbjct: 86 GFLNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIE-----LNSYT 140
Query: 118 ECGMIKEARKLFDGPDAEKSV------------STWSTMVNGYVKINQIEEAERLFYEMP 165
+K L D + V S+M+N VK + +A +F MP
Sbjct: 141 CVFGLKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMP 200
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCG 216
ER V WN ++GGY Q G +++ + LF M + V+ +I+KA CG
Sbjct: 201 ERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKA---CG 250
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC 88
+R L S L+T + + K G A VF M +R++ W M+ G +
Sbjct: 366 IIRKGLESNLVLST------AIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQN 419
Query: 89 GMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEARKLFDG---PDAEKSVSTW 141
G + A KLF +M E + + L + C G +K+ R + E +
Sbjct: 420 GYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNM 479
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSW-NIMMGGYGQNGQIEKALDLFRRMPEPER 200
S +++ Y K +I AE+LFY KDV N M+ GYG +GQ +AL ++ RM + ER
Sbjct: 480 SALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMID-ER 538
Query: 201 NVVSWNTIIKALVRC---GRIEDAQWHFNQMQ 229
+ T + L C G +E+ + F+ M+
Sbjct: 539 LKPNQTTFVSMLTACSHSGLVEEGRTLFHCME 570
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 92/185 (49%), Gaps = 21/185 (11%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---- 129
D+ + ++++ Y G + A +F++M R W M++G ++ GM+ E+ LF
Sbjct: 273 DVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLV 332
Query: 130 ---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG-----YGQ 181
DG D+ T +++ G + + +E ++ + RK + N+++ Y +
Sbjct: 333 QSGDGFDS----GTLVSLIRGCSQTSDLENG-KVLHACIIRKGLESNLVLSTAIVDMYSK 387
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT-- 239
G I++A D+FR M + RNV++W ++ L + G E A F +MQE +S T
Sbjct: 388 CGAIKQASDVFRTMEK--RNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLV 445
Query: 240 TIVDC 244
++V C
Sbjct: 446 SLVHC 450
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 119/221 (53%), Gaps = 27/221 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S I +CK+ + A ++ +M + ++ + +I+G+ G +K+A LF++M
Sbjct: 46 SSIIDSMCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMIL 105
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ ++ +++G+ + G +KEA+ + PD V T+S++++GY +N
Sbjct: 106 ENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD----VVTYSSLMDGYCLVN 161
Query: 153 QIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWN 206
++ +AE +F M R S++IM+ G+ + +++A+ LF+ M + +V++++
Sbjct: 162 EVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYS 221
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+I L + GRI A ++M +R + D+ ++ +I+D L
Sbjct: 222 ALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILDAL 262
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 108/218 (49%), Gaps = 31/218 (14%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
+ CKEGR A+ V M ++ D+ + ++++GY + +A +F+ M+ R
Sbjct: 118 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 177
Query: 105 ---DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKINQI 154
+ + ++ M+NG+ + M+ EA KLF PD V T+S +++G K +I
Sbjct: 178 VTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPD----VITYSALIDGLCKSGRI 233
Query: 155 EEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWN 206
A L EM +R +++N ++ + ++KA+ L ++ P+ N ++
Sbjct: 234 SYALELVDEMHDRGQQPDIITYNSILDALCKKHHVDKAIALLTKLKGQGIRPDMN--TYT 291
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
++K L R G++EDA+ F + + DV ++T ++
Sbjct: 292 ILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 329
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 115/214 (53%), Gaps = 19/214 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS C G+ A +F++M ++ + +++G+ K G +KEA+ + M +
Sbjct: 81 SALISGFCIVGKLKDAIDLFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMK 140
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEE 156
+ D ++++++GY + +A +F+ +V ++S M+NG+ KI ++E
Sbjct: 141 QGIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDE 200
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
A +LF EM ++ ++++ ++ G ++G+I AL+L M + + +++++N+I+
Sbjct: 201 AMKLFKEMHHKQIFPDVITYSALIDGLCKSGRISYALELVDEMHDRGQQPDIITYNSILD 260
Query: 211 ALVRCGRIEDAQWHFNQM--QERERDVSSWTTIV 242
AL + ++ A ++ Q D++++T +V
Sbjct: 261 ALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILV 294
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 118/219 (53%), Gaps = 23/219 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N+ I +CK + A ++ +M D+ + +I+G+ G +K+A LF++M
Sbjct: 46 NTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMIL 105
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + +++G+ + G +KE + +F + +V T+ ++++GY + Q+ +
Sbjct: 106 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNK 165
Query: 157 AERLFYEM------PERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTI 208
A +F M P+ + S+NIM+ G+ + ++++A++LF++M NVV++ ++
Sbjct: 166 ANSIFNTMAQGGVNPDTQ--SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSL 223
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
I L + G+I A ++M +R D+ ++++I+D L
Sbjct: 224 IDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDAL 262
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 114/226 (50%), Gaps = 35/226 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS G+ A +F++M + D+ ++ +++G+ K G +KE + +F M +
Sbjct: 81 SALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 140
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + + ++++GY + +A +F+ PD + +++ M+NG+ KI
Sbjct: 141 QGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ----SYNIMINGFCKIK 196
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWN 206
+++EA LF +M + V++ ++ G ++G+I AL L M + ++++++
Sbjct: 197 KVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYS 256
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER----------ERDVSSWTTIV 242
+I+ AL + +++ A +++++ DV ++T ++
Sbjct: 257 SILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMI 302
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 19/217 (8%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD-HARKVFDQMPERDMR 76
LN +HGY + S F ++T N+ +S K G A VFD + +D+
Sbjct: 162 LNGGKSVHGYV-----IKSGFEMDTFAG--NALVSMYAKCGLVACDAYAVFDSIIHKDVV 214
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIECGMIKE------ARKL- 128
W+ MI G + G++KEA LF M + + + T+ N C E R++
Sbjct: 215 SWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIH 274
Query: 129 ---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
P+ VS + +++ Y+K+ + +EAE LF+ M R VSWN ++ GY NG+
Sbjct: 275 SYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEW 334
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
K+L +F + E ++ T++ L C ++++ Q
Sbjct: 335 LKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQ 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 90/245 (36%), Gaps = 84/245 (34%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECG-----MIKEARKLFDGPDA 134
++N Y KCGM+ + KLFDQ D +W +L+GY G ++K R + +
Sbjct: 83 ALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEV 142
Query: 135 EKSVSTWSTM---------------VNGYVKINQIE---------------------EAE 158
S T +T+ V+GYV + E +A
Sbjct: 143 MPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAY 202
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----------------------- 195
+F + + VSWN M+ G +NG +++A LF M
Sbjct: 203 AVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFD 262
Query: 196 ------------------PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS 237
PE +V N ++ ++ GR ++A+ F M RD+ S
Sbjct: 263 ENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMD--ARDLVS 320
Query: 238 WTTIV 242
W TI+
Sbjct: 321 WNTII 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 15/212 (7%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
CNS IS G A +F M E D+ W+ M+ Y + ++A +LF ++ +
Sbjct: 529 CNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGM 588
Query: 107 RLWTTMLNGYIE-CGMIKEARKL-----FDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ + I C + L + + + + T+++ Y K I A ++
Sbjct: 589 KPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLKGTLLDAYAKCGIIGYAYKI 648
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPERNVVSWNTIIKALVRCG 216
F ++ V + M+GGY +G EKAL+ F M +P+ V + +I+ A G
Sbjct: 649 FQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDH--VIFTSILSACSHAG 706
Query: 217 RIEDAQWHFNQMQE---RERDVSSWTTIVDCL 245
RI + F+ +++ + + + +VD L
Sbjct: 707 RIAEGLKIFDSIEKIHGMKPTIEQFACVVDLL 738
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
+ G+ HA + D + +++ Y KCG I+EA F ++ +D W ++L+
Sbjct: 371 QAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDA 430
Query: 116 YIE-------CGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE----RLFYEM 164
+ E ++ KL PD+ ++ T +++ +++E R +
Sbjct: 431 FGEKRHHSRFLSLLHVMLKLDIRPDS-VTILTIIHFCASLLRVKKVKEIHGYSIRSGSLL 489
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWH 224
N ++ Y + G IE A +F+ + E +RN+V+ N++I V G DA
Sbjct: 490 CATAPTVGNAILDAYSKCGNIEYANKMFQNLSE-KRNLVTCNSLISGYVGLGSHYDANMI 548
Query: 225 FNQMQERERDVSSWTTIV 242
F+ M E D+++W +V
Sbjct: 549 FSGMS--ETDLTTWNLMV 564
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 51/85 (60%)
Query: 111 TMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
+L+ Y +CG I+ A K+F ++++ T +++++GYV + +A +F M E
Sbjct: 499 AILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLT 558
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRM 195
+WN+M+ Y +N E+AL+LF ++
Sbjct: 559 TWNLMVRVYAENDCPEQALELFLKL 583
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 32/172 (18%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D+ L T+++ Y KCG+I A K+F ++D ++T M+ GY GM
Sbjct: 625 DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGM------------ 672
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF- 192
+EK++ T+S M+N +K P+ V + ++ G+I + L +F
Sbjct: 673 SEKALETFSHMLNMGIK--------------PDH--VIFTSILSACSHAGRIAEGLKIFD 716
Query: 193 --RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ + + + ++ L R G + +A + F E + + W T++
Sbjct: 717 SIEKIHGMKPTIEQFACVVDLLARGGHVSEA-YSFVTKIPIEANANIWGTLL 767
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 113/239 (47%), Gaps = 44/239 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ + K G R++FD+ ++++ +++T+++ Y++ G+ E + D+M ++ R
Sbjct: 272 NALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQR 331
Query: 108 ---------------------------------------LWTTMLNGYIECGMIKEARKL 128
+ +++ Y++CG + A K+
Sbjct: 332 PDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKV 391
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
FD + K+V TW++++ G V+ ++E A R+F EMPE VSWN M+G Q E+A
Sbjct: 392 FDSM-SNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEA 450
Query: 189 LDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
+DL R M + + V+ I A G ++ A+W + +++ + D+ T +VD
Sbjct: 451 IDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVD 509
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 111/276 (40%), Gaps = 83/276 (30%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAE---- 103
NS I G+ D RKVFD+M ER++ W ++INGY M KEA LF +M E
Sbjct: 171 NSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVE 230
Query: 104 -----------------------------------RDTRLWTTMLNGYIECGMIKEARKL 128
+T + +L+ Y++CG + R++
Sbjct: 231 PNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREI 290
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------------------------ 164
FD ++K++ ++T+++ YV+ E + EM
Sbjct: 291 FD-EFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGD 349
Query: 165 ---------------PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
ER D N ++ Y + G+ E A +F M + VV+WN++I
Sbjct: 350 LSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSM--SNKTVVTWNSLI 407
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
LVR G +E A F +M E ++ SW T++ +
Sbjct: 408 AGLVRDGELELALRIFGEMP--ESNLVSWNTMIGAM 441
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 12/182 (6%)
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF--- 129
+D+ + +++I+ Y CG + RK+FD+M ER+ WT+++NGY M KEA LF
Sbjct: 165 KDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM 224
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE----RKDVSWNIMMGGYGQNGQI 185
E + T ++ K+ +E +++ M E + N ++ Y + G +
Sbjct: 225 VEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDM 284
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM---QERERDVSSWTTIV 242
++F ++N+V +NTI+ V+ G + ++M +R V+ +TI
Sbjct: 285 YAVREIFDEF--SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIA 342
Query: 243 DC 244
C
Sbjct: 343 AC 344
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--- 130
DM+L +++ + +CG A ++F+ M +RD WT + G K A +LFD
Sbjct: 500 DMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEML 559
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQI 185
D + + ++ + +++ +LF+ M + VS + M+ G+ G +
Sbjct: 560 KQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLL 619
Query: 186 EKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQW 223
E+A DL + MP +V+ W + + A + +E A +
Sbjct: 620 EEAFDLMKSMPIKPNDVI-WGSFLAACRKHKNVEFANY 656
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 15/196 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + K D A K+F++ D+ + +MI Y + G +EA KL+ QM D +
Sbjct: 426 NSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIK 485
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ +++LN ++ ++L + +++VN Y K IE+A+R
Sbjct: 486 PDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRA 545
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN--TIIKALVRC--- 215
F E+P+R VSW+ M+GG Q+G ++AL +F +M ++ VS N T++ L C
Sbjct: 546 FSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQML---KDCVSPNHITLVSVLCACNHA 602
Query: 216 GRIEDAQWHFNQMQER 231
G + + + +F M+E+
Sbjct: 603 GLVNEGKQYFETMEEK 618
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 83/287 (28%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKV-FDQMPERDMRLWDTMINGYIKCGMIKEA 94
+ F+L++ +K C + L GR H+ V D + D+ + +I+ Y KC M+ +A
Sbjct: 284 NVFTLSSALKACAAM--GLKDLGRQIHSCSVKIDS--DSDLFVAVGLIDLYSKCEMMDDA 339
Query: 95 RKLFDQMAERDTRL-WTTMLNGYIECGMIKEARKLFDGPDAE-------------KSVST 140
R+ +D M +D + +++GY +CG ++A LF E KSV++
Sbjct: 340 RRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVAS 399
Query: 141 W-------------------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+++++ Y K + I+EA ++F E V++ M
Sbjct: 400 LQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSM 459
Query: 176 MGGYGQNGQIEKALDLFRRM------PEP------------------------------- 198
+ Y Q+G E+AL L+ +M P+P
Sbjct: 460 ITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGF 519
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
++ + N+++ +CG IEDA F+++ +R + SW+ ++ L
Sbjct: 520 MSDIFASNSLVNMYAKCGSIEDADRAFSEIP--QRGIVSWSAMIGGL 564
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
++ F+ T +K C+ I + G+ HA V E D + +T++ Y KCG ++
Sbjct: 81 SNEFTFPTVLKACS--IKKDLNMGKKVHAMTVVSGF-ESDAFVSNTLVVMYAKCGQFSDS 137
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF----DG---PDAEKSVSTWSTMVNG 147
+KLF + E W + + +++ + E LF +G P+ E S+S G
Sbjct: 138 KKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPN-EYSLSIILNACAG 196
Query: 148 YVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN 206
L ++ D S N ++ Y + G+IE A+D+FR M P+ VSWN
Sbjct: 197 LRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPD--TVSWN 254
Query: 207 TIIKALV 213
II V
Sbjct: 255 AIIAGCV 261
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 53/252 (21%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE-RDMRLWDTMINGYIKCGMIKEARK 96
FS ++ ++ N ++ R +A + DQ E R + W +I+ Y++ G KEA
Sbjct: 12 FSRHSSLR--NHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALL 69
Query: 97 LFDQMAERDTR----LWTTMLNGY-----IECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
F++M + + T+L + G A + G +++ VS +T+V
Sbjct: 70 AFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVS--NTLVVM 127
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE-------- 199
Y K Q ++++LF + E VSWN + + Q+ + + +DLF+RM E +
Sbjct: 128 YAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSL 187
Query: 200 ----------------RNV-------------VSWNTIIKALVRCGRIEDAQWHFNQMQE 230
R V S N ++ + GRIEDA F +M
Sbjct: 188 SIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREM-- 245
Query: 231 RERDVSSWTTIV 242
D SW I+
Sbjct: 246 IHPDTVSWNAII 257
>Medtr5g068510.1 | PPR containing plant-like protein | HC |
chr5:29007454-29010085 | 20130731
Length = 405
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S I L GR A +F + ++ + + MI GY G I++++KLF++M+ +
Sbjct: 69 DSLIGGLVSIGRIKEAEMIFYGLRDKTLISNNLMIKGYAMSGRIRKSKKLFEKMSLKHLT 128
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM--- 164
TM+ Y + G + EA KLFD E++ +W++M++GY+ Q EA +L+ M
Sbjct: 129 SLNTMITVYSKNGELDEAVKLFDKTKGERNCVSWNSMMSGYIHNGQHSEALKLYVTMRRY 188
Query: 165 -PERKDVSWNIMMGGYG-----QNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
E + +++++ GG Q GQ+ A + P E NV ++ +CG +
Sbjct: 189 SVEYRRSTFSVLSGGCAYLCSFQQGQLLHA--HLAKTPYQE-NVYVGTALVDFYSKCGHL 245
Query: 219 EDAQWHFNQMQERERDVSSWTTIVD 243
DAQ F + ++WT +++
Sbjct: 246 ADAQRSFTSIFS-PNVAAAWTALIN 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
D + + + Y C + +A+++++ E + +++ G V I +I+EAE +FY +
Sbjct: 32 DNSVSSALAEFYCVCDAVDDAKRVYENMVGEACSNVADSLIGGLVSIGRIKEAEMIFYGL 91
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWH 224
++ +S N+M+ GY +G+I K+ LF +M +++ S NT+I + G +++A
Sbjct: 92 RDKTLISNNLMIKGYAMSGRIRKSKKLFEKM--SLKHLTSLNTMITVYSKNGELDEAVKL 149
Query: 225 FNQMQERERDVSSWTTIV 242
F++ + ER+ SW +++
Sbjct: 150 FDKTKG-ERNCVSWNSMM 166
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 118/217 (54%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N+ I +CK + A +F +M + D+ + +I+G+ G +K+A LF++M
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + ++N + + G +KE + +FD + + T++++++GY + ++ +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 157 AERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A+ +F M + D+ S++IM+ G+ + + ++A++LF+ M +VV+++++I
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + GRI A +QM +R ++ ++ +I+D L
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 120/222 (54%), Gaps = 29/222 (13%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS C G+ A +F++M + D+ ++ ++N + K G +KE + +FD M +
Sbjct: 264 SALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + + ++++GY + +A+ +F+ PD + ++S M+NG+ KI
Sbjct: 324 QGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD----IQSYSIMINGFCKIK 379
Query: 153 QIEEAERLFYEMPERKD-----VSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSW 205
+ +EA LF EM RK+ V+++ ++ G ++G+I AL L +M + N+ ++
Sbjct: 380 KFDEAMNLFKEM-HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTY 438
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
N+I+ AL + +++ A + +++ + D+S+++ ++ L
Sbjct: 439 NSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 113/218 (51%), Gaps = 27/218 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N ++ CK+G+ + VFD M ++ ++ ++++++GY + +A+ +F+ MA+
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKIN 152
D + ++ M+NG+ + EA LF PD V T+S++++G K
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD----VVTYSSLIDGLSKSG 414
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWN 206
+I A +L +M +R ++N ++ + Q++KA+ L + + + ++ +++
Sbjct: 415 RISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYS 474
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+IK L + G++EDA+ F + + DV ++T ++
Sbjct: 475 ILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMI 512
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 87/173 (50%), Gaps = 15/173 (8%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+N +++ + I+ CK + D A +F +M + D+ + ++I+G K G I A
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420
Query: 96 KLFDQMAER----DTRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGY 148
+L DQM +R + + ++L+ + + +A L F + +ST+S ++ G
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Query: 149 VKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPE 197
+ ++E+A ++F ++ + DV ++ IM+ G+ G +AL L +M +
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMED 533
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 15/196 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + K D A K+F++ D+ + +MI Y + G +EA KL+ QM D +
Sbjct: 426 NSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIK 485
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ +++LN ++ ++L + +++VN Y K IE+A+R
Sbjct: 486 PDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRA 545
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN--TIIKALVRC--- 215
F E+P+R VSW+ M+GG Q+G ++AL +F +M ++ VS N T++ L C
Sbjct: 546 FSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQML---KDCVSPNHITLVSVLCACNHA 602
Query: 216 GRIEDAQWHFNQMQER 231
G + + + +F M+E+
Sbjct: 603 GLVNEGKQYFETMEEK 618
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 83/287 (28%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKV-FDQMPERDMRLWDTMINGYIKCGMIKEA 94
+ F+L++ +K C + L GR H+ V D + D+ + +I+ Y KC M+ +A
Sbjct: 284 NVFTLSSALKACAAM--GLKDLGRQIHSCSVKIDS--DSDLFVAVGLIDLYSKCEMMDDA 339
Query: 95 RKLFDQMAERDTRL-WTTMLNGYIECGMIKEARKLFDGPDAE-------------KSVST 140
R+ +D M +D + +++GY +CG ++A LF E KSV++
Sbjct: 340 RRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVAS 399
Query: 141 W-------------------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+++++ Y K + I+EA ++F E V++ M
Sbjct: 400 LQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSM 459
Query: 176 MGGYGQNGQIEKALDLFRRM------PEP------------------------------- 198
+ Y Q+G E+AL L+ +M P+P
Sbjct: 460 ITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGF 519
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
++ + N+++ +CG IEDA F+++ +R + SW+ ++ L
Sbjct: 520 MSDIFASNSLVNMYAKCGSIEDADRAFSEIP--QRGIVSWSAMIGGL 564
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
++ F+ T +K C+ I + G+ HA V E D + +T++ Y KCG ++
Sbjct: 81 SNEFTFPTVLKACS--IKKDLNMGKKVHAMTVVSGF-ESDAFVSNTLVVMYAKCGQFSDS 137
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF----DG---PDAEKSVSTWSTMVNG 147
+KLF + E W + + +++ + E LF +G P+ E S+S G
Sbjct: 138 KKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPN-EYSLSIILNACAG 196
Query: 148 YVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN 206
L ++ D S N ++ Y + G+IE A+D+FR M P+ VSWN
Sbjct: 197 LRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPD--TVSWN 254
Query: 207 TIIKALV 213
II V
Sbjct: 255 AIIAGCV 261
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 53/252 (21%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE-RDMRLWDTMINGYIKCGMIKEARK 96
FS ++ ++ N ++ R +A + DQ E R + W +I+ Y++ G KEA
Sbjct: 12 FSRHSSLR--NHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALL 69
Query: 97 LFDQMAERDTR----LWTTMLNGY-----IECGMIKEARKLFDGPDAEKSVSTWSTMVNG 147
F++M + + T+L + G A + G +++ VS +T+V
Sbjct: 70 AFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVS--NTLVVM 127
Query: 148 YVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE-------- 199
Y K Q ++++LF + E VSWN + + Q+ + + +DLF+RM E +
Sbjct: 128 YAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSL 187
Query: 200 ----------------RNV-------------VSWNTIIKALVRCGRIEDAQWHFNQMQE 230
R V S N ++ + GRIEDA F +M
Sbjct: 188 SIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREM-- 245
Query: 231 RERDVSSWTTIV 242
D SW I+
Sbjct: 246 IHPDTVSWNAII 257
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 102/183 (55%), Gaps = 17/183 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N + CKEGR A+ V D M +D++ ++T+++G+ K +KE + +F M +
Sbjct: 297 NILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMK 356
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEE 156
+ + + ++++GY + +A+K+F+ +V +++ M+NG+ KI ++++
Sbjct: 357 QGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDK 416
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A +LF EM + V++N ++ G ++G+I A L M + + N++++N+I+
Sbjct: 417 AMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN 476
Query: 211 ALV 213
AL+
Sbjct: 477 ALL 479
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 116/207 (56%), Gaps = 19/207 (9%)
Query: 58 GRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LW 109
G+ A +F++M + D+ ++ +++G+ K G +K+A+ + D M +D + +
Sbjct: 272 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTF 331
Query: 110 TTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPE 166
T+++G+ + +KE + +F + +V T+ ++++GY + Q+ +A+++F M +
Sbjct: 332 NTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ 391
Query: 167 RKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIED 220
R S+NIM+ G+ + +++KA+ LF M +VV++N++I L + G+I
Sbjct: 392 RGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISY 451
Query: 221 AQWHFNQMQERER--DVSSWTTIVDCL 245
A N+M +R + ++ ++ +I++ L
Sbjct: 452 AFQLVNEMHDRGQPPNIITYNSILNAL 478
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 122/241 (50%), Gaps = 23/241 (9%)
Query: 28 PFLRTRLASTFSLNTE--MKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTM 81
PF + LA + E + N+FI C +G+ A D++ L + T+
Sbjct: 135 PFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTL 194
Query: 82 INGYIKCGMIKEARKLF----DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK- 136
ING K G + A +L ++ + + ++ T+++G + + +A L+ A++
Sbjct: 195 INGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMYKDKHVNDAFDLYSEMVAKRI 254
Query: 137 --SVSTWSTMVNGYVKINQIEEAERLFYEM---PERKDV-SWNIMMGGYGQNGQIEKALD 190
V T+S ++ G+ + ++++A LF +M + DV ++NI++ G+ + G+++KA +
Sbjct: 255 SPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKN 314
Query: 191 LFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVD--C 244
+ M + + NV ++NT++ + ++++ + F M Q + +V ++ +++D C
Sbjct: 315 VLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 374
Query: 245 L 245
L
Sbjct: 375 L 375
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 27/209 (12%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+HAH + T L FLRTRL ++ +C+S A VFD+MPE
Sbjct: 62 VHAHMIKTRYL--PSVFLRTRLIVLYT------KCDSL----------GDAHNVFDEMPE 103
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR-----LWTTMLNGYIECGMI--KEA 125
R++ W MI+ Y + G +A LF QM T T + + G I ++
Sbjct: 104 RNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQI 163
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
L + E V S++++ Y K +I EA +F +PER VS ++ GY Q G
Sbjct: 164 HSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLD 223
Query: 186 EKALDLFRRMPEP--ERNVVSWNTIIKAL 212
E+AL+LFRR+ + N V++ ++ AL
Sbjct: 224 EEALELFRRLQGEGMKSNYVTYTGVLTAL 252
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S + K+G+ AR VF+ +PERD+ +I+GY + G+ +EA +LF ++ +
Sbjct: 180 SSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK 239
Query: 108 ----LWT---TMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+T T L+G + K+ + V +++++ Y K + + R+
Sbjct: 240 SNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRI 299
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC--GRI 218
F M ER +SWN M+ GY ++G+ + L LF M E + TI+ L C G +
Sbjct: 300 FDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGL 359
Query: 219 EDAQWH-FNQMQ----ERERDVSSWTTIVDCL 245
ED + FN M E E + + +VD L
Sbjct: 360 EDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLL 391
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G+ H + ++P + L +++I+ Y KCG + +R++FD M ER W ML GY
Sbjct: 261 GKQVHNHVLRSEIPSF-VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYS 319
Query: 118 ECGMIKEARKLFD--------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP---- 165
+ G +E KLF PD+ ++ S +G ++ ++ +F +M
Sbjct: 320 KHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLE----DKGLNIFNDMSSGKI 375
Query: 166 --ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQ 222
E K + ++ G++G++E+A + ++MP EP + W +++ A ++ +
Sbjct: 376 EVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAI--WGSLLGACRVHSNVDIGE 433
Query: 223 WHFNQMQERE 232
+ Q+ E E
Sbjct: 434 FAGQQLLEIE 443
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 114/218 (52%), Gaps = 17/218 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N + N + LCKEG+ A+ V M ++ D+ ++++GY + +A
Sbjct: 259 NINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKA 318
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNG 147
+ LF+ M +R + ++ ++NG + +I EA F ++K + T+S++++G
Sbjct: 319 KALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDG 378
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPE--PERN 201
K +I A L EM +R ++++ ++ +N ++KA++L +++ + + N
Sbjct: 379 LCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPN 438
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
+ ++N +I L + GR++DAQ F + + +++ WT
Sbjct: 439 MYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWT 476
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 120/225 (53%), Gaps = 19/225 (8%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEAR 95
+NT++ N+ I LCKE A +++ +M + + + ++I G+ G K+A
Sbjct: 190 VNTDVVMYNTIIDSLCKEKLVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAF 249
Query: 96 KLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGY 148
+LF++M ++ + +++ + G +KEA+ + + + T +++++GY
Sbjct: 250 RLFNEMVLKNINPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGY 309
Query: 149 VKINQIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNV 202
+N++ +A+ LF M +R + +++++ G +N I++A+D F+ M + N
Sbjct: 310 CLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNT 369
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
V+++++I L + GRI A ++M +R + +V ++++++ L
Sbjct: 370 VTYSSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHAL 414
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
+S I LCK GR HA ++ D+M +R ++ + ++++ K + +A +L ++ +
Sbjct: 373 SSLIDGLCKSGRISHAWELLDEMHDRGQPANVITFSSLLHALCKNRHVDKAIELVKKLKD 432
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
RD + + +++G + G +K+A+ +F +V T++ M+NG ++E
Sbjct: 433 RDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWTYNIMINGLCLEGLLDE 492
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
A L +M + V++ I++ +N + EKA L R M
Sbjct: 493 ALALLSKMEDNGCIPNAVTFEIIVHALFKNDENEKAEKLLREM 535
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 27/238 (11%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHGY + T ++ N I K G AR+VF++M RD+ W +MI
Sbjct: 362 IHGYVLRHMHI-------THVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIK 414
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC-------GMIKEAR----KLFDGP 132
GY+ G I +A LF + + + L G ++ IKE + F G
Sbjct: 415 GYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGK 474
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
D +S ++++ Y K ++ A +F +M ER SWN M+G Y +G + L+LF
Sbjct: 475 D----LSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYTEVLELF 530
Query: 193 RRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSS---WTTIVDCL 245
M + + V++ +I+ A G +E+ F M + V + ++ IVD L
Sbjct: 531 DHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLL 588
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 54/263 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHGY T + ++ + + CK T ARK+F+++ +D +++ M+
Sbjct: 262 IHGYMI-------TMGVELDLVASTALVDLYCKIDITK-ARKLFERLGNKDAVVYNVMMT 313
Query: 84 GYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE---K 136
GY++ G+ EA +F +M A + L+ +++ + I+ R +
Sbjct: 314 GYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHIT 373
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
V + +++ Y K + +A +F M R VSW M+ GY +G I+KA+ LFR +
Sbjct: 374 HVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQ 433
Query: 197 EPERNVVSW-------------------------------------NTIIKALVRCGRIE 219
++ S N++I +CG++
Sbjct: 434 REHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLC 493
Query: 220 DAQWHFNQMQERERDVSSWTTIV 242
A++ F QM ER ++SW ++
Sbjct: 494 TARYIFQQMT--ERCLTSWNAMI 514
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 54/236 (22%)
Query: 56 KEGRTDHARKVFDQMPERDMR---LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTM 112
K G A VF +M R M W+ +I GY++ G EA +LF +M R+
Sbjct: 183 KCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLT 242
Query: 113 LNGYIEC---------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
L I C GM + G + + ST +V+ Y KI+ I +A +LF
Sbjct: 243 LANAIFCCVELNYLRRGMSIHGYMITMGVELDLVAST--ALVDLYCKID-ITKARKLFER 299
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--------NVVS----------- 204
+ + V +N+MM GY +NG +A+++FR M + N++S
Sbjct: 300 LGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLV 359
Query: 205 ------------------WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N II A + G + DA+ FN+M R RD+ SWT+++
Sbjct: 360 RSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRM--RTRDLVSWTSMI 413
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 47 CNSFISRL-CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
C SFI + C R H + D+ + +++I Y KCG + AR +F QM ER
Sbjct: 456 CLSFIKEVHCFSYRFFHGK---------DLSVNNSLITTYAKCGKLCTARYIFQQMTERC 506
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV---STWSTMVNGYVKINQIEEAERLFY 162
W M+ Y G E +LFD A K T+++++ +EE ++F
Sbjct: 507 LTSWNAMIGAYAMHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFG 566
Query: 163 EMPER-----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN 201
M + +V ++ ++ + G++ +A +L + MP +
Sbjct: 567 IMMKEYAIVPNEVHYSCIVDLLSRAGRLREAYNLVKSMPSTHSS 610
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 118/230 (51%), Gaps = 29/230 (12%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+NT++ N I+ LCK+ A +++ +M + D+ ++++I G+ G +KEA
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254
Query: 96 KLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTM 144
LF +M + D ++ +++ + G I A+ + PD V T+S++
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPD----VVTYSSL 310
Query: 145 VNGYVKINQIEEAERLFYEMPERKDV-----SWNIMMGGYGQNGQIEKALDLFRRM--PE 197
++GY +N++ +A+ +F M R V S+NIM+ G G+ +++AL LF+ M
Sbjct: 311 MDGYCLVNEVNKAKHVFSTM-SRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369
Query: 198 PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ V++N++I L + GRI A ++M D+ ++ +++D L
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVL 419
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N ++ + + LCK+G A+ + M ++ D+ + ++++GY + +A
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKA 323
Query: 95 RKLFDQMAERDT----RLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWST 143
+ +F M+ + M+NG + M+ EA LF PD T+++
Sbjct: 324 KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT----VTYNS 379
Query: 144 MVNGYVKINQIEEAERLFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEP- 198
+++G K+ +I A +L EM D+ ++N ++ +N I+KA+ L +++ +
Sbjct: 380 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Query: 199 -ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
+ ++ ++N +I L + GR+++AQ F + + V++WT
Sbjct: 440 IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWT 481
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N ++ C G A +F ++ + ++T+ING G +KEA D +
Sbjct: 98 NILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA 157
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
L + T++NG + G + A ++ +G V ++ ++N K + +
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIK 210
A +L+ EM ++ V++N ++ G+ GQ+++A LF M N V +++ ++
Sbjct: 218 AYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVD--CL 245
AL + G I A+ M ++ DV ++++++D CL
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCL 316
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTMLNGY 116
HA +F ++P+ ++ W+T+I+GY+ G K+A LF ++ ER D +T+ +
Sbjct: 59 HAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKL-ERSQICADAFSFTSAMVAC 117
Query: 117 IECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
+ ++K + G D V+ + +++ Y K +E A R+F ++ ++ +S
Sbjct: 118 AQLSLLKLGSSIHSKTVKLGMDNNTVVA--NCLIDMYGKCGSVERAVRIFSDIADKDVIS 175
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
WN ++ NG I + MP P+ VVS+N +I + + G+IEDA + M
Sbjct: 176 WNSVIAACANNGNIGLGFKFLQLMPNPD--VVSYNGLINGIAQAGKIEDAVRILSTMPCP 233
Query: 232 ERDVSSWTTIV 242
SSW +++
Sbjct: 234 NS--SSWNSVI 242
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
N ++ N I+ + + G+ + A ++ MP + W+++I G++ + EA ++F +
Sbjct: 201 NPDVVSYNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGK 260
Query: 101 MAERDTRL----WTTMLNGYIEC-----GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKI 151
M ++ ++ ++ +LNG GM+ + G D+ S+ S++++ Y K
Sbjct: 261 MHLKNLQIDEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDS--SIVVGSSLIDMYSKC 318
Query: 152 NQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
Q+ +AE +F + R VSWN M+ GY +NG +A+ LF +
Sbjct: 319 GQVNDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFELL 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
NT + C I K G + A ++F + ++D+ W+++I G I K
Sbjct: 141 NTVVANC--LIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQL 198
Query: 101 MAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
M D + ++NG + G I++A ++ S S+W++++ G+V +++ EA +
Sbjct: 199 MPNPDVVSYNGLINGIAQAGKIEDAVRILSTMPCPNS-SSWNSVITGFVNRSRVPEALEM 257
Query: 161 FYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVR 214
F +M + + +++I++ G + + + + + ++V +++I +
Sbjct: 258 FGKMHLKNLQIDEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSK 317
Query: 215 CGRIEDAQWHFNQMQERERDVSSWTTIV 242
CG++ DA+ FN + R++ SW ++
Sbjct: 318 CGQVNDAESIFNVLS--NRNLVSWNAMI 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 39/138 (28%)
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE-- 199
+T++ YVK++ A LF E+P+ VSWN ++ GY GQ +KAL LF ++ +
Sbjct: 45 TTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQIC 104
Query: 200 -----------------------------------RNVVSWNTIIKALVRCGRIEDAQWH 224
N V N +I +CG +E A
Sbjct: 105 ADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRI 164
Query: 225 FNQMQERERDVSSWTTIV 242
F+ + ++DV SW +++
Sbjct: 165 FSDIA--DKDVISWNSVI 180
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 115/216 (53%), Gaps = 19/216 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+++ LCK G+ D AR+VF++M + ++ + M++GY K ++++A L+++M
Sbjct: 358 NTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKL 417
Query: 104 RDTRL----WTTMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
R L + T++ Y + G + EA K + + V T++ +++GY K +E
Sbjct: 418 RSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDE 477
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFR--RMPEPERNVVSWNTIIK 210
RLF EM R ++++ M+ Y + ++A+D++R +M E +VV ++ II
Sbjct: 478 VRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIID 537
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDC 244
L + G +E + M E+ + +V ++ +I+D
Sbjct: 538 TLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDA 573
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTM-----IN 83
F R RL + + ++ IS + GR A +F R M W + N
Sbjct: 236 FERARLEG---YGSTVHSFSAMISAFGRNGRFPDAVDLF-----RSMSSWGVVPNVITYN 287
Query: 84 GYIKCGMIKEAR-----KLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDA 134
I G E K +D+M D + ++L+ GM + A+KL D
Sbjct: 288 SIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDH 347
Query: 135 E---KSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEK 187
V T++T ++ K QI+ A R+F EM ++ V+++ MM GY + +E
Sbjct: 348 RCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLED 407
Query: 188 ALDLFRRMPEPERNV----VSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTI 241
AL+L+ M R+V VS+NT++ + G +++A +M+ RDV ++ +
Sbjct: 408 ALNLYEEM--KLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNAL 465
Query: 242 V 242
+
Sbjct: 466 L 466
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 29/221 (13%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSF----ISRLCKEGRTDH-ARKVFDQMPERDMRLW 78
IHGY F R C+SF I C+ G++ H A ++F+ RD+ LW
Sbjct: 295 IHGYAFRRG-----------FDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLW 343
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIEC--------GMIKEARKLF 129
++I Y + G +A KLF++M +T + T+L C G + L
Sbjct: 344 SSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILK 403
Query: 130 DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
G S+ + ++N Y K ++++ ++F EMP R V+WN M+ YG +G E+AL
Sbjct: 404 FGIGF--SIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQAL 461
Query: 190 DLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
F M E + + V++ ++ A G + + Q F Q+
Sbjct: 462 QHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQV 502
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 15/89 (16%)
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR------M 195
+++++ Y K IE A ++F MP R ++WN M+ Y QNG + +AL + + +
Sbjct: 105 NSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFL 164
Query: 196 PEPERNVVSWNTIIKALVR-CGRIEDAQW 223
P+PE ++ ++V CGR D W
Sbjct: 165 PKPE--------LLASMVSMCGREMDLGW 185
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 13/195 (6%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPER---DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
CN+ IS K HARKVFD++ R D W+++++ Y C + A LF +M
Sbjct: 48 CNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTV 107
Query: 104 RDTRLWTTM-------LNGYIECGMI-KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
L T+ + GY+ G+ ++ + V + +V+ Y K ++E
Sbjct: 108 GYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKME 167
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALV 213
+A ++F M + V+WN M+ GY QNG+ E AL LF +M E E +VV+W+++I
Sbjct: 168 DANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYA 227
Query: 214 RCGRIEDAQWHFNQM 228
+ G +A F QM
Sbjct: 228 QRGFGCEAMDVFRQM 242
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 52/224 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ + K G+ + A KVF++M +D+ W+ M+ GY + G ++A LF +M E
Sbjct: 154 NALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIE 213
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLF---------------------------------- 129
D W+++++GY + G EA +F
Sbjct: 214 SDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET 273
Query: 130 -----------DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM-PERKDV-SWNIMM 176
+ D ++ + +++ Y K +E A +F E+ P+ +DV +W +M+
Sbjct: 274 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 333
Query: 177 GGYGQNGQIEKALDLFRRMPEPERNVVSWN-TIIKALVRCGRIE 219
GGY Q+G AL LF M + + +V + TI L+ C R+
Sbjct: 334 GGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLS 377
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMA--ERDTRLWTTMLNGYIECGMIKEARKLFDG 131
D+ + + +I+ Y KC ++ AR +FD++ +RD WT M+ GY + G A +LF
Sbjct: 292 DLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSE 351
Query: 132 ---------PD-----------AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
P+ A S + ++ YV + ++ LF
Sbjct: 352 MFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVA-------- 403
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
N ++ Y ++G ++ A +F M + RN VSW +++ GR EDA F++M++
Sbjct: 404 -NCLIDMYSKSGDVDTAQVVFDSMSK--RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRK 459
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 17/193 (8%)
Query: 8 LSFILMHAHKL---NTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHAR 64
+S +LM +L N IH Y R+ + S + N I K G D A+
Sbjct: 366 ISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDV-----LFVANCLIDMYSKSGDVDTAQ 420
Query: 65 KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECG 120
VFD M +R+ W +++ GY G ++A ++FD+M + D + +L G
Sbjct: 421 VVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSG 480
Query: 121 MIKEARKLF----DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-ERKDVSWNIM 175
M+ LF + V ++ MV+ + ++ EA RL +M E V W +
Sbjct: 481 MVDRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISL 540
Query: 176 MGGYGQNGQIEKA 188
+ + IE A
Sbjct: 541 LSACRTHSNIELA 553
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------ 101
N +S L K G A+ +F+ MP ++ +W++MI+GY + G + + LF +M
Sbjct: 96 NLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLE 155
Query: 102 -AERDTRLWTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
RD + +T+ ++CG AR DG + E+ S++VN Y K ++
Sbjct: 156 TVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLD 215
Query: 156 EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC 215
A R+ + E D S + ++ GY G++ A +F +P V WN+II V
Sbjct: 216 SAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCS--VLWNSIISGYVSN 273
Query: 216 GRIEDAQWHFNQMQ 229
G +A FN+M+
Sbjct: 274 GEEMEALALFNKMR 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ C GR + A++VF+ MP + + W++++ G + EA F M + D +
Sbjct: 365 NTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVK 424
Query: 108 LWTTMLNGYIECGMIKEARKLFD---------GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ I IK + +L + G ++++ + T ++V+ Y K +E
Sbjct: 425 MDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICT--SLVDFYCKCGLVEMGR 482
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCG 216
++F M + +VSWN M+ GY NG +AL LF M + +++ I+ A CG
Sbjct: 483 KVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCG 542
Query: 217 RIEDAQWHFNQMQE 230
+E+ + F M+
Sbjct: 543 LVEEGRDLFRTMKH 556
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A T L ++ C S + CK G + RKVFD M + D W+TM+ GY G EA
Sbjct: 453 AITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEA 512
Query: 95 RKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLF----DGPDAEKSVSTWSTMVN 146
LF++M R +T +L+ CG+++E R LF D + +S MV+
Sbjct: 513 LTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVD 572
Query: 147 GYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQ 184
+ ++ EA L EMP + D + W ++ G +G
Sbjct: 573 LFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGN 611
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 40/233 (17%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F + C+S ++ K G D A +V + E D +++GY G + +ARK+
Sbjct: 192 FEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKV 251
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------------------------- 131
FD + + LW ++++GY+ G EA LF+
Sbjct: 252 FDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNV 311
Query: 132 ------------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY 179
A + ST+++ Y K ++ +LF+E+ + N M+ Y
Sbjct: 312 ELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVY 371
Query: 180 GQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
G++E A ++F MP + ++SWN+I+ L + +A F+ M + +
Sbjct: 372 CNCGRVEDAKEVFNSMPN--KTLISWNSILVGLTQNACPSEALDTFSMMNKLD 422
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 88 CGMIKEARKLFDQM---AERDTRLWTT--MLNGYIECGMIKEARKLFDGPDAEKSVSTWS 142
C I+EAR+L + + + TT +L Y G + +A KLFD S W+
Sbjct: 7 CRTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFS-WN 65
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
T++ ++ + ++ LF+ MP + SWN+++ ++G +++A LF M P +N
Sbjct: 66 TLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAM--PMKNP 123
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ WN++I R G ++ F +M
Sbjct: 124 LVWNSMIHGYSRHGYPRNSLLLFKEMN 150
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 115/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I +CK+ + A ++ +M R ++ + +I+G+ G +K+A LF++M
Sbjct: 214 STIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTS 273
Query: 104 R----DTRLWTTMLNGYIECGMIKEARK---LFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
D + +++ + + G +KEA+ + + + T++++++GY +N++
Sbjct: 274 ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNM 333
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A+ + M R S+NI++ G+ + +++A+ LF+ M + NV+++N++I
Sbjct: 334 AKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID 393
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + GRI A + M +R + D+ ++++I+D L
Sbjct: 394 GLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 113/223 (50%), Gaps = 19/223 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N ++ N + CKEGR A+ M ++ D+ ++++++GY + A
Sbjct: 275 NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMA 334
Query: 95 RKLFDQMAERD----TRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ + + M+ R R + ++NG+ + M+ +A KLF ++ +V T++++++G
Sbjct: 335 KSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDG 394
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I A L M +R ++++ ++ +N ++KA+ L ++ + N
Sbjct: 395 LCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPN 454
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERD--VSSWTTIV 242
+ ++ +I L + GR+EDA+ F + + + V+++T ++
Sbjct: 455 MYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMI 497
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 113/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS C G+ A +F++M D+ ++ +++ + K G +KEA+ M +
Sbjct: 249 SALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMK 308
Query: 104 R----DTRLWTTMLNGYI---ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + ++++GY E M K +V +++ ++NG+ KI +++
Sbjct: 309 QGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQ 368
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
A +LF EM ++ +++N ++ G ++G+I AL+L M + + +++++++I+
Sbjct: 369 AMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILD 428
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
AL + ++ A +++++ ++ ++T ++D L
Sbjct: 429 ALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ C+ G A V ++ E D +T I G+ G I +A D++
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
L + T++NG + G + A +L DG + V +ST+++ K + +
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIK 210
A L+ EM R+ V+++ ++ G+ G+++ A+ LF +M N V ++N ++
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288
Query: 211 ALVRCGRIEDAQWHFNQM--QERERDVSSWTTIVD--CL 245
A + GR+++A+ M Q + D+ ++ +++D CL
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCL 327
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 62/266 (23%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A F +++ ++ I K G + ARK+FD++PER++ W +MI+GY++ +EA
Sbjct: 112 AFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREA 171
Query: 95 RKLFDQMAERD------------------------------------------------- 105
LF + D
Sbjct: 172 VFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEG 231
Query: 106 -TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+ T+++ Y +CG I +RK+FDG + E V +W++++ Y + EA LF +M
Sbjct: 232 CLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIAVYAQNGLSVEAFSLFSDM 290
Query: 165 PERKDVSWN-------IMMGGYGQNGQIEKAL-DLFRRMPEPERNVVSWNTIIKALVRCG 216
+R +V +N ++ + QI K + D +M E E N+V +I+ +CG
Sbjct: 291 VKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMYCKCG 349
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
R+E A+ F+++ + ++V SWT +V
Sbjct: 350 RVEMARKAFDRL--KRKNVKSWTVMV 373
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ + K G +RKVFD M E D+ W+++I Y + G+ EA LF M +R
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAER 159
+ + +L G ++ + + D + E ++ +++V+ Y K ++E A +
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
F + + SW +M+ GYG +G ++A+ +F M + N +++ +++ A G
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416
Query: 218 IEDAQWH-FNQMQ---ERERDVSSWTTIVDCL 245
+++ WH FN+M+ + E + ++ +VD L
Sbjct: 417 LKEG-WHWFNKMKCEFDVEPGIEHYSCMVDLL 447
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 2 AKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD 61
A L + H+ L IH ++ L + T S + CK GR +
Sbjct: 300 AVTLSAVLLACAHSGALQIGKCIHD-QVVKMELEDNLVVGT------SIVDMYCKCGRVE 352
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYI 117
ARK FD++ ++++ W M+ GY G KEA K+F +M + + ++L
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412
Query: 118 ECGMIKEARKLFDGP----DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD-VSW 172
G++KE F+ D E + +S MV+ + ++EA L EM + D + W
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVW 472
Query: 173 NIMMGGYGQNGQIE----KALDLFRRMPE 197
++G + +E A LF+ P
Sbjct: 473 GSLLGACRIHKNVELGEISARKLFKLDPS 501
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E ++ + ++++ Y KCG ++ ARK FD++ ++ + WT M+ GY G KEA K+F
Sbjct: 332 EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYE 391
Query: 132 ---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNG 183
+ + T+ +++ ++E F +M DV ++ M+ G+ G
Sbjct: 392 MIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAG 451
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKA 211
+++A L + M + + + + W +++ A
Sbjct: 452 YLKEAYGLIQEM-KVKPDFIVWGSLLGA 478
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 62/266 (23%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A F +++ ++ I K G + ARK+FD++PER++ W +MI+GY++ +EA
Sbjct: 112 AFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREA 171
Query: 95 RKLFDQMAERD------------------------------------------------- 105
LF + D
Sbjct: 172 VFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEG 231
Query: 106 -TRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+ T+++ Y +CG I +RK+FDG + E V +W++++ Y + EA LF +M
Sbjct: 232 CLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIAVYAQNGLSVEAFSLFSDM 290
Query: 165 PERKDVSWN-------IMMGGYGQNGQIEKAL-DLFRRMPEPERNVVSWNTIIKALVRCG 216
+R +V +N ++ + QI K + D +M E E N+V +I+ +CG
Sbjct: 291 VKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMYCKCG 349
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
R+E A+ F+++ + ++V SWT +V
Sbjct: 350 RVEMARKAFDRL--KRKNVKSWTVMV 373
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 15/212 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ + K G +RKVFD M E D+ W+++I Y + G+ EA LF M +R
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEV 296
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAER 159
+ + +L G ++ + + D + E ++ +++V+ Y K ++E A +
Sbjct: 297 RYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGR 217
F + + SW +M+ GYG +G ++A+ +F M + N +++ +++ A G
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGL 416
Query: 218 IEDAQWH-FNQMQ---ERERDVSSWTTIVDCL 245
+++ WH FN+M+ + E + ++ +VD L
Sbjct: 417 LKEG-WHWFNKMKCEFDVEPGIEHYSCMVDLL 447
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 2 AKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD 61
A L + H+ L IH ++ L + T S + CK GR +
Sbjct: 300 AVTLSAVLLACAHSGALQIGKCIHD-QVVKMELEDNLVVGT------SIVDMYCKCGRVE 352
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYI 117
ARK FD++ ++++ W M+ GY G KEA K+F +M + + ++L
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412
Query: 118 ECGMIKEARKLFDGP----DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD-VSW 172
G++KE F+ D E + +S MV+ + ++EA L EM + D + W
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVW 472
Query: 173 NIMMGGYGQNGQIE----KALDLFRRMPE 197
++G + +E A LF+ P
Sbjct: 473 GSLLGACRIHKNVELGEISARKLFKLDPS 501
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E ++ + ++++ Y KCG ++ ARK FD++ ++ + WT M+ GY G KEA K+F
Sbjct: 332 EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYE 391
Query: 132 ---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNG 183
+ + T+ +++ ++E F +M DV ++ M+ G+ G
Sbjct: 392 MIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAG 451
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKA 211
+++A L + M + + + + W +++ A
Sbjct: 452 YLKEAYGLIQEM-KVKPDFIVWGSLLGA 478
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F LN+ + N+ + K G +++ K+F+++P+R+ W+T+I GY++ G + A L
Sbjct: 367 FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNL 426
Query: 98 FDQMAERDTR----LWTTMLNGYIECGMIK---EARKLFDGPDAEKSVSTWSTMVNGYVK 150
F M E D + ++++L ++ + L K +++++ Y K
Sbjct: 427 FTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAK 486
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTI 208
+I +A F +M +R +VSWN M+ GY +G +AL+LF M + N +++ +
Sbjct: 487 CGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGV 546
Query: 209 IKALVRCGRIEDAQWHFNQMQE 230
+ A G + Q HF M +
Sbjct: 547 LSACSNAGLLYKGQAHFESMSK 568
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 46/231 (19%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTT 111
K G A+++F++MP+ D+ W MI Y + KEA LF +M + + + +
Sbjct: 284 KSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343
Query: 112 MLNG---YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
+L + + K+ +V + +++ Y K +IE + +LF E+P+R
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPE----------------------------- 199
DV+WN ++ GY Q G E+A++LF M E +
Sbjct: 404 DVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS 463
Query: 200 --------RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ V N++I +CGRI DA+ F++M +RD SW ++
Sbjct: 464 LTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN--KRDEVSWNAMI 512
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 58/235 (24%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G D AR VFD + +DM W M+ Y + +E+ +LF+QM R+ N +
Sbjct: 185 GNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQM-----RIMGYKPNNFT 239
Query: 118 ECGMIKEARKLFDGPDAEKSVSTWS-------------TMVNGYVKINQIEEAERLFYEM 164
G +K L + + KSV + ++ Y K +I +A+RLF EM
Sbjct: 240 ISGALKSCLGL-EAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298
Query: 165 PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE------------------------- 199
P+ + W++M+ Y Q+ + ++ALDLF RM +
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358
Query: 200 ------------RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
NV N I+ +CG IE++ F ++ +R DV +W TI+
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN-DV-TWNTII 411
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
N + NS I K GR + AR FD+M +RD W+ MI GY GM EA LFD
Sbjct: 471 NKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDM 530
Query: 101 MAERDTR----LWTTMLNGYIECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKIN 152
M D + + +L+ G++ + + F+ D + + ++ MV ++
Sbjct: 531 MQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLG 590
Query: 153 QIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFR 193
+ +EA +L E+ + V W ++G I K +DL R
Sbjct: 591 RFDEAMKLIGEIAYQPSVMVWRALLGA----CVIHKKVDLGR 628
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 70 MPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF 129
M +D + +++I+ Y KCG I +AR FD+M +RD W M+ GY GM EA LF
Sbjct: 469 MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF 528
Query: 130 D---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQ 181
D D + + T+ +++ + + + F M + D+ + M+ G+
Sbjct: 529 DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGR 588
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALV 213
G+ ++A+ L + + +V+ W ++ A V
Sbjct: 589 LGRFDEAMKLIGEIAY-QPSVMVWRALLGACV 619
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N + + + CK+G+ A+ V + + ++ ++++I+GY + +A
Sbjct: 270 NINPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKA 329
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNG 147
+ + MA+R D + ++ M+NG+ + M+ EA LF G T+S++++G
Sbjct: 330 EVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDG 389
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I +A L EM +R +++N ++ QN ++KA+ L R+ +
Sbjct: 390 LCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQGIQPT 449
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIV 242
+ ++ +IK L GR++DAQ F + + DV ++T ++
Sbjct: 450 LCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNLDVYTYTAMI 492
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 116/215 (53%), Gaps = 19/215 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM---- 101
I +CK+ + A ++ +M + D+ ++ +I+G+ G +K+A L +M
Sbjct: 211 IIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILEN 270
Query: 102 AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ + +++ + + G KEA+ + + +V T++++++GY + Q+ +AE
Sbjct: 271 INPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQVNKAE 330
Query: 159 RLFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKAL 212
+ M +R DV S++IM+ G+ + +++A+DLF+ M + + ++++++I L
Sbjct: 331 VILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITYSSLIDGL 390
Query: 213 VRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ GRI DA ++M +R + ++ ++ ++++ L
Sbjct: 391 CKSGRISDAWELVSEMSDRGQQPNIITYNSLLNAL 425
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 41/230 (17%)
Query: 45 KRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
K CN+ ++ K G ARK+F+ + R + W + G +K ++ R LFD+M ER
Sbjct: 159 KVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPER 218
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFD----------------------GPDAEKSVSTW- 141
+ WT M+ GY+ G KEA L + V W
Sbjct: 219 NEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWV 278
Query: 142 -----------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
+++V+ Y K +I A +F M +R V+WN M+GG +G
Sbjct: 279 HCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGM 338
Query: 185 IEKALDLFRRMPEPER-NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
+ A+D+F M E + + V++ ++ A G +E +F+ ++ R
Sbjct: 339 GKIAVDMFPSMVEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYR 388
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 46/228 (20%)
Query: 61 DHARKVFDQMPER------------------------DMRLWDTMINGYIK-CGMIKEAR 95
HARK+FD++P+ MR +D ++G + C + AR
Sbjct: 74 SHARKLFDEIPQSHKDSVDYTALIRHCPPFESLKLFIQMRQFDLPLDGVVMVCALNACAR 133
Query: 96 ------KLFDQMA--------ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTW 141
K+ QM + ++ ++N Y++ G++ EARK+F+G + +SV +W
Sbjct: 134 LGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEV-RSVVSW 192
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN 201
S + G VK +E LF EMPER +V+W +M+ GY NG ++A L + M
Sbjct: 193 SCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGF 252
Query: 202 VVSWNTIIKALVRCGRIED---AQW-HFNQMQERERD--VSSWTTIVD 243
+S+ T+ L C + D +W H ++E D V T++VD
Sbjct: 253 RLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVD 300
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 114/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I +CK + A ++ +M + D+ + +I+G+ G + +A LF++M
Sbjct: 200 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMIS 259
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
D ++ +++G+ + G +KEA+ + + V T+ ++++GY + Q+ +
Sbjct: 260 EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNK 319
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
A+ +F M + S+NIM+ G+ + ++++A++LF+ M +VV++N++I
Sbjct: 320 AKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID 379
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + G+I A ++M +R D ++ +I+D L
Sbjct: 380 GLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 116/217 (53%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS C G+ + A +F++M D+ + +++G+ K G +KEA+ + M +
Sbjct: 235 SALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMK 294
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + ++++GY + +A+ +F+ +V +++ M+NG+ KI +++E
Sbjct: 295 QGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDE 354
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIK 210
A LF EM + V++N ++ G ++G+I AL L M + + +++N+I+
Sbjct: 355 AMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD 414
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
AL + +++ A +M++ + D+ ++T ++D L
Sbjct: 415 ALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 113/220 (51%), Gaps = 17/220 (7%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+N ++ + + CKEGR A+ V M ++ D+ + ++++GY + +A+
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 96 KLFDQMAE----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGY 148
+F+ MA+ + + + M+NG+ + + EA LF + V T++++++G
Sbjct: 322 SIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381
Query: 149 VKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNV 202
K +I A +L EM +R +++N ++ +N Q++KA+ L +M + + ++
Sbjct: 382 CKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDM 441
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ +I L + GR++DAQ F + + +++ +T V
Sbjct: 442 YTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTV 481
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 21/199 (10%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+T+ +S I+ K G D ARKVFD MPER++ W T+I Y K G ++EA LF
Sbjct: 100 LSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFR 159
Query: 100 QM----AERDTRLWTTMLNG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVK 150
QM + + ++L G Y++C +F G ++ ++ ++MVN Y K
Sbjct: 160 QMRYEGIQPSSVTLLSLLFGVSEVPYVQC---LHGCAIFYGFMSD--LNLLNSMVNLYGK 214
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTI 208
IE+ +LF M R VSWN ++ Y Q G + + L L +RM E + ++ ++
Sbjct: 215 CGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSV 274
Query: 209 IKALV-----RCGRIEDAQ 222
+ V R GR+ Q
Sbjct: 275 LSVAVSTGDMRLGRLVHGQ 293
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 19/220 (8%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHGY LR +L SL+T NS ++ K G D + VFD+M +RD+ W+ ++
Sbjct: 391 IHGY-ILRQKL----SLDTAAH--NSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVA 443
Query: 84 GYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEAR---KLFDGPDAEK 136
GY + G + +A LF++M D+ +++ G G + +
Sbjct: 444 GYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLRP 503
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
+ +++V+ Y K ++ A+R F MP + VSW+ ++ GYG +G+ E AL L+ +
Sbjct: 504 CILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFL 563
Query: 197 EP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
E + N V + +I+ + G I+ N + RD
Sbjct: 564 ETRIKPNHVIFLSILSSCSHNGLIDQG---LNIYESMTRD 600
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMI 82
L+HG L F L+ ++ SFI K G + A K+F++ ++D+ LW MI
Sbjct: 289 LVHG-----QILRGGFVLDAHIE--TSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMI 341
Query: 83 NGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK-- 136
+G ++ +A +FDQM + T +++ + G + + +K
Sbjct: 342 SGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQKLS 401
Query: 137 -SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ +++V Y K ++++ +F M +R VSWN ++ GY QNG + KA LF M
Sbjct: 402 LDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEM 461
Query: 196 PEPER--NVVSWNTIIKALVRCGRIEDAQW 223
+ + ++ ++++ G++ +W
Sbjct: 462 RSCHQTPDSITIVSLVQGCASTGQLHPGKW 491
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
+ ++ + +K C SF++ L G + H R + + + D + ++IN Y+K G A
Sbjct: 67 SDAYTFPSLLKAC-SFLN-LFHLGNSLHQRVIVNGL-STDSYIASSLINFYVKFGYNDVA 123
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI 154
RK+FD M ER+ WTT++ Y + G ++EA LF E + T+++ ++++
Sbjct: 124 RKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEV 183
Query: 155 EEAERL-----FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
+ L FY ++ N M+ YG+ G IE LF M R+VVSWN+++
Sbjct: 184 PYVQCLHGCAIFYGFMSDLNL-LNSMVNLYGKCGSIEDCRKLFEFMDR--RDVVSWNSLL 240
Query: 210 KALVRCGRI 218
A + G +
Sbjct: 241 SAYAQIGDL 249
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 102/254 (40%), Gaps = 50/254 (19%)
Query: 35 ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEA 94
A + +++ NS ++ K G + RK+F+ M RD+ W+++++ Y + G + E
Sbjct: 193 AIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEV 252
Query: 95 RKLFDQMAER---------DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMV 145
L +M + + L + G + G + + L G + + T + +
Sbjct: 253 LLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIET--SFI 310
Query: 146 NGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEPE 199
Y+K I A ++F ++ V W M+ G QN +KAL +F +M P E
Sbjct: 311 VMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTE 370
Query: 200 R-------------------------------NVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+ + N+++ +CG ++ + F++M
Sbjct: 371 TMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRM 430
Query: 229 QERERDVSSWTTIV 242
+RD+ SW IV
Sbjct: 431 S--KRDLVSWNAIV 442
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 112/211 (53%), Gaps = 19/211 (9%)
Query: 54 LCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLW 109
+CK+ + A ++ +M ++ + +I+G+ G ++EA LF +M +
Sbjct: 1 MCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPN 60
Query: 110 TTMLNGYIEC----GMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
NG ++ G I+EA+ + + D + V +S+++NGY +N++ +A+ +F
Sbjct: 61 VYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFK 120
Query: 163 EMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKALVRCG 216
M ER+ DV S+NIM+ + + +++A+ LF MP + +VV+++T+I L + G
Sbjct: 121 TMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSG 180
Query: 217 RIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
R+ A ++M +R ++ ++ IVD L
Sbjct: 181 RLSYAMELVDEMDDRGEPPNIITYCPIVDVL 211
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N + N + CKEG+ + A+ V + M E+D++ + +++NGY + +A
Sbjct: 56 NINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKA 115
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWST 143
+ +F MAER D R + M+N + + M+ EA KLF+ PD V T+ T
Sbjct: 116 QSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPD----VVTYHT 171
Query: 144 MVNGYVKINQIEEAERLFYEMPER 167
+++G K ++ A L EM +R
Sbjct: 172 LIDGLCKSGRLSYAMELVDEMDDR 195
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC 88
F T L ++ + N I+ K G+ AR +FD+MP R + W+TMI+GY +
Sbjct: 22 FFTTLLEASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQW 81
Query: 89 GMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMI---KEARKLFDGPDAEKSVSTW 141
G EA L M + ++ L+ G + K+ L ++
Sbjct: 82 GKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVG 141
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN 201
S +++ YV+ I EAE +F E+ + V W++M+ GY Q I A+++F +M P R+
Sbjct: 142 SALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKM--PVRD 199
Query: 202 VVSWNTIIKALVR 214
VV+W T+I +
Sbjct: 200 VVAWTTLISGYAK 212
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S I L GR A +F + ++ + + MI GY G K+++KLF++M+ +
Sbjct: 308 DSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLT 367
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM--- 164
TM+ Y + G + EA KLFD E++ TW++M++GY+ + EA +L+ M
Sbjct: 368 SLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRF 427
Query: 165 -PERKDVSWNIMMGGYG-----QNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
E +++++ Q GQ+ A + P E NV ++ +CG +
Sbjct: 428 LVEYSRSTFSVLFRACAYLCSFQQGQLLHA--HLAKTPYQE-NVYVGTALVDFYSKCGHL 484
Query: 219 EDAQWHFNQMQERERDVSSWTTIVD 243
DAQ F + +V++WT +++
Sbjct: 485 ADAQRSFTSI--FSPNVAAWTALIN 507
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
N I G+ ++K+F++M + + +TMI Y K G + EA KLFD+ ER+
Sbjct: 339 NLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNC 398
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTM------------------- 144
W +M++GYI G EA KL+ E S ST+S +
Sbjct: 399 VTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAH 458
Query: 145 ----------------VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
V+ Y K + +A+R F + +W ++ GY +G +A
Sbjct: 459 LAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEA 518
Query: 189 LDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER---DVSSWTTIVD 243
+ FR M + N ++ ++ A G +++ F+ MQ R + +T +VD
Sbjct: 519 ISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVD 578
Query: 244 CL 245
L
Sbjct: 579 LL 580
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 102/225 (45%), Gaps = 50/225 (22%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIK----CGMIKEARKLFDQM----------------- 101
A ++F++MP RD+ W T+I+GY K C + A LF M
Sbjct: 188 AMEIFEKMPVRDVVAWTTLISGYAKREDGC---ERALDLFGCMRRSSEVLPNEFTLDCVL 244
Query: 102 -----------------------AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+ D + + + Y + +A+++++ E
Sbjct: 245 RVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACS 304
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP 198
+ +++ G V + +++EA +FY + ++ +S N+M+ GY +GQ +K+ LF +M
Sbjct: 305 NVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKM--S 362
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+++ S NT+I + G +++A F++ + ER+ +W +++
Sbjct: 363 LKHLTSLNTMITVYSKNGELDEAVKLFDKTKG-ERNCVTWNSMMS 406
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 19/228 (8%)
Query: 14 HAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER 73
H L ++H + F+ S F N+ ++ + ++ K ARKVFD+MP+R
Sbjct: 128 HLSALKIGTILHSHVFV-----SGFGSNSFVQA--AIVAFYAKSSALCVARKVFDKMPQR 180
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF 129
+ W+TMI+GY G+ EA LF +M E D+ + ++ + + G ++ ++
Sbjct: 181 SVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVY 240
Query: 130 DGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
D + +V ++++N + + + A +F + E ++W M+ GYG +G
Sbjct: 241 DSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGV 300
Query: 187 KALDLFRRMPEPER----NVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+A++LF M + ER N V++ ++ A G I + + F M+E
Sbjct: 301 EAMELFYEM-KKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMRE 347
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 95/232 (40%), Gaps = 50/232 (21%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGM----IKEARKLFDQMAERDTRLWTTML 113
G + R++F + + D L++++I + G I R++ + + +T++
Sbjct: 64 GSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVF 123
Query: 114 NG-----YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
++ G I + G + V + +V Y K + + A ++F +MP+R
Sbjct: 124 KACAHLSALKIGTILHSHVFVSGFGSNSFVQ--AAIVAFYAKSSALCVARKVFDKMPQRS 181
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPE----PER------------------------ 200
V+WN M+ GY NG +A+ LFR+M E P+
Sbjct: 182 VVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYD 241
Query: 201 ---------NVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
NV+ ++I RCG + A+ F+ + E +V +WT ++
Sbjct: 242 SIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSIS--EGNVIAWTAMIS 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
S+++ + K C + +S L K G H+ VF + + ++ Y K + AR
Sbjct: 115 SSYTFTSVFKAC-AHLSAL-KIGTILHSH-VFVSGFGSNSFVQAAIVAFYAKSSALCVAR 171
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
K+FD+M +R W TM++GY G+ EA LF + +T V+ +QI
Sbjct: 172 KVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIG 231
Query: 156 EAERL--FYEMPERKDVSWNIMMGG-----YGQNGQIEKALDLFRRMPEPERNVVSWNTI 208
E Y+ + N+++G + + G + +A +F + E NV++W +
Sbjct: 232 SLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEG--NVIAWTAM 289
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
I G +A F +M++ V + T V L
Sbjct: 290 ISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVL 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 66 VFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGM 121
V+D + +R L ++IN + +CG ++ AR +FD ++E + WT M++GY G
Sbjct: 239 VYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGY 298
Query: 122 IKEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI--- 174
EA +LF E+ + T+ +++ I E ++F M E + +
Sbjct: 299 GVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLEHH 358
Query: 175 --MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
M+ G+ G + +A + + E W ++ A
Sbjct: 359 VCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGA 397
>Medtr4g087150.2 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 576
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC 88
F T L ++ + N I+ K G+ AR +FD+MP R + W+TMI+GY +
Sbjct: 22 FFTTLLEASQPYPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQW 81
Query: 89 GMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMI---KEARKLFDGPDAEKSVSTW 141
G EA L M + ++ L+ G + K+ L ++
Sbjct: 82 GKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVG 141
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN 201
S +++ YV+ I EAE +F E+ + V W++M+ GY Q I A+++F +M P R+
Sbjct: 142 SALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKM--PVRD 199
Query: 202 VVSWNTIIKALVR 214
VV+W T+I +
Sbjct: 200 VVAWTTLISGYAK 212
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S I L GR A +F + ++ + + MI GY G K+++KLF++M+ +
Sbjct: 308 DSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLT 367
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM--- 164
TM+ Y + G + EA KLFD E++ TW++M++GY+ + EA +L+ M
Sbjct: 368 SLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRF 427
Query: 165 -PERKDVSWNIMMGGYG-----QNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
E +++++ Q GQ+ A + P E NV ++ +CG +
Sbjct: 428 LVEYSRSTFSVLFRACAYLCSFQQGQLLHA--HLAKTPYQE-NVYVGTALVDFYSKCGHL 484
Query: 219 EDAQWHFNQMQERERDVSSWTTIVD 243
DAQ F + +V++WT +++
Sbjct: 485 ADAQRSFTSI--FSPNVAAWTALIN 507
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 102/225 (45%), Gaps = 50/225 (22%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIK----CGMIKEARKLFDQM----------------- 101
A ++F++MP RD+ W T+I+GY K C + A LF M
Sbjct: 188 AMEIFEKMPVRDVVAWTTLISGYAKREDGC---ERALDLFGCMRRSSEVLPNEFTLDCVL 244
Query: 102 -----------------------AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+ D + + + Y + +A+++++ E
Sbjct: 245 RVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACS 304
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP 198
+ +++ G V + +++EA +FY + ++ +S N+M+ GY +GQ +K+ LF +M
Sbjct: 305 NVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKM--S 362
Query: 199 ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+++ S NT+I + G +++A F++ + ER+ +W +++
Sbjct: 363 LKHLTSLNTMITVYSKNGELDEAVKLFDKTKG-ERNCVTWNSMMS 406
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 39/192 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
N I G+ ++K+F++M + + +TMI Y K G + EA KLFD+ ER+
Sbjct: 339 NLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNC 398
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTM------------------- 144
W +M++GYI G EA KL+ E S ST+S +
Sbjct: 399 VTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAH 458
Query: 145 ----------------VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
V+ Y K + +A+R F + +W ++ GY +G +A
Sbjct: 459 LAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEA 518
Query: 189 LDLFRRMPEPER 200
+ FR M + ++
Sbjct: 519 ISRFRSMLDQDK 530
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 117/219 (53%), Gaps = 23/219 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL------WDTMINGYIKCGMIKEARKLFDQM 101
++ I LCK+ A ++ +M MR+ ++T+I G+ G +K+A L ++M
Sbjct: 68 STIIYSLCKDKLVIDAFDLYSEMVA--MRIFPNVVTYNTLIYGFCIVGQMKQAIDLLNEM 125
Query: 102 AERDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQI 154
++ + T+++G + G +K+ARK+ E +V T+S +++GY + ++
Sbjct: 126 LLKNISPNVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEV 185
Query: 155 EEAERLFYEMPERKDVS----WNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTI 208
+A +F M R S + +M+ G +N +++A++LF+ M ++V++N++
Sbjct: 186 NKATFVFNTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSL 245
Query: 209 IKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
I L++ GRI DA N+M R + DV ++ +++D L
Sbjct: 246 IDGLLKYGRISDAWDLVNEMHNRGQPADVITYNSLLDAL 284
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 103/195 (52%), Gaps = 15/195 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N + LCKEG A+ + M ++ D+ + ++++GY + +A+ +F+ + +
Sbjct: 213 NILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGK 272
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
R D +T ++NG + M+ EA LF E ++ T+S++++G K ++ A
Sbjct: 273 RKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMHCEPNMVTYSSLIDGLCKSGRVSHAWE 332
Query: 160 LFYEMPERKD-----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKAL 212
L +M + + +++N ++ +N ++KA+ L +++ + E N+ ++N +I L
Sbjct: 333 LLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGL 392
Query: 213 VRCGRIEDAQWHFNQ 227
+ GR+ +AQ F++
Sbjct: 393 CKEGRLRNAQGLFDE 407
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 92 KEARKLFDQMAERDT--RLWTT--MLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTM 144
K+A LF +M + ++T+ +++ + G +K+A+ + V T++++
Sbjct: 191 KQAFGLFHEMVLTNILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSL 250
Query: 145 VNGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER 200
++GY +NQ+ +A+ +F + +RK DV S+ I++ G + +++AL+LF+ M E
Sbjct: 251 MDGYCLVNQVNKAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEM-HCEP 309
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
N+V+++++I L + GR+ A ++M +
Sbjct: 310 NMVTYSSLIDGLCKSGRVSHAWELLDKMHD 339
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 111/247 (44%), Gaps = 31/247 (12%)
Query: 27 YPFLRTRLAST-------------FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER 73
YP L L ST FS + N I L K G D A+KVFD+MP R
Sbjct: 38 YPSLVASLISTYAHCQQPNIAHHVFSRVMNLFNMNLVIESLVKSGECDIAKKVFDKMPVR 97
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLF 129
D+ W+T+I GY+K +A +F M E D + +++ G G A K
Sbjct: 98 DVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNA-KWV 156
Query: 130 DGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQ 184
G EK V + +V+ Y K +++ ++ +F E R VS WN M+ G +G
Sbjct: 157 HGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVF-ECVVRDHVSVWNAMINGLAIHGH 215
Query: 185 IEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSW 238
A +F RM E E + V++ I+K CG +E + +F MQ R + + +
Sbjct: 216 ALDATVVFSRM-EVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHY 274
Query: 239 TTIVDCL 245
T+VD L
Sbjct: 275 GTMVDLL 281
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 111/221 (50%), Gaps = 17/221 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N +M N + CKEG+ A+ V M ++ M+ + +++GY + +A
Sbjct: 107 NINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKA 166
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +F+ MA+ D ++ ++NG + M EA LF+ K V T++++++G
Sbjct: 167 KSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDG 226
Query: 148 YVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K+ +I A +L EM +R ++++ ++ +N Q++KA+ L ++ + N
Sbjct: 227 LCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPN 286
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ ++ +I L + GR++DA F + + +++ T V
Sbjct: 287 MYTYTILIDGLCKGGRLDDAHNIFEDLLVKGYNITVNTYTV 327
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 117/217 (53%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
N+ I +CK+ + A ++ +M + D+ ++ +I+G+ G +K+A LF++M
Sbjct: 46 NTIIDGMCKDKHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTL 105
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
D + +++ + + G +KEA+ + + +V T+S +++GY + ++ +
Sbjct: 106 ENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNK 165
Query: 157 AERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIK 210
A+ +F M + D+ S++I++ G + ++A++LF M + +VV++N++I
Sbjct: 166 AKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLID 225
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + G+I A ++M +R D+ ++++I+D L
Sbjct: 226 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 262
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 114/221 (51%), Gaps = 27/221 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS C G+ A +F++M DM ++ +++ + K G +KEA+ + M +
Sbjct: 81 NALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMK 140
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + ++ +++GY + +A+ +F+ PD + ++S ++NG KI
Sbjct: 141 QGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPD----IHSYSILINGLCKIK 196
Query: 153 QIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWN 206
+EA LF EM RK V++N ++ G + G+I AL L M + ++++++
Sbjct: 197 MTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYS 256
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+I+ AL + +++ A +++++ ++ ++T ++D L
Sbjct: 257 SILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 297
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEA 94
++N + N + CKEG+ A+ V M + ++L + T+I G+ G +KEA
Sbjct: 273 NINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEA 332
Query: 95 RKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNG 147
LF++M + +T +++ + + I +A + + D +V T+S ++ G
Sbjct: 333 VDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYG 392
Query: 148 YVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RN 201
Y +N++ EA+R+F M +R DV S+ IM+ + + +++A LF M + +
Sbjct: 393 YCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPD 452
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
VV++++++ L + RI +A ++M +R + ++ ++++I+D L
Sbjct: 453 VVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDAL 498
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 21/212 (9%)
Query: 55 CKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER----DT 106
C + A+++F M +R D+ + MI+ + K M+ EARKLF++M + D
Sbjct: 394 CLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDV 453
Query: 107 RLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
++++++G + I A KL D ++ T+S++++ +K +Q+EEA LF E
Sbjct: 454 VTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKE 513
Query: 164 MPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPERNVVSWNTIIKALVRC 215
++ ++ I + G +NG++E A ++F + RN +W +I R
Sbjct: 514 FKDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMIHGFCRK 573
Query: 216 GRIEDAQWHFNQMQERE--RDVSSWTTIVDCL 245
G ++A + M++ D ++ TI+ L
Sbjct: 574 GLFDEALTLLSNMKDNSCIPDTVTYKTIISSL 605
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 49 SFISRLCKEGRTDHA----RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I++LCK G T A R+V ++ + + +++ +I+ K ++ A L+ +M +
Sbjct: 178 TLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAK 237
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ + T+L+G G +K+A LF + +V T++ +V+G+ K ++++A
Sbjct: 238 RISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDA 297
Query: 158 ERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKA 211
+ + M + V+++ ++ G+ G++++A+DLF +M + NV ++ ++ A
Sbjct: 298 KVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKMILGKVNPNVYTFTILVDA 357
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
+ +I+ A + N M E+DV+ CL
Sbjct: 358 FCKEEKIDKANYVLNVMM--EKDVTPNVITYSCL 389
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMIKEARKLF 129
D+ ++T+INGY G E + +D++ +L + T++N + G +EA +L
Sbjct: 137 DVVTFNTLINGYCLKGENDELLRFYDKVVGLGFQLNQISYGTLINKLCKGGETREALQLL 196
Query: 130 ---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQN 182
DG + V ++ +++ K + A L+YEM ++ +++N ++ G
Sbjct: 197 RQVDGKLVQPHVVMYNVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIV 256
Query: 183 GQIEKALDLFRRMPEPERN--VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
GQ++ A+ LF+ M N V ++N ++ + G+++DA+ M + +++ T
Sbjct: 257 GQLKDAISLFKIMVSENINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVT 315
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 116/221 (52%), Gaps = 17/221 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N ++ + CKEGR A+ V M + ++ ++++++GY + +A
Sbjct: 172 NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKA 231
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +F+ MA+ D + ++ ++NG+ + M+ EA +L ++ +V T+S++++G
Sbjct: 232 KSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDG 291
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I A +L EM +R V+++ ++ +N Q++ A+ L +M + N
Sbjct: 292 LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPN 351
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ ++ +IK L + G++EDA+ F + + +++ +T V
Sbjct: 352 MYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 123/236 (52%), Gaps = 30/236 (12%)
Query: 36 STFSLNTEMKRC--NSFI-SRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKC 88
+T +LNT +K N I + C G+ A +F++M D+ + +++G+ K
Sbjct: 131 NTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKE 190
Query: 89 GMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKS 137
G +KEA+ + M + + + ++++GY + +A+ +F+ PD
Sbjct: 191 GRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPD---- 246
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFR 193
+ ++S ++NG+ KI ++EA L EM ++ V+++ ++ G ++G+I AL L
Sbjct: 247 IQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVD 306
Query: 194 RMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
M + + N+V++++I+ AL + ++++A QM+ + + ++ ++T ++ L
Sbjct: 307 EMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 49/256 (19%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
+ + F+ +K C + K+G+ H + + D+ + + +I+ Y KCG +
Sbjct: 113 IGNKFTFGIVIKTCVGLMDM--KKGKQVHGM-ICEMGLMNDVLIGNGLIDMYGKCGSVDY 169
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVK 150
A ++FD M+ERD WT+M+ G+ G I+EA LF+ E + TW+ ++ Y +
Sbjct: 170 ACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYAR 229
Query: 151 INQIEEA----ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEP-- 198
+ ++A ER+ E V+WN ++ G+ QN Q + +FR M P
Sbjct: 230 LGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVT 289
Query: 199 -----------------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ NV + +I +CG ++DA+ F+++Q
Sbjct: 290 IAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQ 349
Query: 230 ERERDVSSWTTIVDCL 245
+ +V+SW ++DC
Sbjct: 350 CK--NVASWNAMIDCF 363
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 48/230 (20%)
Query: 49 SFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I C GR + A +F++M E + W+ +I Y + G K+A ++M +
Sbjct: 187 SMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKE 246
Query: 105 ----DTRLWTTMLNGYIE--------------------------------CGMI------ 122
D W +++G+ + CG +
Sbjct: 247 GFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWG 306
Query: 123 KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQN 182
+E + +V S +++ Y K +++A +F ++ + SWN M+ +G+
Sbjct: 307 REVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKC 366
Query: 183 GQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
G ++ AL+LF +M E + N V++ I+ A G +E F M+E
Sbjct: 367 GMVDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKE 416
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 56 KEGRTDHA---RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTM 112
K GR H RK FD ++ + +I+ Y KCG +K+AR +FD++ ++ W M
Sbjct: 304 KWGREVHGFICRKGFDA----NVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAM 359
Query: 113 LNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
++ + +CGM+ A +LF ++ E + +V++
Sbjct: 360 IDCFGKCGMVDSALELF----------------------------TKMKEEGLQPNEVTF 391
Query: 173 NIMMGGYGQNGQIEKALDLFRRMPEPERNVVS---WNTIIKALVRCGRIEDA 221
++ +G +EK L++F M E + + I+ L R G+I +A
Sbjct: 392 ACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVEA 443
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 46/241 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERDT 106
+S I+ K ARKVFD+ P ++ MI+GY MI EA KLF +M E
Sbjct: 98 SSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRF 157
Query: 107 RLWTTMLNGYIECGMIKEARKL---FDGP----DAEKSVSTWSTMVNGYVKINQIEEAER 159
+ + + G + ++ E +L G E +S ++ + YVK ++E +
Sbjct: 158 FVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRK 217
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM-------PEP-------------- 198
+F E+ + ++WN M+ GY QNG + L+++R M P+P
Sbjct: 218 VFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLG 277
Query: 199 -----------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
N N +I RCG + A+ F+ M ER + V SWT I
Sbjct: 278 AQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAI 337
Query: 242 V 242
+
Sbjct: 338 I 338
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 19/225 (8%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F ++ NSF++ K G ++ RKVFD++ +D+ W+ MI+GY + G + ++
Sbjct: 190 FGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEI 249
Query: 98 FDQMAERD--TRLWTTMLNGYIEC------GMIKEARKLFDGPDAEKSVSTWSTMVNGYV 149
+ +M + T+L C G+ +E K D + + ++N Y
Sbjct: 250 YREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYA 309
Query: 150 KINQIEEAERLFYEMPERKD--VSWNIMMGGYGQNGQIEKALDLF----RRMPEPERNVV 203
+ + A +F M ER VSW ++GGYG +G+ E A++LF R +P+R V
Sbjct: 310 RCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTV- 368
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+ +++ A G E +F++M+ + + ++ +VD L
Sbjct: 369 -FVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLL 412
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 57/253 (22%)
Query: 24 IHGYPFLRTRLASTFSLNTEM---KRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDT 80
+HGY ++ F N + +RC G A K+F + + ++T
Sbjct: 292 LHGYIVRHELFSNGFVANALVGMYRRC----------GDMKSAFKIFSKFARKCAASYNT 341
Query: 81 MINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLF-----DG 131
MI GY++ G + +A++LF QM ERD W M++G+++ M +A LF +G
Sbjct: 342 MIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEG 401
Query: 132 --PDA-------------------------------EKSVSTWSTMVNGYVKINQIEEAE 158
PD+ + + +V Y K N I A+
Sbjct: 402 IEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQ 461
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCG 216
F E+ ER +WN ++ GY + QI K +L RM E NV +WN+I+ LV
Sbjct: 462 MAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENK 521
Query: 217 RIEDAQWHFNQMQ 229
+ + A FN+MQ
Sbjct: 522 QYDLAMQLFNEMQ 534
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----E 103
+ + CK A+ FD++ ERD W+ +I+GY +C I + R+L ++M E
Sbjct: 445 GALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFE 504
Query: 104 RDTRLWTTMLNGYIECGMIKEARKLFDG-------PDA------------------EKSV 138
+ W ++L G +E A +LF+ PD K V
Sbjct: 505 PNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQV 564
Query: 139 STWS-------------TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
+S T+V+ Y K I+ +++ ++ V N M+ Y +G
Sbjct: 565 HAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHG 624
Query: 186 EKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWT 239
E+ + +FRRM + P+ V++ +++ + V G I+ F M+ + +T
Sbjct: 625 EEGIVIFRRMLDSRVRPDH--VTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYT 682
Query: 240 TIVDCL 245
+VD L
Sbjct: 683 CMVDLL 688
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 50/236 (21%)
Query: 55 CKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWT 110
C G + R+V + + ++ + + +I+ Y KCG + EA+K+ + M ++D W
Sbjct: 145 CGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWN 204
Query: 111 TMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM--- 164
+++ + G++ EA L + + E +V TWS ++ G+ E+ LF M
Sbjct: 205 SIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGA 264
Query: 165 -------------PERKDVSW-----------------------NIMMGGYGQNGQIEKA 188
P + W N ++G Y + G ++ A
Sbjct: 265 GVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSA 324
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
+F + + S+NT+I + G + A+ F QM++ ERD SW ++
Sbjct: 325 FKIFSKF--ARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMI 378
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 99/213 (46%), Gaps = 33/213 (15%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+H+H + T + + F++T+L +S+N+ + A +FD+M
Sbjct: 53 LHSHSIKTG--FYNHNFVQTKLLQMYSINSSF----------------EDAWHMFDKMTL 94
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLF-----DQMAER-DTRLWTTMLNGYIECGMI---- 122
+++ W ++ ++ G+ + LF D + E+ D ++ +LN I CG+
Sbjct: 95 KNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLN--ICCGLGDLEL 152
Query: 123 -KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
++ + +V + +++ Y K ++EA+++ M ++ VSWN ++
Sbjct: 153 GRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVA 212
Query: 182 NGQIEKALDLFRRM--PEPERNVVSWNTIIKAL 212
NG + +ALDL M E E NVV+W+ +I
Sbjct: 213 NGVVYEALDLLENMLLSELEPNVVTWSAVIGGF 245
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 11/173 (6%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAE 135
+ ++ Y +CG +K A K+F + A + + TM+ GY+E G + +A++LF + E
Sbjct: 309 NALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVE 368
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDL 191
+ +W+ M++G+V ++A LF ++ E + ++ G+ I + ++
Sbjct: 369 RDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEI 428
Query: 192 --FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + N +++ +C I AQ F+++ ERD S+W ++
Sbjct: 429 HSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEIS--ERDTSTWNALI 479
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 118/221 (53%), Gaps = 27/221 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
N+ I +CK+ + A ++ +M + ++ + +I+G+ G +K+A LF+++
Sbjct: 207 NTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIIL 266
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKIN 152
+ D + +++G+ + +KE + +F PD V T++++++GY +
Sbjct: 267 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD----VVTYNSLMDGYCLVK 322
Query: 153 QIEEAERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWN 206
++ A+ +F M + D+ S+NI++ G+ + +++KA++LF M NVV++N
Sbjct: 323 EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYN 382
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
++I L + GRI A +QM +R ++ ++ +I+D L
Sbjct: 383 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 423
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA----ERD 105
+S G+ HA K+F Q+ +W+ MI Y ++ + ++QM E D
Sbjct: 54 LLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPD 113
Query: 106 TRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEEAERLFY 162
++ +L+ + G+++E +L A+ V + ++N Y +E+A +F
Sbjct: 114 GFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFD 173
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
+M +R VSWN ++ GY + G + A ++F + P RNVVSW T+I + G+ +A
Sbjct: 174 DMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEI--PVRNVVSWTTMIAGYAQNGKCVEAL 231
Query: 223 WHFNQMQ 229
F QM+
Sbjct: 232 SLFGQMR 238
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 45/210 (21%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG + + F +NT + I+ G + AR VFD M +R + W++++
Sbjct: 136 LHGIVLAKGYCSDVF-VNTNL------INFYADCGGVEQARYVFDDMTQRSVVSWNSLLV 188
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD------------- 130
GY+KCG AR +F+++ R+ WTTM+ GY + G EA LF
Sbjct: 189 GYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVV 248
Query: 131 -----GPDAE--------------------KSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
AE SV + +++ Y I+EA R+F +M
Sbjct: 249 LVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMS 308
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ VSW I++ + + G ++ALDLF+ M
Sbjct: 309 WKTTVSWTIIIMAFAKQGLGKEALDLFKDM 338
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTML 113
L +EG H V + D+ + +IN Y CG +++AR +FD M +R W ++L
Sbjct: 129 LVREGEQLHG-IVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLL 187
Query: 114 NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM----PERKD 169
GY++CG AR +F+ ++V +W+TM+ GY + + EA LF +M E
Sbjct: 188 VGYVKCGDFDAARNVFEEIPV-RNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQ 246
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQ 227
V ++ + G ++ + + E +R +V N ++ CG I++A F +
Sbjct: 247 VVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMFTK 306
Query: 228 MQERERDVSSWTTIV 242
M + SWT I+
Sbjct: 307 MS--WKTTVSWTIII 319
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 115/218 (52%), Gaps = 23/218 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLW------DTMINGYIKCGMIKEARKLFDQM 101
N+++ LCK G+ D AR+V ++M R R+W TMI+G K ++++A L+++M
Sbjct: 323 NTYLDTLCKGGQIDLARRVLEEMSSR--RVWPTVVTYSTMIDGCAKANLLEDALNLYEEM 380
Query: 102 AERDTRL----WTTMLNGYIECGMIKEAR---KLFDGPDAEKSVSTWSTMVNGYVKINQI 154
R + + TM+ Y + G EA K + ++ V T++ +++GY +
Sbjct: 381 KLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMY 440
Query: 155 EEAERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFR--RMPEPERNVVSWNTI 208
+E RLF EM ++++ M+ Y + G ++A+D+++ + + E +VV + +I
Sbjct: 441 DEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSI 500
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDC 244
I +L + G +E + M E+ + +V ++ +I+D
Sbjct: 501 IDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 48 NSFISRLCK-EGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA 102
NS I K E D K FD+M D ++++++ GM + A+KL +M
Sbjct: 252 NSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMD 311
Query: 103 E----RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIE 155
+ RD + T L+ + G I AR++ + + + +V T+STM++G K N +E
Sbjct: 312 QKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLE 371
Query: 156 EAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTII 209
+A L+ EM R VS+N M+G Y + G+ ++A+ + M +R+VV++N ++
Sbjct: 372 DALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALL 431
Query: 210 KALVRCGRIEDAQWHFNQMQ 229
R G ++ + F +M+
Sbjct: 432 SGYGRYGMYDEVRRLFEEMK 451
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 100/183 (54%), Gaps = 15/183 (8%)
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEARKLFDG-- 131
+ +I+G+ G ++EA LF +M + NG ++ G I+EA+ + +
Sbjct: 34 YTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMM 93
Query: 132 -PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIE 186
D + V +S+++NGY +N++ +A+ +F M ER+ DV S+NIM+ + + ++
Sbjct: 94 EKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVD 153
Query: 187 KALDLFRRMPEPE--RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIV 242
+A+ LF MP + +VV+++T+I L + GR+ A ++M +R ++ ++ IV
Sbjct: 154 EAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIV 213
Query: 243 DCL 245
D L
Sbjct: 214 DVL 216
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N + N + CKEG+ + A+ V + M E+D++ + +++NGY + +A
Sbjct: 61 NINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKA 120
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWST 143
+ +F MAER D R + M+N + + M+ EA KLF+ PD V T+ T
Sbjct: 121 QSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPD----VVTYHT 176
Query: 144 MVNGYVKINQIEEAERLFYEMPER 167
+++G K ++ A L EM +R
Sbjct: 177 LIDGLCKSGRLSYAMELVDEMDDR 200
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 61/269 (22%)
Query: 31 RTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYI 86
R +AS F+ N I L E R + A + +M E+ D+ ++ INGY
Sbjct: 351 RGIVASVFTYNL-------LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYC 403
Query: 87 KCGMIKEARKLFDQMAERDTR--------------------------------------- 107
+CG K+A LFD+M E++ R
Sbjct: 404 RCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDII 463
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEM 164
++ +++G+ G I A +L D K V T++T++ GY + ++EEA++L EM
Sbjct: 464 MFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEM 523
Query: 165 PER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRI 218
ER +S+N ++ GY + G ++ AL++F M + ++++N +I+ + G
Sbjct: 524 KERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEA 583
Query: 219 EDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+ A+ +MQ + D S++ +++ +
Sbjct: 584 DHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 110/216 (50%), Gaps = 23/216 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I C +G D A D+M R + ++ +I+ I+EA + +M E
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + +NGY CG K+A LFD + +V T++++++ + K N++ E
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445
Query: 157 AERLFYE------MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTI 208
AE F + +P+ + +N ++ G+ NG I++A L + M + + V++NT+
Sbjct: 446 AEEKFKKSIKEGMLPDI--IMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTL 503
Query: 209 IKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
++ R ++E+A+ ++M+ER + D S+ T++
Sbjct: 504 MQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLI 539
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ LC+EG+ A+ M + ++ ++T+INGY G + A K+F M +
Sbjct: 221 NIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKD 280
Query: 104 RDTRLWTTMLNGYIECGMIKEAR---------KLFDGPDAEKSVSTWSTMVNGYVKINQI 154
++ + N +I + KE R KL + +V T++ +++G +
Sbjct: 281 KNLKPDCYTYNSFIS-RLCKERRIEEASGVLCKLLESGLVPNAV-TYNALIDGCCNKGDL 338
Query: 155 EEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTI 208
++A EM R V ++N+++ +IE+A D+ + M E E +VV++N
Sbjct: 339 DKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQ 398
Query: 209 IKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVD 243
I RCG + A F++M E+ V ++T+++D
Sbjct: 399 INGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLID 435
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 111/253 (43%), Gaps = 48/253 (18%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
++++ +S I+ K G AR+VFD+ R++ W ++++GY CG++ E R +FD+
Sbjct: 137 SSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDK 196
Query: 101 MAERDTRLWTTMLNGYIECGMIKE---------------ARKLFDGP------------- 132
M +R+ + M++GY+ E AR F+G
Sbjct: 197 MPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMG 256
Query: 133 ---------------DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMG 177
E + + +++ Y K +++AE++F +M + +W+ M+
Sbjct: 257 AFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMIL 316
Query: 178 GYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER-- 233
G NG + AL+LF +M + P+ N V++ ++ A ++ F M E+
Sbjct: 317 GLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNIT 376
Query: 234 -DVSSWTTIVDCL 245
+ + IVD L
Sbjct: 377 PSIEHYGCIVDIL 389
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTML 113
G +A +F MP ++ ++++I Y ++ +F +M + R +TT++
Sbjct: 56 GDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLV 115
Query: 114 NGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+ +++ L V S+++N + K I A ++F E R V W
Sbjct: 116 KSCVTLSSLEQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWT 175
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
++ GY G + + D+F +M P+RN S + ++ VR + F +++++++
Sbjct: 176 SLVSGYCSCGLVNEVRDVFDKM--PQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDK 233
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N + N I C++G+ A+ +F+ M +R D+ ++T+I+G+ G + EA
Sbjct: 262 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 321
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNG 147
RKLFD + ER D +T ++ GY +C I EA LF+ + + +S++++G
Sbjct: 322 RKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 381
Query: 148 YVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I A LF + P +++NI++ + + I+ ++LF+ M
Sbjct: 382 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 441
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
V+++N +I + RI +A + MQ + S T
Sbjct: 442 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSIT 479
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 52/219 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS C G ARK+FD + ER D+ + +I GY KC I EA LF++M
Sbjct: 306 NTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRC 365
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF-----DGP-----------DA--------- 134
+ D L++++++G + G I A +LF DGP DA
Sbjct: 366 KNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDM 425
Query: 135 -------------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMG 177
+V T++ ++NGY K +I EA L M + +++N +
Sbjct: 426 GIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFD 485
Query: 178 GYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVR 214
G ++G+I A +LF+ M P +V ++N ++ A +
Sbjct: 486 GLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 524
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQM----AERD 105
LC G A D + + M L + T+ING K G +A +L +M + +
Sbjct: 137 LCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN 196
Query: 106 TRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
++ +++ + + + +AR L+ G D + + T+++++ G+ + Q E ++L
Sbjct: 197 IVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPD--ILTYTSLIRGFCRTGQWGEVKQL 254
Query: 161 FYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVR 214
EM + ++N+++ + + G++ +A +F M + + ++V++NT+I
Sbjct: 255 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 314
Query: 215 CGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
G + +A+ F+ + ER DV S+T ++
Sbjct: 315 HGNVLEARKLFDTVFERGILPDVWSYTILI 344
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N + N I C++G+ A+ +F+ M +R D+ ++T+I+G+ G + EA
Sbjct: 262 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 321
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNG 147
RKLFD + ER D +T ++ GY +C I EA LF+ + + +S++++G
Sbjct: 322 RKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 381
Query: 148 YVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I A LF + P +++NI++ + + I+ ++LF+ M
Sbjct: 382 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 441
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
V+++N +I + RI +A + MQ + S T
Sbjct: 442 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSIT 479
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 52/219 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS C G ARK+FD + ER D+ + +I GY KC I EA LF++M
Sbjct: 306 NTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRC 365
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF-----DGP-----------DA--------- 134
+ D L++++++G + G I A +LF DGP DA
Sbjct: 366 KNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDM 425
Query: 135 -------------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMG 177
+V T++ ++NGY K +I EA L M + +++N +
Sbjct: 426 GIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFD 485
Query: 178 GYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVR 214
G ++G+I A +LF+ M P +V ++N ++ A +
Sbjct: 486 GLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 524
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 54 LCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQM----AERD 105
LC G A D + + M L + T+ING K G +A +L +M + +
Sbjct: 137 LCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN 196
Query: 106 TRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
++ +++ + + + +AR L+ G D + + T+++++ G+ + Q E ++L
Sbjct: 197 IVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPD--ILTYTSLIRGFCRTGQWGEVKQL 254
Query: 161 FYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVR 214
EM + ++N+++ + + G++ +A +F M + + ++V++NT+I
Sbjct: 255 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 314
Query: 215 CGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
G + +A+ F+ + ER DV S+T ++
Sbjct: 315 HGNVLEARKLFDTVFERGILPDVWSYTILI 344
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 116/217 (53%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
N+ I +CK + A +F +M + D+ + +I+G+ G + +A LF++M
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + ++N + + G +KE + +FD + + T++++++GY + ++ +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 157 AERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A+ +F M + D+ S++IM+ G+ + + ++A++LF+ M +VV+++++I
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + GRI A +QM +R + ++ +I+D L
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 114/214 (53%), Gaps = 27/214 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ IS C G+ + A +F++M + D+ ++ ++N + K G +KE + +FD M +
Sbjct: 264 SALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + + ++++GY + +A+ +F+ PD + ++S M+NG+ KI
Sbjct: 324 QGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD----IQSYSIMINGFCKIK 379
Query: 153 QIEEAERLFYEMPERKD-----VSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSW 205
+ +EA LF EM RK+ V+++ ++ G ++G+I AL L +M + + ++
Sbjct: 380 KFDEAMNLFKEM-HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTY 438
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
N+I+ AL + +++ A +++++ + +T
Sbjct: 439 NSILDALCKIHQVDKAIALLTKLKDKGIQPNMYT 472
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 114/218 (52%), Gaps = 27/218 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N ++ CK+G+ + VFD M ++ ++ ++++++GY + +A+ +F+ MA+
Sbjct: 299 NILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKIN 152
D + ++ M+NG+ + EA LF PD V T+S++++G K
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD----VVTYSSLIDGLSKSG 414
Query: 153 QIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWN 206
+I A +L +M +R ++N ++ + Q++KA+ L ++ + + N+ +++
Sbjct: 415 RISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYS 474
Query: 207 TIIKALVRCGRIEDAQWHFNQM--QERERDVSSWTTIV 242
+IK L + G++EDA+ F + + +V ++T ++
Sbjct: 475 ILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMI 512
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
+N +++ + I+ CK + D A +F +M + D+ + ++I+G K G I A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 95 RKLFDQMAERDT----RLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNG 147
+L DQM +R R + ++L+ + + +A L + ++ T+S ++ G
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
Query: 148 YVKINQIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPE 197
+ ++E+A ++F + + ++ IM+ G+ G +AL L +M +
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMED 533
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + K G A +F+++ + + W+ MI G+ + G+ EA LFD+M +
Sbjct: 444 NSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLE 503
Query: 108 L-WTTMLN--------GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
+ T L+ GY++ G + + G + + T +V+ Y K ++ A+
Sbjct: 504 INKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDT--ALVDMYAKCGDLQTAQ 561
Query: 159 RLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCG 216
++F + E+ VSW+ M+ +G +GQI A LF +M + N V++ I+ A G
Sbjct: 562 KVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAG 621
Query: 217 RIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
+++ +++FN M++ +V + +IVD L
Sbjct: 622 SVKEGKFYFNTMRDYYGIVPNVEHFASIVDLL 653
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIE-CGM 121
A+KVFD+M RD+ LW ++I+ Y++ G+ +E ++F M R + ML E CG
Sbjct: 156 AKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGK 215
Query: 122 IKEAR--------KLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
I R + +G + S+S ++++ Y + + A+RLF + +R W
Sbjct: 216 IGCLRLAKSVHGYVMREGMVGDGSLS--NSLIVMYSQCGYLCRAKRLFECIDDRSTSCWT 273
Query: 174 IMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQ 222
M+ Y QN E+ALD+F +M E E N V+ +++ + R GR+++ +
Sbjct: 274 SMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGK 324
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 101/199 (50%), Gaps = 17/199 (8%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMA--- 102
I CK G D A F +M E +R ++++ING+ K G + A L+ +M
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458
Query: 103 -ERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
E +TT+++GY + +++A KL+ + + SV T++ ++ G N++ EA
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518
Query: 159 RLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKAL 212
+LF EM ERK +V++N+M+ GY + ++KA +L M + ++ +I L
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578
Query: 213 VRCGRIEDAQWHFNQMQER 231
GR+ A+ + + ++
Sbjct: 579 CSTGRVSAAKDFIDDLHKK 597
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 53/246 (21%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEA----------- 94
IS LC GR A+ D + +++++L + +++GY G + EA
Sbjct: 574 LISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633
Query: 95 ----------------------------RKLFDQMAERDTRLWTTMLNGYIECGMIKEAR 126
+K++DQ D+ ++T+M++ Y + G K++
Sbjct: 634 INMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSG 693
Query: 127 KLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGY 179
+ D EK +V T++ +NG K+ +I+ A LF +M V++ +
Sbjct: 694 ECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSL 753
Query: 180 GQNGQIEKALDLFRRMPEP-ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVS 236
+ G +++A DL M + N ++N +I+ + GR+ +A ++M E D
Sbjct: 754 TKEGNMKEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCI 813
Query: 237 SWTTIV 242
+++TI+
Sbjct: 814 TYSTII 819
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 120/218 (55%), Gaps = 21/218 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK+ ++ +M + D ++T+I G+ G +KEA L ++M
Sbjct: 199 NTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTL 258
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
++ ++ +++ + G +K+AR + E +++T+S++++G + ++ +
Sbjct: 259 KNVNPNVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNK 318
Query: 157 AERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A +F + R DV S+++M+ G+ +N +++A++LF+ M N V++N++I
Sbjct: 319 ATYVFNTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLID 378
Query: 211 ALVRCGRIEDAQWHF-NQMQERER--DVSSWTTIVDCL 245
L + GR+ DA W F ++M +R + ++ ++++++D L
Sbjct: 379 GLCKLGRMSDA-WDFIDEMHDRGQPANIITYSSLLDGL 415
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF----D 99
NS I LCK GR A D+M +R ++ + ++++G K + +A L +
Sbjct: 374 NSLIDGLCKLGRMSDAWDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKN 433
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
Q + D +T +++G + G +++A++++ ++ M+NG K +E
Sbjct: 434 QGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTVMINGLCKEGFFDE 493
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
A L +M + V++ I++ +N + +KA+ L R M
Sbjct: 494 ALSLLSKMEDNGCTPDGVTYEIIIRALFENNRNDKAVKLIREM 536
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I+ LCK G+T A ++F +M + ++ +++T+I+G K G++ EA L +M E
Sbjct: 180 TIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVEN 239
Query: 105 DTRL----WTTMLNGYIECGMIKEARKLFDG--------PDAEKSVSTWSTMVNGYVKIN 152
L + +M++G+ G + A KL D PD V T++ +++G K+
Sbjct: 240 GIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD----VYTFNILIDGLCKLG 295
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWN 206
++ EA + M +R VS+N +M GY +G + +A +F +M E NV+S+
Sbjct: 296 RVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYC 355
Query: 207 TIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
T+I + +++A +M + D ++ ++D L
Sbjct: 356 TLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGL 396
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I LCK GR A V M +R D+ ++ ++NGY G + EA+++FD+M E
Sbjct: 285 NILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVE 344
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQ--- 153
R + + T++NGY + M+ EA L + T++ +++G K +
Sbjct: 345 RTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLY 404
Query: 154 ---IEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTI 208
+ EA R + + +++N+++ Y ++ + +KAL LF+ + E N+ ++N +
Sbjct: 405 EWDLVEAMRASGQPADL--ITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462
Query: 209 IKALVRCGRIEDAQWHFNQMQER 231
+ L + GR++ A+ F + +
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAK 485
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LCK G A ++ M + D ++ T+I+G+ K G + A KLFD+M
Sbjct: 316 NNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRR 375
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
+ D +T++++G + G + EAR++F+ E T++ +++GY K +++E
Sbjct: 376 KKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKE 435
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A + +M ++ V++ + G +NG+I+ A +L M + NV ++NTI+
Sbjct: 436 AFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVN 495
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
L + G IE +M D ++TT++D
Sbjct: 496 GLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 49 SFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I +CK G+ AR++F++M E D + +I+GY K G +KEA + +QM ++
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK 446
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +T + +G + G I A +L + +V T++T+VNG KI IE+
Sbjct: 447 GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQT 506
Query: 158 ERLFYEM------PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTII 209
+L EM P+ +++ +M Y + G++ KA +L R M + +V++N ++
Sbjct: 507 VKLMEEMDLAGFYPD--TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLM 564
Query: 210 KALVRCGRIEDAQWHFNQMQER 231
G +ED + M E+
Sbjct: 565 NGFCMSGMLEDGERLIEWMLEK 586
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 54/253 (21%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPER--------------------------------- 73
CN + LC+ G+ A + QM +R
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304
Query: 74 ------DMRLWDTMINGYIKCGMIKEARKLFDQMAE----RDTRLWTTMLNGYIECGMIK 123
D +++ +I K G + EA +L M + D ++TT+++G+ + G +
Sbjct: 305 GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVS 364
Query: 124 EARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNIMM 176
A KLFD +K V T++++++G K ++ EA +F EM E +V++ ++
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424
Query: 177 GGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--E 232
GY + G++++A + +M + NVV++ + L + G I+ A ++M + +
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484
Query: 233 RDVSSWTTIVDCL 245
+V ++ TIV+ L
Sbjct: 485 PNVYTYNTIVNGL 497
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 105/191 (54%), Gaps = 17/191 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS + + A +F++M D+ ++ +++G+ K G +KEA+ + M +
Sbjct: 38 NALISGFSAVSKLNDAIGLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIK 97
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEE 156
D + ++++++GY + +A+++FD A +V +++TM+NG+ KI ++E
Sbjct: 98 DDIKPRVVTYSSLMDGYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDE 157
Query: 157 AERLFYEMPERKDVS----WNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A LF EM RK + ++ ++ G ++G+I AL L M + + N+V +++I+
Sbjct: 158 AINLFEEMRCRKIIRNVLIYSFLIDGLCKSGRISYALKLVDEMHDRGQPPNIVIYSSILD 217
Query: 211 ALVRCGRIEDA 221
AL + R++ A
Sbjct: 218 ALCKNHRVDQA 228
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 114/216 (52%), Gaps = 19/216 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I LCK + A ++ +M + D+ ++ +I+G+ + +A LF++M
Sbjct: 4 TIIDSLCKYKLVNDAFDLYSEMVAKRIGLDVFTYNALISGFSAVSKLNDAIGLFNKMTAE 63
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEA 157
D + +++G+ + G +KEA+ + D + V T+S++++GY IN++ +A
Sbjct: 64 NINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVNKA 123
Query: 158 ERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKA 211
+ +F M R + S+ M+ G+ + +++A++LF M + RNV+ ++ +I
Sbjct: 124 KEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLIDG 183
Query: 212 LVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
L + GRI A ++M +R + ++ +++I+D L
Sbjct: 184 LCKSGRISYALKLVDEMHDRGQPPNIVIYSSILDAL 219
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 89/168 (52%), Gaps = 15/168 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N ++ N + CK+GR A+ V M + D++ + ++++GY + +A
Sbjct: 64 NINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEVNKA 123
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+++FD MA R + + +TTM+NG+ + M+ EA LF+ K +V +S +++G
Sbjct: 124 KEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNVLIYSFLIDG 183
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDL 191
K +I A +L EM +R V ++ ++ +N ++++A+ L
Sbjct: 184 LCKSGRISYALKLVDEMHDRGQPPNIVIYSSILDALCKNHRVDQAIAL 231
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 43/222 (19%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F L ++ + + G A K+FD+MPE+ + + TM+ Y K G + EAR L
Sbjct: 147 FGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLL 206
Query: 98 FDQM-AERDTRLWTTMLNGYIECGMIKEARKLF--------------------------- 129
FD M RD +W M++GY + G E LF
Sbjct: 207 FDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGA 266
Query: 130 ------------DGPD--AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+G D V + +V+ Y K +E+A ++F ++ + V+WN M
Sbjct: 267 LESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSM 326
Query: 176 MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
+ GY NG E+AL LF M E S+ T I L CG
Sbjct: 327 IMGYAVNGLSEEALKLFHEM-HGEGVRPSYVTFIALLTACGH 367
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 45/251 (17%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM 70
+L+ K TH L +R L LN +++R R G +++ +F++
Sbjct: 29 VLIDKSKSKTHLLQIHASLVRRNLDDHTILNFKLQR------RYSSLGHLNYSVTLFNRT 82
Query: 71 PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-------------------------- 104
RD+ W ++I+ + + + +A + QM
Sbjct: 83 RNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLLNGSTIQPIKSIHC 142
Query: 105 ---------DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
DT + T +++GY G A KLFD EKS+ +++TM+ Y K ++
Sbjct: 143 HVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFD-KMPEKSLISFTTMLMCYAKHGKLL 201
Query: 156 EAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKAL 212
EA LF M +D V WN+M+ GY QNG + L LFRRM + + NV++ ++ +
Sbjct: 202 EARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSC 261
Query: 213 VRCGRIEDAQW 223
+ G +E +W
Sbjct: 262 GQVGALESGRW 272
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 74 DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
D + +++GY + G A KLFD+M E+ +TTML Y + G + EAR LFDG +
Sbjct: 152 DTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGME 211
Query: 134 AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM-----MGGYGQNGQIEKA 188
+ V W+ M++GY + E LF M K V N++ + GQ G +E
Sbjct: 212 GNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEK-VKPNVITLLPVLSSCGQVGALESG 270
Query: 189 LDLFRRMPEPE-----RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ + + V ++ +CG +EDA+ F+++ +DV +W +++
Sbjct: 271 RWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKID--GKDVVAWNSMI 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 17/144 (11%)
Query: 80 TMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF---DGPDAEK 136
+++ Y KCG +++ARK+FD++ +D W +M+ GY G+ +EA KLF G
Sbjct: 294 ALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRP 353
Query: 137 SVSTWSTMVNGYVKINQIEEAERLF------YEMPERKDVSWNIMMGGYGQNGQIEKALD 190
S T+ ++ + + +F Y+M R + + M+ G+ G++++A D
Sbjct: 354 SYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVE-HFGCMVNLLGRAGRLQEAYD 412
Query: 191 LFRRM---PEPERNVVSWNTIIKA 211
L R M P+P V W T++ A
Sbjct: 413 LVRSMKIDPDP----VIWGTLLWA 432
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 16/214 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF-----DQMA 102
N ++ R EG R + ++ R++ ++ GY K G + EA KL D++
Sbjct: 269 NGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELL 328
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAER 159
D R++ +++GY + G +++A ++ D + ++ +T++ GY K+ Q+ EAER
Sbjct: 329 VVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAER 388
Query: 160 LFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALV 213
+F M + + D S+N ++ GY + G++ KA L M VV++NT+IK LV
Sbjct: 389 VFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLV 448
Query: 214 RCGRIEDA--QWHFNQMQERERDVSSWTTIVDCL 245
G +DA WH + + S T++DC
Sbjct: 449 DVGSYDDALHLWHLMVERGVTPNEISCCTMLDCF 482
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 37 TFSLNTEMKRCNSFISRLCKE----GRTDHARKVFDQMPE----RDMRLWDTMINGYIKC 88
FS+ E C+ L K G T HA VFD+M +R ++ ++
Sbjct: 145 VFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQK 204
Query: 89 GMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTW 141
G + A +FDQ+ D + + ++N + + G + A ++ + E +V T+
Sbjct: 205 GEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTY 264
Query: 142 STMVNGYVKINQIEEAERLFYEMPE----RKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+ +VNGYV E ER+ M E R V+ ++M GY + G++++A L R + E
Sbjct: 265 NGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEE 324
Query: 198 PERNVVS---WNTIIKALVRCGRIEDA 221
E VV + ++ + GR+EDA
Sbjct: 325 DELLVVDERVYGVLVDGYCQMGRMEDA 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 47 CNSFISRLCKEGRTDHA----RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
C + + K G +D A +++ + + ++TMI+G K G + EA +FD+M
Sbjct: 475 CCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMK 534
Query: 103 ER----DTRLWTTMLNGYIECGMIKEA---RKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
E D + T+ +GY + G ++EA + + + S+ ++++++G KI ++
Sbjct: 535 ELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLN 594
Query: 156 EAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTII 209
+ L EM R V++ ++ G+ +++KA L+ M E NVV + I+
Sbjct: 595 DVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIV 654
Query: 210 KALVRCGRIEDAQWHFNQMQE 230
+L R RI +A ++M +
Sbjct: 655 SSLYRDDRISEATVILDKMLD 675
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDM-------RLWDTMINGYIKCGMIKEARKLFDQ 100
N +L K T A+K+ D + + D+ +++ I+G K G + EAR +
Sbjct: 683 NKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSV 742
Query: 101 MAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK----SVSTWSTMVNGYVKIN 152
+ R D + T+++ G + EA KL D EK +++ ++ ++NG K+
Sbjct: 743 LMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRD-EMLEKGLIPNITIYNALINGLCKLG 801
Query: 153 QIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
I+ A+RLFY++ ++ V++NI++G Y + G ++KA L +M E
Sbjct: 802 NIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTE 850
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 38/202 (18%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEA 94
L M CN+ I CK G+ A +VF M + D ++T+++GY + G + +A
Sbjct: 362 GLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQI 154
L ++M G +V T++T++ G V +
Sbjct: 422 FMLCEEML----------------------------GDGITPTVVTYNTVIKGLVDVGSY 453
Query: 155 EEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTI 208
++A L++ M ER ++S M+ + + G ++A+ L++ + ++ V++NT+
Sbjct: 454 DDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTM 513
Query: 209 IKALVRCGRIEDAQWHFNQMQE 230
I L + G++ +A F++M+E
Sbjct: 514 ISGLCKMGKLMEAGAVFDRMKE 535
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N + N I C++G+ A+ +F+ M +R D+ ++T+I+G+ G + EA
Sbjct: 246 NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEA 305
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNG 147
RKLFD + ER D +T ++ GY +C I EA LF+ + + +S++++G
Sbjct: 306 RKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDG 365
Query: 148 YVKINQIEEAERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I A LF + P +++NI++ + + I+ ++LF+ M
Sbjct: 366 LCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPT 425
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
V+++N +I + RI +A + MQ + S T
Sbjct: 426 VLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSIT 463
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 52/219 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS C G ARK+FD + ER D+ + +I GY KC I EA LF++M
Sbjct: 290 NTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRC 349
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF-----DGP-----------DA--------- 134
+ D L++++++G + G I A +LF DGP DA
Sbjct: 350 KNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDM 409
Query: 135 -------------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMG 177
+V T++ ++NGY K +I EA L M + +++N +
Sbjct: 410 GIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFD 469
Query: 178 GYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVR 214
G ++G+I A +LF+ M P +V ++N ++ A +
Sbjct: 470 GLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 508
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 112/240 (46%), Gaps = 30/240 (12%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL----WD 79
+ G R + +L T MK LC G A D + + M L +
Sbjct: 98 VLGIVLKRGYQPNNITLTTVMKG-------LCINGEVQKAMDFHDNVAAQGMLLDEVCYG 150
Query: 80 TMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFD----- 130
T+ING K G +A +L +M + + ++ +++ + + + +AR L+
Sbjct: 151 TLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDM 210
Query: 131 GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIE 186
G D + + T+++++ G+ + Q E ++L EM + ++N+++ + + G++
Sbjct: 211 GIDPD--ILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 268
Query: 187 KALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIV 242
+A +F M + + ++V++NT+I G + +A+ F+ + ER DV S+T ++
Sbjct: 269 EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI 328
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 109/221 (49%), Gaps = 17/221 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N +M N + CKEG+ A+ V M ++ M+ + +++GY + +A
Sbjct: 107 NINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKA 166
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +F+ MA+ D ++ ++NG + M EA LF+ K V T++++++G
Sbjct: 167 KSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDG 226
Query: 148 YVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I A +L EM +R ++++ ++ +N Q++KA+ L + + N
Sbjct: 227 LCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPN 286
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ ++ +I L + GR+EDA F + + +++ T V
Sbjct: 287 MYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 117/217 (53%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
N+ I +CK+ + A ++ +M + D+ ++ +I+G+ G +K+A LF++M
Sbjct: 46 NTIIDGMCKDKHVNDAFDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTL 105
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
D + +++ + + G +KEA+ + + +V T+S +++GY + ++ +
Sbjct: 106 ENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNK 165
Query: 157 AERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIK 210
A+ +F M + D+ S++I++ G + ++A++LF M + +VV++N++I
Sbjct: 166 AKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLID 225
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + G+I A ++M +R D+ ++++I+D L
Sbjct: 226 GLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDAL 262
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 114/221 (51%), Gaps = 27/221 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS C G+ A +F++M DM ++ +++ + K G +KEA+ + M +
Sbjct: 81 NALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMK 140
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKIN 152
+ + ++ +++GY + +A+ +F+ PD + ++S ++NG KI
Sbjct: 141 QGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPD----IHSYSILINGLCKIK 196
Query: 153 QIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWN 206
+EA LF EM RK V++N ++ G ++G+I AL L M + ++++++
Sbjct: 197 MTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYS 256
Query: 207 TIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+I+ AL + +++ A ++++ ++ ++T ++D L
Sbjct: 257 SILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGL 297
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I LCK G+ +A K+ D+M +R D+ + ++++ K + +A L + +
Sbjct: 221 NSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKD 280
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
+ R +T +++G + G +++A +F+ + +V+T++ M++G+ +E
Sbjct: 281 QGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDE 340
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRM 195
A L +M + +++ I++ + +KA L R M
Sbjct: 341 ALALLSKMKDNSCFPNALTYEIIIRSLFDKDENDKAEKLLREM 383
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 15 AHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD 74
++L+ +HG L F ++ + ++ + K G +AR++F ++P +
Sbjct: 177 VYELSLSQQVHG-------LVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPN 229
Query: 75 MRLWDTMINGYIKCGMIKEARKLFDQMAERDTR-LWTTMLNGYIECGMIKEARKLFDGPD 133
W+ ++ Y+ G KEA LF +M + L T N + C L +G
Sbjct: 230 AVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVAC---SSMHALEEGMQ 286
Query: 134 AEKSVSTW---------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ 184
V W S+++N YVK ++E R+F+++ + V W ++ GY +G+
Sbjct: 287 IHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAMSGK 346
Query: 185 IEKALDLFRRMPEPERNVVSWNTIIKALVR 214
A LF +M P RNV+SWN ++ R
Sbjct: 347 TWDARKLFDQM--PVRNVISWNAMLAGYTR 374
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL----WTTMLNG--- 115
A+++FD+MP+RD W+ +I Y + EA LF M + R + ++L
Sbjct: 117 AQELFDEMPQRDGGSWNALITAYSRLRYPDEAISLFLWMNKDGVRANNITFASVLGSCAD 176
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
E + ++ L +V S +V+ Y K + A R+F+E+P V+WN++
Sbjct: 177 VYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVI 236
Query: 176 MGGYGQNGQIEKALDLFRRM----------------------------PEPERNVVSW-- 205
+ Y G ++A+ LF RM + VV W
Sbjct: 237 VRRYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVACSSMHALEEGMQIHGGVVKWGL 296
Query: 206 -------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
+++I V+CG +E+ F+Q+ +D+ WT IV
Sbjct: 297 HEDTVVSSSLINMYVKCGELENGFRVFHQLG--SKDLVCWTCIVS 339
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
+S I+ K G ++ +VF Q+ +D+ W +++GY G +ARKLFDQM R+
Sbjct: 304 SSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAMSGKTWDARKLFDQMPVRNVI 363
Query: 108 LWTTMLNGYIECGMIKEARKLFD-GPDAEKSVS--TWSTMVNGYVKINQIEEAERLFYEM 164
W ML GY EA D K + T M+N + E ++L +
Sbjct: 364 SWNAMLAGYTRFFKWSEALDFVCLMLDTVKDLDHVTLGLMINVSAGLLDHEMGKQL-HGF 422
Query: 165 PERKDVSWNIMMGG-----YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
R N+M+G YG+ G + A F M R+ VSWN ++ + E
Sbjct: 423 VYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNLMSN-WRDRVSWNALLASCGLHHSSE 481
Query: 220 DAQWHFNQMQ 229
F++MQ
Sbjct: 482 QTLTMFSEMQ 491
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD--GPDAEK 136
+++ Y KCG++ AR++F ++ + W ++ Y++ G KEA LF D K
Sbjct: 203 SALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVK 262
Query: 137 SVS-TWSTMVNGYVKINQIEEAERLF-----YEMPERKDVSWNIMMGGYGQNGQIEKALD 190
++ T+S + ++ +EE ++ + + E VS + ++ Y + G++E
Sbjct: 263 PLNFTFSNALVACSSMHALEEGMQIHGGVVKWGLHEDTVVS-SSLINMYVKCGELENGFR 321
Query: 191 LFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+F ++ +++V W I+ G+ DA+ F+QM R+V SW ++
Sbjct: 322 VFHQLGS--KDLVCWTCIVSGYAMSGKTWDARKLFDQMP--VRNVISWNAML 369
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 108/217 (49%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ + C AR++F++M +R D+ ++ +I+GY K M+ EA LF ++
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 104 RD----TRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
++ + ++++G G I +KL D G V T++ +++ K +I E
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A + M ++ V++N MM GY + A D+F RM + E +++++N +I
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
+ +++A F +M+ + D++S+ +++D L
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I LC GR H +K+ D+M D+ ++ +I+ K G I EA + M +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + + M++GY + A+ +F+ E + ++ ++NGY K ++E
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A LF EM + + S+N ++ G G+I +L M + + +V+++N ++
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
A + + A F Q+ E
Sbjct: 554 AFCKTQPFDKAISLFRQIVE 573
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 119/253 (47%), Gaps = 24/253 (9%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT----DHARKV 66
IL++ + +H + L T L S + N + N+ I+ C G D + +
Sbjct: 95 ILINCYFHQSHTAF-AFSLLATILKSGYQPN--LVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 67 FDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMI 122
Q D + T+ING K G IK A L +M + + +++ +++G + G +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211
Query: 123 KEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNI 174
+A L E+ + T++++++G + + +E +L +M + D ++NI
Sbjct: 212 SDALGLC-SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 175 MMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER- 231
++ + G+I +A + M + + ++V++N +++ + +A+ FN+M +R
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 232 -ERDVSSWTTIVD 243
E DV ++ ++D
Sbjct: 331 LEPDVLNYNVLID 343
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 12/209 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERD-- 105
NS I K + + + ++F++ ERD+ LW+ +I+ +I +EA LFD M D
Sbjct: 455 NSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQN 513
Query: 106 --TRLWTTMLNGYIECGMIKEARKL---FDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
T +L+ +++ +L + + ++ + +V+ Y K Q+E++ +
Sbjct: 514 PNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREV 573
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRI 218
F M E+ + WN M+ GYG NG E A+++F M E + N +++ +++ A G +
Sbjct: 574 FDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLV 633
Query: 219 EDAQWHFNQMQER--ERDVSSWTTIVDCL 245
E+ + F +MQ + ++ +T +VD L
Sbjct: 634 EEGKNVFAKMQSYSVKPNLKHYTCMVDLL 662
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
+S +S CK G A + F ++ +D+ W +MI Y + GM+ + + F +M E
Sbjct: 254 SSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVC 313
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIEEAER 159
D + +L+G+ + K F G + + +++++ Y K + AER
Sbjct: 314 PDGMVIGCILSGFGN-SVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAER 372
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
LF + + WN M+ GYG+ G+ K + LFR M S I+ A+ CG++
Sbjct: 373 LF-QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVG-IVSAIASCGQL 429
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCG-------MIKEARKLFDQ 100
+SF+S + + A KVFD++P RD+ W ++ GY++ G I E ++ D
Sbjct: 150 SSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDD 209
Query: 101 MAERDTRLWTTMLNGYIECGMIKE--ARKLFDGPDAEKSVSTW----STMVNGYVKINQI 154
+ + R T+ G++ CG + + + + G + + S++++ Y K
Sbjct: 210 SQKPNAR---TLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVP 266
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
EA + F E+ + +SW M+ Y + G + + F M E +
Sbjct: 267 REAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQ 311
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 115/223 (51%), Gaps = 28/223 (12%)
Query: 50 FISRLCKEGRTDHARKVFDQ----MPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I+ LCK G T A ++ ++ + + D+ +++T+I+ K ++ + L+ +M
Sbjct: 179 LINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNK 238
Query: 105 ---DTRLWTTMLNGYIECGMIKEA----------RKLFDGPDAEKSVSTWSTMVNGYVKI 151
+ + T++ G+ G +KEA + E + T+S++++GY +
Sbjct: 239 IHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLV 298
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSW 205
++ +A+ LF + R S+NIM+ G +N +++A++LF+ M + N V++
Sbjct: 299 KEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTY 358
Query: 206 NTIIKALVRCGRIEDAQWHF-NQMQERER--DVSSWTTIVDCL 245
N++I L + GR+ D W F ++M +R + D+ ++ ++ D L
Sbjct: 359 NSLIDGLCKLGRVSDV-WDFIDEMHDRGQPTDIITYNSLFDGL 400
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDM----RLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ LCK D A +F +M +DM ++++I+G K G + + D+M +
Sbjct: 324 NIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHD 383
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
R D + ++ +G + + A L + S+ +++ + G K ++E+
Sbjct: 384 RGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLED 443
Query: 157 AERLFYEMPERK---DVS-WNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTI 208
A+ ++ ++ + D + +M+ G + G ++AL L +M + P+ V++ I
Sbjct: 444 AQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDG--VTYEII 501
Query: 209 IKALVRCGRIEDAQWHFNQMQER 231
I+AL R + A +M R
Sbjct: 502 IRALFESDRNDKAVKFIREMIAR 524
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 115/223 (51%), Gaps = 28/223 (12%)
Query: 50 FISRLCKEGRTDHARKVFDQ----MPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER- 104
I+ LCK G T A ++ ++ + + D+ +++T+I+ K ++ + L+ +M
Sbjct: 179 LINGLCKSGETKAALQLLEKIKGFLVKPDVVMYNTIIDFLCKDKLVSDGYDLYSEMIVNK 238
Query: 105 ---DTRLWTTMLNGYIECGMIKEA----------RKLFDGPDAEKSVSTWSTMVNGYVKI 151
+ + T++ G+ G +KEA + E + T+S++++GY +
Sbjct: 239 IHPNVITYNTLIYGFSILGQMKEAVGEVKKARYVLAVMIKQRVEPDIVTYSSLMDGYFLV 298
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSW 205
++ +A+ LF + R S+NIM+ G +N +++A++LF+ M + N V++
Sbjct: 299 KEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTY 358
Query: 206 NTIIKALVRCGRIEDAQWHF-NQMQERER--DVSSWTTIVDCL 245
N++I L + GR+ D W F ++M +R + D+ ++ ++ D L
Sbjct: 359 NSLIDGLCKLGRVSDV-WDFIDEMHDRGQPTDIITYNSLFDGL 400
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDM----RLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ LCK D A +F +M +DM ++++I+G K G + + D+M +
Sbjct: 324 NIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHD 383
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
R D + ++ +G + + A L + S+ +++ + G K ++E+
Sbjct: 384 RGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLED 443
Query: 157 AERLFYEMPERK---DVS-WNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTI 208
A+ ++ ++ + D + +M+ G + G ++AL L +M + P+ V++ I
Sbjct: 444 AQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPDG--VTYEII 501
Query: 209 IKALVRCGRIEDAQWHFNQMQER 231
I+AL R + A +M R
Sbjct: 502 IRALFESDRNDKAVKFIREMIAR 524
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 110/221 (49%), Gaps = 17/221 (7%)
Query: 10 FILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQ 69
+++ LN PL + LA + + ++ +S I G A+ +FD+
Sbjct: 182 YVIKACGGLNNVPLCK----MVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDE 237
Query: 70 MPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLN-----GYIECG 120
+P RD LW+ M+NGY+K G A F +M + ++ + +L+ G + G
Sbjct: 238 LPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG 297
Query: 121 MIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYG 180
+ + G +++ +V+ +T++ Y K + +A ++F MP+ V+WN ++ GY
Sbjct: 298 IQLHGLVIRSGFESDPTVA--NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYV 355
Query: 181 QNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIE 219
QNG ++A+ LF+ M + + +++ + + ++++ G ++
Sbjct: 356 QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K GR D A + F +MP +D W+ MI + + G + A LF QM T+ + L+
Sbjct: 527 KSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSA 586
Query: 116 YIECGMIKEARKLFDGPDAEKSVS---------TWSTMVNGYVKINQIEEAERLFYEMPE 166
+ A L+ G + V ST+++ Y K ++ A +F M
Sbjct: 587 TLSACANYPA--LYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDW 644
Query: 167 RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWH 224
+ +VSWN ++ YG +G+ + LDLF M E + + V++ I+ A G +++ ++
Sbjct: 645 KNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYY 704
Query: 225 FNQMQE 230
F M E
Sbjct: 705 FRCMTE 710
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+ K G ARK+FD MP+ D W+ +I GY++ G EA LF M +
Sbjct: 317 NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVK 376
Query: 108 L----WTTMLNGYIECGMI---KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
L + + L ++ G + KE V S +V+ Y K +E A +
Sbjct: 377 LDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKT 436
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFR 193
F + M+ GY NG +AL+LFR
Sbjct: 437 FQQNTLVDVAVCTAMISGYVLNGLNVEALNLFR 469
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 42/189 (22%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
SF+ + K G + ++V + D+ L +++ Y K G ++ A K F Q
Sbjct: 384 SFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLV 443
Query: 105 DTRLWTTMLNGYIECGMIKEARKLF-----DG--PDA----------------------- 134
D + T M++GY+ G+ EA LF +G P+
Sbjct: 444 DVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELH 503
Query: 135 --------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
E S++ Y K +++ A + F MP + V WN+M+ + QNG+ E
Sbjct: 504 CDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPE 563
Query: 187 KALDLFRRM 195
A+DLFR+M
Sbjct: 564 LAIDLFRQM 572
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 108/217 (49%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ + C AR++F++M +R D+ ++ +I+GY K M+ EA LF ++
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 104 RD----TRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
++ + ++++G G I +KL D G V T++ +++ K +I E
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A + M ++ V++N MM GY + A D+F RM + E +++++N +I
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
+ +++A F +M+ + D++S+ +++D L
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGL 520
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I LC GR H +K+ D+M D+ ++ +I+ K G I EA + M +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + + M++GY + A+ +F+ E + ++ ++NGY K ++E
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A LF EM + + S+N ++ G G+I +L M + + +V+++N ++
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
A + + A F Q+ E
Sbjct: 554 AFCKTQPFDKAISLFRQIVE 573
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 119/253 (47%), Gaps = 24/253 (9%)
Query: 11 ILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT----DHARKV 66
IL++ + +H + L T L S + N + N+ I+ C G D + +
Sbjct: 95 ILINCYFHQSHTAF-AFSLLATILKSGYQPN--LVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 67 FDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMI 122
Q D + T+ING K G IK A L +M + + +++ +++G + G +
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211
Query: 123 KEARKLFDGPDAEKSV----STWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNI 174
+A L E+ + T++++++G + + +E +L +M + D ++NI
Sbjct: 212 SDALGLC-SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 175 MMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER- 231
++ + G+I +A + M + + ++V++N +++ + +A+ FN+M +R
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 232 -ERDVSSWTTIVD 243
E DV ++ ++D
Sbjct: 331 LEPDVLNYNVLID 343
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 125/251 (49%), Gaps = 29/251 (11%)
Query: 23 LIHGYPFLRTRLASTFSLNTEM-------KRC--NSFISRLCKEGRTDHARKVFDQMPER 73
LI+G+ + +L F L EM C N+ + LCKEG+ A+ + M +
Sbjct: 191 LIYGFCIV-GQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKE 249
Query: 74 ----DMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEA 125
D+ ++ +++GY +A+ +F+ MA+ D ++ M++G + M+ EA
Sbjct: 250 GVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEA 309
Query: 126 RKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERKD----VSWNIMMGG 178
LF+G E V +S++++G K +I A + EM +R +++ ++
Sbjct: 310 MDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDA 369
Query: 179 YGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQ--MQERERD 234
++ Q++KA+ L +++ + + N+ ++N ++ L + GR+ DAQ F M+ D
Sbjct: 370 LCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVD 429
Query: 235 VSSWTTIVDCL 245
V +++ +++ L
Sbjct: 430 VVTYSIMINGL 440
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 123/251 (49%), Gaps = 54/251 (21%)
Query: 49 SFISRLCKEGRTDHA----RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I+ LCK G+T A RK+ ++ D+ +++T+I+G K ++++A L+ +M E+
Sbjct: 120 TLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK 179
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEA 157
+ +T+++ G+ G + +A L + + +V T++T+V+G K ++ EA
Sbjct: 180 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREA 239
Query: 158 ERLFY-------------------------EMPERKDV--------------SWNIMMGG 178
+ L E + K+V S+++M+ G
Sbjct: 240 KSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISG 299
Query: 179 YGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--D 234
+ +++A+DLF M +VV+++++I L + GRI A + ++M +R + +
Sbjct: 300 LSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPN 359
Query: 235 VSSWTTIVDCL 245
V ++T+++D L
Sbjct: 360 VITYTSLIDAL 370
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N I+ C + + A VF ++ + D+ + T+I G G +KE+ D++
Sbjct: 49 NILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVS 108
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ +L + T++NG + G A +L +G V ++T+++G K + +
Sbjct: 109 QGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRD 168
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
A L+ EM E++ V++ ++ G+ GQ++KA L M NV ++NT++
Sbjct: 169 AFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVD 228
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVD 243
L + G++ +A+ M + DV ++ ++D
Sbjct: 229 GLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMD 263
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA----RKLFD 99
+S I LCK GR + A K D+M +R ++ + ++I+ K + +A +K+ D
Sbjct: 329 SSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKD 388
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMVNGYVKINQI 154
Q + + + +++G + G + +A+K+F G + + V T+S M+NG K +
Sbjct: 389 QGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVD--VVTYSIMINGLCKESLF 446
Query: 155 EEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+EA L +M ++ +++ ++ + + +KA L R M
Sbjct: 447 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 491
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 51 ISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER-- 104
IS L K D A +F+ M D+ + ++I+G K G I A K D+M +R
Sbjct: 297 ISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQ 356
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+ +T++++ + + +A L + ++ T++ +V+G K ++ +A++
Sbjct: 357 PPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQK 416
Query: 160 LFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKAL 212
+F ++ + V+++IM+ G + ++AL L +M + + +++ TII A
Sbjct: 417 VFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF 475
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL--WTTMLNGYIECG 120
ARK+FD+ L + MI Y+K G + ARKLFD M ERD + WT M++GY +
Sbjct: 165 ARKLFDEFGGNGCVL-NAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAH 223
Query: 121 MIKEARKLFD-------GPD-------------------------------AEKSVSTWS 142
EA KLF PD K V ++
Sbjct: 224 NPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYN 283
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER-- 200
++++ Y K I +A LF M + ++W M+ G +G ++AL +F M + +R
Sbjct: 284 SLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVK 343
Query: 201 -NVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
N V++ I+ A G +E + +F M+ R E + + ++D L
Sbjct: 344 PNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLL 392
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK 136
L++++I+ Y K G I++A +LF+ M + WTTM+ G G+ KEA ++F + E
Sbjct: 281 LYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKED 340
Query: 137 SVS----TWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEK 187
V T+ +++ + +E F M R + + M+ G+ G +++
Sbjct: 341 RVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQE 400
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
A ++ RMP E N W +++ A RCG E A+
Sbjct: 401 AKEMVLRMPF-EANAAIWGSLLAASTRCGDAELAE 434
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER-DMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
N+ ++ K + + +F +M ER D W++MI+GY+ G++ +A L M +R
Sbjct: 581 NALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQ 640
Query: 107 RL----WTTMLNGYIECGMIK---EARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+L + T+L+ ++ E E V S +V+ Y K +I+ A R
Sbjct: 641 KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASR 700
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGR 217
F MP R SWN M+ GY ++G +KAL +F RM + + + V++ ++ A G
Sbjct: 701 FFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGL 760
Query: 218 IEDAQWHFNQMQE 230
+++ HF M E
Sbjct: 761 VDEGYKHFKSMGE 773
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM---AER 104
++ ++ + G D A+ +F QM +R+ + ++ G + +EA K+F +M E
Sbjct: 273 SALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEI 332
Query: 105 DTRLWTTMLNGYIECGMIKEARK--------LFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
++ +L+ + E +KE ++ LF + +S + +VN Y K I+
Sbjct: 333 NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDN 392
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSWNTIIKALVR 214
A +F MP + VSWN M+ G N + E+A+ F M +RN V S ++I L
Sbjct: 393 ACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTM---KRNGMVPSNFSVISTLSS 449
Query: 215 CGRI 218
C +
Sbjct: 450 CSSL 453
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 56/266 (21%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+H Y F + + S+ N+ ++ K D+A VF MP +D W++MI+
Sbjct: 360 VHAYLFRSGLVDARISIG------NALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMIS 413
Query: 84 GYIKCGMIKEARKLF-----DQMAERDTRLWTTMLN----GYIECGMIKEARKLFDGPDA 134
G +EA F + M + + +T+ + G++ G G D
Sbjct: 414 GLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDL 473
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ-NGQIEKALDLFR 193
+ SVS + ++ Y + + I E +++F++MPE VSWN +G + + +AL F
Sbjct: 474 DVSVS--NALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFL 531
Query: 194 RMPE----PER-----------------------------NVVSWNTIIKALV----RCG 216
M + P R +V N I AL+ +C
Sbjct: 532 EMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCE 591
Query: 217 RIEDAQWHFNQMQERERDVSSWTTIV 242
++ED + F++M ER RD SW +++
Sbjct: 592 QMEDCEIIFSRMSER-RDEVSWNSMI 616
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 55/265 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG F + L+ ++ N+ ++ + + +KVF QMPE D W++ I
Sbjct: 462 IHGEGF-------KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 514
Query: 84 GYIKC-GMIKEARKLFDQMAE---RDTRL----WTTMLNGYIECGMIKEARKLFDGPDAE 135
K + +A K F +M + R R+ ++ + G+ + L
Sbjct: 515 ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 574
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRR 194
+ + ++ Y K Q+E+ E +F M ER+D VSWN M+ GY +G + KA+DL
Sbjct: 575 DDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWP 634
Query: 195 MPE-------------------------------------PERNVVSWNTIIKALVRCGR 217
M + E +VV + ++ +CG+
Sbjct: 635 MMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGK 694
Query: 218 IEDAQWHFNQMQERERDVSSWTTIV 242
I+ A F M R++ SW +++
Sbjct: 695 IDYASRFFELMP--VRNIYSWNSMI 717
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 19 NTHPLIHGYPFLRTRLAST------FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+T+ + Y F ++L + ++ + N +L K G TD
Sbjct: 8 STYTFLRHYTFSHSQLQQLDSEFDRYKTSSSLYDANHLHLQLYKTGFTD----------- 56
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGP 132
D+ +T+IN Y++ G + ARKLFD+M +++ W+ +++GY + M EA LF G
Sbjct: 57 -DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGV 115
Query: 133 DAEKSVSTWSTMVN--------GYVKINQIEEAERLFYEMPERKD-VSWNIMMGGYGQ-N 182
+ + + + G I + ++P D + N++M Y +
Sbjct: 116 ISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCS 175
Query: 183 GQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
G I+ A +F + RN V+WN+II R G A F+ MQ
Sbjct: 176 GSIDDAHRVFDEI--KFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQ 220
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 57 EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY 116
G D A +VFD++ R+ W+++I+ Y + G A KLF M L N Y
Sbjct: 175 SGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVEL-NLRPNEY 233
Query: 117 IECGMIKEARKLFDG---------PDAEKS-----VSTWSTMVNGYVKINQIEEAERLFY 162
C ++ A L D EKS + S +VNG+ + ++ A+ +F
Sbjct: 234 TLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFK 293
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+M +R V+ N +M G + Q E+A +F+ M +
Sbjct: 294 QMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKD 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 73 RDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGP 132
RD+ + ++NG+ + G++ A+ +F QM +R+ ++ G +EA K+F
Sbjct: 267 RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 326
Query: 133 D--AEKSVSTWSTMVNGYVKINQIEEAER--------LFYEMPERKDVS-WNIMMGGYGQ 181
E + + +++ + + + ++E +R LF +S N ++ YG+
Sbjct: 327 KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGK 386
Query: 182 NGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
I+ A +F+ MP ++ VSWN++I L R E+A F+ M+ S+++ I
Sbjct: 387 CTAIDNACSVFQLMPS--KDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVI 444
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 34/180 (18%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L +++ ++ + K G+ D+A + F+ MP R++ W++MI+GY + G ++A K+F
Sbjct: 675 LESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFT 734
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
+M + PD T+ +++ + ++E +
Sbjct: 735 RMKQHG------------------------QSPDH----VTFVGVLSACSHVGLVDEGYK 766
Query: 160 LFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR 214
F M E +S ++ M+ G+ G ++K D + MP + N++ W T++ A R
Sbjct: 767 HFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMP-MDPNILIWRTVLGACCR 825
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 112/213 (52%), Gaps = 22/213 (10%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
++ IS C G+ A F++M +++G+ K G +KEA+ + M ++
Sbjct: 247 SALISGFCIVGKLKDAFDFFNKM-------IFILVDGFCKEGRVKEAKNVLAMMMKQGIK 299
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEEAERL 160
D ++++++GY + +A +F+ + ++S M+NG+ KI ++EA +L
Sbjct: 300 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKL 359
Query: 161 FYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVR 214
F EM ++ ++++ ++ G ++G+I AL L +M + N+V++N+I+ AL +
Sbjct: 360 FKEMHHKQIFPDVITYSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDALCK 419
Query: 215 CGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+++ A + +++ + V ++T ++D L
Sbjct: 420 THQVDKAIALLTKFKDQGIQPSVYTYTILIDGL 452
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 54/237 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I+ LC G+ + A ++D+M ++ ++ +ING+ K M+KEA K+FD +++
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKL------------------------------- 128
+ + + TM++ Y + GM++E L
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQA 431
Query: 129 -------FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNIMMG 177
+ + V T++ +++G K ++ AE+L EM + V++N +M
Sbjct: 432 AKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMD 491
Query: 178 GYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
GY G+++ AL++ RM E ER NVV++N +IK + ++E A N+M E+
Sbjct: 492 GYCMEGKLKAALNVRTRM-EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 547
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 122/259 (47%), Gaps = 33/259 (12%)
Query: 10 FILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQ 69
+L + L H + TR A + + CN +S L KE + V+ +
Sbjct: 136 LVLAYVKNLELHCAYEAF----TR-AKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKE 190
Query: 70 MPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGM 121
M +R ++ ++ ING + G + +A + M + + T+++GY + G
Sbjct: 191 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG- 249
Query: 122 IKEARKLFDGPDAEKSV---------STWSTMVNGYVKINQIEEAERLFYEMPER----K 168
A K++ K + T++T+++G+ K + A++ F EM ++
Sbjct: 250 --SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
V++N ++ G NG++E+A+DL+ +M + N+V++N +I + +++A F+
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD 367
Query: 227 QMQERER--DVSSWTTIVD 243
+ ++E +V ++ T++D
Sbjct: 368 DVSKQELVPNVITFNTMID 386
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 54/237 (22%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I+ LC G+ + A ++D+M ++ ++ +ING+ K M+KEA K+FD +++
Sbjct: 178 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 237
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKL------------------------------- 128
+ + + TM++ Y + GM++E L
Sbjct: 238 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQA 297
Query: 129 -------FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM----PERKDVSWNIMMG 177
+ + V T++ +++G K ++ AE+L EM + V++N +M
Sbjct: 298 AKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMD 357
Query: 178 GYGQNGQIEKALDLFRRMPEPER---NVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
GY G+++ AL++ RM E ER NVV++N +IK + ++E A N+M E+
Sbjct: 358 GYCMEGKLKAALNVRTRM-EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 413
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 122/259 (47%), Gaps = 33/259 (12%)
Query: 10 FILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQ 69
+L + L H + TR A + + CN +S L KE + V+ +
Sbjct: 2 LVLAYVKNLELHCAYEAF----TR-AKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKE 56
Query: 70 MPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGM 121
M +R ++ ++ ING + G + +A + M + + T+++GY + G
Sbjct: 57 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG- 115
Query: 122 IKEARKLFDGPDAEKSV---------STWSTMVNGYVKINQIEEAERLFYEMPER----K 168
A K++ K + T++T+++G+ K + A++ F EM ++
Sbjct: 116 --SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 173
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
V++N ++ G NG++E+A+DL+ +M + N+V++N +I + +++A F+
Sbjct: 174 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD 233
Query: 227 QMQERER--DVSSWTTIVD 243
+ ++E +V ++ T++D
Sbjct: 234 DVSKQELVPNVITFNTMID 252
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 104/200 (52%), Gaps = 19/200 (9%)
Query: 49 SFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ + LCK R A ++ D M E + ++D +I+G+ K G +++A+++F +M+ER
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680
Query: 105 DTRLWTTMLNGYIECG--------MIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ +I+C ++K K+ + +V ++ MV+G KI + +E
Sbjct: 681 GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLEN-SCTPNVVIYTEMVDGLCKIGKTDE 739
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A +L +M E+ V++ M+ G+G++G+IE+ L+LFR M N +++ +I
Sbjct: 740 AYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLIN 799
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
G +++A ++M++
Sbjct: 800 HCCSNGLLDEAYKLLDEMKQ 819
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++F LC G+ D A K+ +M + D + +I +++A LF++M
Sbjct: 429 SNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKR 488
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+T +++ + + G+I++ARK FD +V T++ +++ Y+K Q+
Sbjct: 489 NGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPV 548
Query: 157 AERLF----YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEPER------ 200
A+ LF E + V++ ++ G+ + GQIEKA ++ RM + ++
Sbjct: 549 ADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDH 608
Query: 201 ------NVVSWNTIIKALVRCGRIEDAQWHFNQM 228
NV+++ ++ L + R+++A + M
Sbjct: 609 NNCEGPNVITYGALVDGLCKANRVKEAHELLDTM 642
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 31/205 (15%)
Query: 51 ISRLCKEGRTDHARKVFD----QMPERDMRLWDTMINGYIKCGMI------KEARKLFDQ 100
I LC G+ + A + F+ + E + ++ ++NGY + +I KEA L
Sbjct: 512 IEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRT 571
Query: 101 MAERDTR----LWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYV 149
M E + + +++ + G ++ A LF+ PDA T++ M+NGY
Sbjct: 572 MLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDA----VTYTIMINGYC 627
Query: 150 KINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVV 203
K N + EA LF +M ER V++ IM+ GY + + +A +LF+ M E + +V+
Sbjct: 628 KTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVI 687
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQM 228
++ IIK L+ G E A +N+M
Sbjct: 688 AYTVIIKGLLNSGHTEIAFQLYNEM 712
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 31/259 (11%)
Query: 14 HAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKR----------CNSFISRLCKEGRTDHA 63
H HK +I G+ T+L S+ EM++ C + + C D A
Sbjct: 292 HVHKYAYTAVIRGFC-NETKLDEAESVFLEMEKQGLVPDVYVYC-ALVHGYCNSRNFDKA 349
Query: 64 RKVFDQMPERDMRLWDTMINGYIKC----GMIKEARKLFDQMAER----DTRLWTTMLNG 115
V+ M R ++ + + + C G E +F++ E D + + + +
Sbjct: 350 LAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDA 409
Query: 116 YIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----K 168
+ G + +A + D + + ++T++NGY + EA+ LF EM ER
Sbjct: 410 LCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPD 469
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFN 226
V++N++ G+ +N +A+DL M E N + II+ L G++E+A+ FN
Sbjct: 470 VVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFN 529
Query: 227 QMQERERDVSS--WTTIVD 243
++ ++S +T +V+
Sbjct: 530 WLKGESVEISVEIYTALVN 548
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 27/207 (13%)
Query: 45 KRCNSFISRLCKEGRTDHARKVFDQMP----ERDMRLWDTMINGYIKCGMIKEARKLFDQ 100
K N LCK G+ D A + D++ + DM+ + T+INGY G EA+ LF +
Sbjct: 401 KAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKE 460
Query: 101 MAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQ 153
M ER D + + G+ EA L + E + +T ++ G +
Sbjct: 461 MEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGK 520
Query: 154 IEEAERLF-YEMPERKDVS---WNIMMGGYGQNGQIEK------ALDLFRRMPE----PE 199
+EEAE F + E ++S + ++ GY + IEK A L R M E P
Sbjct: 521 VEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPS 580
Query: 200 RNVVSWNTIIKALVRCGRIEDAQWHFN 226
+ V ++ I AL G +E A FN
Sbjct: 581 K--VMYSKIFTALCCNGNMEGAHTLFN 605
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 20 THPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DM 75
+H L + LRT L + M + + LC G + A +F+ D
Sbjct: 559 SHELKEAFILLRTMLEMNMKPSKVMY--SKIFTALCCNGNMEGAHTLFNLFIHTGFTPDA 616
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDG 131
+ MINGY K + EA +LF M ER D +T M+NGY + ++EA +LF
Sbjct: 617 VTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKD 676
Query: 132 -------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
PD V ++ ++ G + E A +L+ EM
Sbjct: 677 MKERGIKPD----VIAYTVIIKGLLNSGHTEIAFQLYNEM 712
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 22/253 (8%)
Query: 6 PPLSFILMHAHKLNTHPL----IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTD 61
P +S ++ A + PL I+ + ++ +++ N +K C+ + + G D
Sbjct: 73 PFISNTMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCD 132
Query: 62 --------------HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
H R V + D + ++++ Y +CG++ AR LFDQ+ +
Sbjct: 133 DDNLVVVYNKGTEIHCR-VIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTSLV 191
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
W M++ Y + A L + K+V +W+T++ Y+++ ++ A R+F MPER
Sbjct: 192 SWNIMISAYDLVNDYESADYLLELMPC-KTVVSWNTLIARYIRLGDVQAARRVFGCMPER 250
Query: 168 KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHF 225
VSWN M+ G AL+LF M + V+ +I+ A G +E +
Sbjct: 251 NAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIY 310
Query: 226 NQMQERERDVSSW 238
++ E + S+
Sbjct: 311 ESLKVCEHKIESY 323
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+R + G AR+VF MPER+ W++MI G + A +LF +M +
Sbjct: 225 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 284
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGPDA-EKSVSTW--STMVNGYVKINQIEEAERL 160
++L E G ++ K+++ E + ++ + +VN Y K + A +
Sbjct: 285 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEI 344
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE-------PERNVVSWNTIIKALV 213
F M + WN M+ G +G E+ LF M E P+R T I LV
Sbjct: 345 FNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDR-----VTFIGVLV 399
Query: 214 RC---GRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
C G ++ A+W+F+ M +R + D + +VD L
Sbjct: 400 ACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLL 437
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS +S K G +A VFD MP RD W+TMI+G+++ G + K F QM E
Sbjct: 81 NSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRV 140
Query: 105 ----DTRLWTTMLNGY--IECGMIKEARKLFDG----PDAEKSVSTWSTMVNGYVKINQI 154
D TTML+G + G+ ++ G E+ ++ + ++ Y K
Sbjct: 141 CCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECF 200
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM---PEPERNVVSWNTIIKA 211
+ ++F EM ER V+W ++ G QN E +L LF +M NV+++ + + A
Sbjct: 201 SQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMA 260
Query: 212 LVRCGRIEDAQ 222
+ D Q
Sbjct: 261 CSGLQVLRDGQ 271
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 113 LNGYIECGMIKEARKL-FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
L I +IK+ FDG ++ W+++++ Y K + A +F MP R VS
Sbjct: 52 LGSSIHARIIKQPPSFDFDGSQ-RNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVS 110
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPER 200
WN M+ G+ +NG + + F++M E R
Sbjct: 111 WNTMISGFLRNGDFDTSFKFFKQMTESNR 139
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 38/181 (20%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGY- 116
G + AR +FD M RD+ W++MI+GY+K G + A KLFD M ER+ W +++GY
Sbjct: 186 GYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYS 245
Query: 117 --------------------------IECGMIKEAR--KLFDGPDAEKSVSTW------- 141
+ C + R +L +G S+
Sbjct: 246 KGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLFMRSSLI 305
Query: 142 --STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
+ +++ Y K ++E A ++F M R VSWN M+ G+ +G E L LF M E
Sbjct: 306 LDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMVGME 365
Query: 200 R 200
R
Sbjct: 366 R 366
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 42/194 (21%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
+++ + Y CG ++ AR +FD M RD W +M++GY++ G + A KLFD E+++
Sbjct: 176 NSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFD-VMPERNL 234
Query: 139 STWSTMVNGYVKINQIEEAERLFYEM-------------------------PERKDVSWN 173
TW+ +++GY K A +LF EM E K V +
Sbjct: 235 VTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGS 294
Query: 174 I--------------MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
+ ++ Y + G++E A +F RM RN+VSWN +I G E
Sbjct: 295 MIRLFMRSSLILDTALIDMYCKCGRVEAASKVFERM--SSRNLVSWNAMILGHCIHGNPE 352
Query: 220 DAQWHFNQMQERER 233
D F+ M ER
Sbjct: 353 DGLSLFDLMVGMER 366
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 19/196 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM-PERDM-RLWDTMINGYIKCGMIKEARKLFDQMAERD 105
N + K GR A V + P + + W ++++ Y G +K AR+LFDQM ERD
Sbjct: 260 NKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERD 319
Query: 106 TRLWTTMLNGYIECGMIKEARKLF---DG----PDAEKSVSTWSTMVNGYVKINQIEEAE 158
WT M++GY G +EA +LF +G PD V+ S ++ +E
Sbjct: 320 VVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSAC----ARLGALELGR 375
Query: 159 RLFYEMP-ERKDVSWN-----IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKAL 212
R+ + E S N ++ Y + G I+ ALD+FR+ + ++ +N+II L
Sbjct: 376 RIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGL 435
Query: 213 VRCGRIEDAQWHFNQM 228
GR E A+ F +M
Sbjct: 436 AHHGRGEYAKNLFEEM 451
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 53/242 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AE 103
N+ ++ C G +A KVFD+ RD ++TMING+ + G + ++F +M
Sbjct: 157 NALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVR 216
Query: 104 RDTRLWTTMLNG-------------------------------------YIECGMIKEAR 126
D + +L+G Y +CG + A
Sbjct: 217 PDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAE 276
Query: 127 KLFDGPDAEKS-VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQI 185
+ KS V+ W+++V+ Y +++ A RLF +M ER VSW M+ GY G
Sbjct: 277 TVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCF 336
Query: 186 EKALDLFRRMP----EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTI 241
++AL+LF ++ +P+ V + AL C R+ + R+ +WT
Sbjct: 337 QEALELFVKLEGLGMKPDEVAV-----VAALSACARL--GALELGRRIHRQYAGENWTCS 389
Query: 242 VD 243
++
Sbjct: 390 IN 391
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
NS + + G+ D ARKVFD M E+ + W T++ GY+K G EA KLF++M ++
Sbjct: 155 NSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIG 214
Query: 108 L----WTTMLNGYI---ECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
L + +++G I E + L + S + ++ Y + + A R+
Sbjct: 215 LDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSA-RI 273
Query: 161 FYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRR--MPEPERNVVSWNTIIKALVRCGR 217
+++ RK V SW M+ GY + + ++ALDLFRR M E + N + T++ A G
Sbjct: 274 IFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGS 333
Query: 218 I----EDAQWHFNQMQERERDVSS 237
+ E Q+ F E + V +
Sbjct: 334 LCIGEEIEQYAFENGFETDLQVQT 357
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 21 HPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDT 80
H +HG +TF+ K C + +S G H VF + D + +
Sbjct: 3 HSSVHG---------NTFTYPLLFKSCANLLS--IPHGTMLHGH-VFRLGFQADTFVQTS 50
Query: 81 MINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKS 137
+++ Y KC +I+ ARK+FD+M ER W ++++ Y M+++A L + S
Sbjct: 51 LVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPS 110
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERK----------DVSW-NIMMGGYGQNGQIE 186
ST+ ++++GY + + E L+ M +VS N +MG Y Q GQ++
Sbjct: 111 SSTFVSILSGYS--SNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMD 168
Query: 187 KALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+A +F M E+ +VSW TI+ V+ G +A FN+MQ +
Sbjct: 169 EARKVFDFM--DEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQ 211
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L T + C S E +A F+ E D+++ ++++ Y KCG I +AR++F
Sbjct: 320 TLATVLSACADLGSLCIGEEIEQYA---FENGFETDLQVQTSLVHMYSKCGNINKAREVF 376
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFD--------GPDAEKSVSTWSTMVNGYVK 150
+++ +D LW++M+N Y GM EA LF+ PDA +++++
Sbjct: 377 ERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDA----IVYTSLLFACSH 432
Query: 151 INQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMP 196
IE+ + F M ++ + ++ + GQ++ ALD MP
Sbjct: 433 SGLIEDGLKYFKSMQTDFGITPTKEHYTCLVDLLARVGQLDLALDTIEAMP 483
>Medtr7g111120.1 | PPR containing plant-like protein | HC |
chr7:45588277-45586755 | 20130731
Length = 417
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 50/240 (20%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
S F ++T + F+S L A +FD+MP+RD W+TMI GY + +K+
Sbjct: 65 FTSHFHISTCLLNSYVFLSFL-------DACILFDEMPQRDTVTWNTMILGYSRLEDVKK 117
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF------DG--PDA----------- 134
AR+LFD+M RD W M++ Y+ G ++ LF +G PD
Sbjct: 118 ARQLFDEMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCA 177
Query: 135 ----------------------EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSW 172
E +V + +VN Y K + A + M ER SW
Sbjct: 178 HVERHGLLGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSW 237
Query: 173 NIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
+M+ G + G ++AL +F +M + N +++ ++ A G +ED + +F ++E
Sbjct: 238 TLMICGAVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIEE 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 16 HKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDM 75
H L +HGY + + + LN E+ + ++ K G +A V + M ERD+
Sbjct: 182 HGLLGGKSVHGYI-----VKNGWELNVEIGA--ALVNMYAKGGVLRNAAMVLELMDERDV 234
Query: 76 RLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLF-- 129
W MI G ++CG KEA +F++M + + +T +L+ G +++ R+ F
Sbjct: 235 TSWTLMICGAVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKM 294
Query: 130 -DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGY----GQNGQ 184
+ + V ++ +V K +EEA + M DV +++G + ++ Q
Sbjct: 295 IEECGLKPRVQHYACLVYLIGKSGMLEEAYEIIKMMKVEPDV---VVLGSFLSACKEHKQ 351
Query: 185 IEKA---LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQ 222
E A ++ RM +PE ++ I V + E+A+
Sbjct: 352 FEIAEGVIEQVLRMAKPENYRGLYSLIADLYVIGDKSEEAE 392
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E ++ + ++N Y K G+++ A + + M ERD WT M+ G + CG KEA +F+
Sbjct: 200 ELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICGAVRCGFNKEALVVFEK 259
Query: 132 ---PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNG 183
+ + T++ +++ +E+ R +++M E + + ++ G++G
Sbjct: 260 MQMDGVKPNELTFTGVLSACAHGGFVEDGRR-YFKMIEECGLKPRVQHYACLVYLIGKSG 318
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+E+A ++ + M + E +VV + + A + E A+ Q+
Sbjct: 319 MLEEAYEIIKMM-KVEPDVVVLGSFLSACKEHKQFEIAEGVIEQV 362
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFD 99
L+ E+ NS +S K R D A +F+ + ++ W+ MI GY + G + EA LF
Sbjct: 351 LDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFC 410
Query: 100 QMAERDTRLWTTMLNGYIEC-------GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKIN 152
M ++ + L I M K L + V + +++ Y K
Sbjct: 411 VMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAKCG 470
Query: 153 QIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
+ A +LF M ER ++WN M+ GYG +G ++A+D+F M + N ++ ++I
Sbjct: 471 ATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVIS 530
Query: 211 ALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
A G +E+ F M+E E + ++ +VD L
Sbjct: 531 ACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLL 568
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 53/264 (20%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHGY LR S S+ N+ + + G AR VF+ M + W+TMI+
Sbjct: 241 IHGYA-LRLGFESKVSV------INALLYMYFECGCERIARLVFEGMINKCAVSWNTMID 293
Query: 84 GYIKCGMIKEA----RKLFDQMAERDTRLWTTMLNGYIECGMIKEAR---KLFDGPDAEK 136
GY + G +EA K+ D+ E L + G ++ R KL +
Sbjct: 294 GYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKKLDF 353
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP 196
V +++++ Y K +++ A +F + ++ +V+WN M+ GY QNG + +AL LF M
Sbjct: 354 EVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQ 413
Query: 197 EPE-------------------------------------RNVVSWNTIIKALVRCGRIE 219
E +V +I +CG +
Sbjct: 414 SQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAKCGATQ 473
Query: 220 DAQWHFNQMQERERDVSSWTTIVD 243
A+ F+ M ER V +W ++D
Sbjct: 474 TARKLFDMMHERH--VITWNAMID 495
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
+ D+ + +I+ Y KCG + ARKLFD M ER W M++GY G+ KEA +FD
Sbjct: 453 DNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDN 512
Query: 132 PDAEKSV---STWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNG 183
E + +T+ ++++ +EE F M E + ++ ++ G+ G
Sbjct: 513 MQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLLGRAG 572
Query: 184 QIEKALDLFRRMP 196
++ A +L MP
Sbjct: 573 KLHGAWNLIEEMP 585
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 12/180 (6%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR-- 107
I+ K G + A VFD + + L+ M+ GY K + +A + +M R
Sbjct: 58 LINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPV 117
Query: 108 ----LWTTMLNGY---IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
+ L G +E G + + +G E + + ++ YVK +I++A ++
Sbjct: 118 VYDFAYLLQLCGKKFELEKGREIHGQVIVNG--FEYDLFSMIGVMGFYVKCGEIDDAFKV 175
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
F + E+ VSW ++ GY QNG ++ALDLF RM E S T++ L I+D
Sbjct: 176 FERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSV-TLVSILPAVADIKD 234
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG LA ++ ++ + I K G T ARK+FD M ER + W+ MI+
Sbjct: 443 IHG-------LAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMID 495
Query: 84 GYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF----DGPDAE 135
GY G+ KEA +FD M + + + ++++ G ++E F + E
Sbjct: 496 GYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLE 555
Query: 136 KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQI---EKALD- 190
S+ +S +V+ + ++ A L EMP + ++ M+G + + EKA D
Sbjct: 556 PSMDHYSAVVDLLGRAGKLHGAWNLIEEMPIKPGITVLGAMLGACKIHKNVELGEKAADK 615
Query: 191 LFRRMP-EPERNVVSWNTIIKA 211
LF P E +V+ N + A
Sbjct: 616 LFELDPDEGGYHVLLANMYVSA 637
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G D KVFD+M R++ W T+I G + CG + AR++F+++ ++ WT M+NGY+
Sbjct: 168 GDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYV 227
Query: 118 -----------------------------------ECGMIKEARKLFDGP---DAEKSVS 139
+ G +K R++ D E
Sbjct: 228 KNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPF 287
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
+ +V+ Y K ++ A ++F M R +WN M+ +G +G + LDLF+ M +
Sbjct: 288 LGTALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAG 347
Query: 200 R--NVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+ +++ ++ A V+ +E Q +F+ M E
Sbjct: 348 VVPDAITFVGVLSACVQINDLELGQKYFSLMTEH 381
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 39/202 (19%)
Query: 50 FISRLCK----EGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA--- 102
I +LC+ G+ D+A VFDQ+ + D+ W+ MI Y G+ +++ LF M
Sbjct: 54 LIRKLCQISSSYGKIDYASLVFDQLNDPDIFTWNVMIRAYNTSGLPQKSIFLFKDMICCG 113
Query: 103 -ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLF 161
D + ++N I G+I R L G + + WS + YV+ N + L+
Sbjct: 114 FLPDKFTYPFVINACIASGVIDFGR-LTHGLAIK--MGFWSDV---YVQNNMMN----LY 163
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
+++ D W K D R RNVVSW T+I LV CG+++ A
Sbjct: 164 FKIGGDVDDGW--------------KVFDKMRV-----RNVVSWTTVIAGLVACGKLDTA 204
Query: 222 QWHFNQMQERERDVSSWTTIVD 243
+ F ++ ++V SWT +++
Sbjct: 205 REVFERIP--SKNVVSWTAMIN 224
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 1 MAKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT 60
M+ LP S L + IHG+ + F + N + + LC
Sbjct: 346 MSSILPACS----QLKDLKSGKTIHGFAVKHGMVEDVFVCTALV---NLYANCLC----V 394
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGYIEC 119
A+ VFD MP R++ W+++ + Y+ CG ++ +F +M + TML+ C
Sbjct: 395 REAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHAC 454
Query: 120 GMIKEAR--KLFDGPDAE----KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWN 173
+++ + K+ G + V + +++ Y K + EA+ +F +P R+ SWN
Sbjct: 455 SDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWN 514
Query: 174 IMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
++ Y N + EK L +F +M E + + ++W+ +I V+ RIE+A F +MQ
Sbjct: 515 GILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ 572
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 46/241 (19%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+FI K + AR+VFD + RD+ W+++ Y+ CG ++ +F +M +
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 108 L----WTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERL 160
+++L G + +K +++ + V S VN Y K + EA+ +
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEP---------------- 198
F MP R V+WN + Y G +K L++FR M P+P
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDL 258
Query: 199 ---------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVD 243
NV N ++ C + +AQ F+ M R+V +W ++
Sbjct: 259 KSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP--HRNVITWNSLAS 316
Query: 244 C 244
C
Sbjct: 317 C 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 74/262 (28%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G+ H V M E D+ + +N Y KC ++EA+ +FD M RD W ++ +
Sbjct: 158 KSGKEIHGFVVRHGMVE-DVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSC 216
Query: 116 YIECGMIKEARKLF-----DG--PDA-------------------------------EKS 137
Y+ CG ++ +F DG PD ++
Sbjct: 217 YVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVEN 276
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM-- 195
V + +VN Y + EA+ +F MP R ++WN + Y G +K L++FR M
Sbjct: 277 VFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGL 336
Query: 196 ----PEPE------------RNVVSWNTIIKALVRCGRIED-------AQWHFNQMQERE 232
P+P +++ S TI V+ G +ED + N + RE
Sbjct: 337 NGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVRE 396
Query: 233 ----------RDVSSWTTIVDC 244
R+V +W ++ C
Sbjct: 397 AQTVFDLMPHRNVVTWNSLSSC 418
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQ-- 100
++ R N+ + K G +R VFD MP +D+ W+TMI G KEA LF++
Sbjct: 614 DLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKML 673
Query: 101 --MAERDTRLWTTMLNGYIECGMIKEARKLFDG--------PDAEKSVSTWSTMVNGYVK 150
M + D+ +T +L+ +++E ++F+ P+AE ++ +V+ Y +
Sbjct: 674 LSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH----YTCVVDIYSR 729
Query: 151 INQIEEAERLFYEMP-ERKDVSWNIMMGGYGQNGQIE----KALDLFRRMPEPERNVVS- 204
+EEA MP E ++W + G +E A LF P N V+
Sbjct: 730 AGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTL 789
Query: 205 WNTIIKA 211
+N ++ A
Sbjct: 790 FNILVTA 796
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 45/215 (20%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
K G+ H V M E D+ + + +++ Y KC ++EA+ +FD + R+ W +L
Sbjct: 461 KSGKVIHGFAVRHGMVE-DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTA 519
Query: 116 YIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEM------PE 166
Y ++ +F + ++ + TWS ++ G VK ++IEEA +F +M P+
Sbjct: 520 YFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPD 579
Query: 167 RKDV----------------------------SW-----NIMMGGYGQNGQIEKALDLFR 193
+ W N ++ Y + G + + ++F
Sbjct: 580 ETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFD 639
Query: 194 RMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
MP ++V SWNT+I A G ++A F +M
Sbjct: 640 MMPI--KDVFSWNTMIFANGMHGNGKEALSLFEKM 672
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWT 110
+S + G+ H VF + D+ + +++ Y KCG + +R +FD M +D W
Sbjct: 592 LSECLRMGKEIHCY-VFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWN 650
Query: 111 TMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
TM+ G KEA LF+ PD+ +T++ +++ +EE ++F
Sbjct: 651 TMIFANGMHGNGKEALSLFEKMLLSMVKPDS----ATFTCVLSACSHSMLVEEGVQIFNS 706
Query: 164 MP-----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
M E + + ++ Y + G +E+A +RMP E ++W +
Sbjct: 707 MSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPM-EPTAIAWKAFLAG 758
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I+R + G AR+VF MPER+ W++MI G + A +LF +M +
Sbjct: 227 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 286
Query: 108 ----LWTTMLNGYIECGMIKEARKLFDGPDA-EKSVSTW--STMVNGYVKINQIEEAERL 160
++L E G ++ K+++ E + ++ + +VN Y K + A +
Sbjct: 287 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEI 346
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWN--TIIKALVRC--- 215
F M + WN M+ G +G E+ LF M E + + T I LV C
Sbjct: 347 FNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHK 406
Query: 216 GRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
G ++ A+W+F+ M +R + D + +VD L
Sbjct: 407 GLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLL 439
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 7 PLSFILMHAHKLNTHPLIHGYP--FLRTRLASTFSLNTEMKRCNSFISRLC---KEGRTD 61
PL +L++ L + + Y F+ + + L E C+ L +G
Sbjct: 89 PLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDDDNLVVVYNKGTEI 148
Query: 62 HARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGM 121
H R V + D + ++++ Y +CG++ AR LFDQ+ + W M++ Y
Sbjct: 149 HCR-VIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDRVDD 207
Query: 122 IKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQ 181
+ A L + K+V +W+T++ Y+++ ++ A R+F MPER VSWN M+ G
Sbjct: 208 YELADHLLELMPC-KTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVS 266
Query: 182 NGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSW 238
AL+LF M + V+ +I+ A G +E + ++ E + S+
Sbjct: 267 VRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESY 325
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
F L + + FI G AR +FDQ +D+ LW MI+GY K G ++ AR++
Sbjct: 144 FGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREM 203
Query: 98 FDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSV-------------- 138
FD+M ER+ W+ M+ Y +E LF +G SV
Sbjct: 204 FDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGAL 263
Query: 139 --STW------------------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
W + +V+ Y K +E A +F + ++ +WN M+ G
Sbjct: 264 TQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISG 323
Query: 179 YGQNGQIEKALDLFRRM 195
NG K+L+LF++M
Sbjct: 324 VALNGDARKSLELFQQM 340
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 47/257 (18%)
Query: 13 MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE 72
+HAH L H I P+ LA S+ + F+ +AR +F +
Sbjct: 23 LHAHILRCH--IQHSPY---ALAPILSVAATSNYTSFFL----------YARSIFHNLTH 67
Query: 73 RDMRLW--DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD 130
R+ + +TMI Y++ A + M + + N Y +IK L
Sbjct: 68 RNRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAV-----NNYTFPPLIKSCTALIA 122
Query: 131 GPDAEKS----------------VSTWSTMVNGYVK----INQIEEAERLFYEMPERKDV 170
S ++ + +V+G+++ + ++ +A LF + + V
Sbjct: 123 ASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVV 182
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
W M+ GYG+ G +E A ++F MPE RNVVSW+ ++ A R + F +MQ
Sbjct: 183 LWTAMIDGYGKIGDVESAREMFDEMPE--RNVVSWSAMMAAYSRVSEFREVLDLFLEMQS 240
Query: 231 ---RERDVSSWTTIVDC 244
R D T + C
Sbjct: 241 EGVRPNDSVLVTVLTAC 257
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 19/213 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDM----RLWDTMINGYIKCGMIKEARKLFDQMAER 104
S I LC G+ + D+M R + ++ +I+G K GM+ EAR++FD+M R
Sbjct: 230 SLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNR 289
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGYVKINQIEEA 157
+ T ++ GY G + AR+LFD ++ V T++ ++GY K+ ++ +A
Sbjct: 290 GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDA 349
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA 211
R+F EM V++N ++ + G++ A ++ + M ++V+ ++
Sbjct: 350 VRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDG 409
Query: 212 LVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
L + R++ A FNQ+ E DV S+T ++
Sbjct: 410 LCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 442
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
C + + C +G D AR++FD + E RD+ ++ I+GY K G +++A ++FD+M
Sbjct: 298 CTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMC 357
Query: 103 ERDTRLWTTMLNGYIEC----GMIK---EARKLFDGPDAEKSVSTWSTMVNGYVKINQIE 155
N I+C G + E K + T +++G K +++
Sbjct: 358 REGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLD 417
Query: 156 EAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTII 209
+A LF ++ E DV S+ I++ G + ++ +A++L R M ++V+++ +I
Sbjct: 418 QAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLI 477
Query: 210 KALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVDCL 245
L R GRI +A N+M + D +++ ++D L
Sbjct: 478 DGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDAL 515
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
L ++ C + LCK R D A +F+Q+ E D+ + +I+G + EA
Sbjct: 395 GLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEA 454
Query: 95 RKLFDQMAERD----TRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWSTMV 145
L M ++ ++ +++G G I A +L + GP + T+S ++
Sbjct: 455 MNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI--TYSILL 512
Query: 146 NGYVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER- 200
+ K ++EA LF +M +R DV + IM+ GY ++ +I++A++LFR M
Sbjct: 513 DALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLV 572
Query: 201 -NVVSWNTIIKALVRCGRIEDAQWHF 225
++V++ + A+ + G +W F
Sbjct: 573 PDIVTYTILFNAVFKSGS-NSYEWKF 597
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLF 98
+K CN +S L K + +VFD M D+ + T IN Y K G I EA LF
Sbjct: 209 SLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLF 268
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVK 150
+M E + + +++G + G ++EA +F G E V+ T+ +VNG VK
Sbjct: 269 LKMGEGGVLPNVVTYNNLIDGLCKSGRLEEAL-MFKGRMVENKVNPSLVTYGILVNGLVK 327
Query: 151 INQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKAL----DLFRRMPEPERNV 202
+ +EA + EM + + +N ++ GY + G ++ AL D+ + +P N
Sbjct: 328 FEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKP--NA 385
Query: 203 VSWNTIIKALVRCGRIEDA----QWHFNQMQERERDVSSWTTIVDC 244
V+ NT+++ R ++E A ++ + + D S+ + C
Sbjct: 386 VTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLC 431
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKC 88
RLA L N+ + LC+ G + V +M ER + L ++T+I G K
Sbjct: 480 RLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKS 539
Query: 89 GMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKE-ARKLFDGPD--AEKSVSTW 141
G I+EA KL ++M ++ DT + ++ G + G + + R L + D ++ T+
Sbjct: 540 GKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTY 599
Query: 142 STMVNGYVKINQIEEAERLF----YEMPERKDVSWNIMMGGYGQNGQIEKALDL--FRRM 195
+ M+ GY ++I+ A LF Y E V +NI++ + + G +A L R
Sbjct: 600 ALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRS 659
Query: 196 PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
+ ++++II + +E+A+ F +M+
Sbjct: 660 SNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMR 693
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 88/198 (44%), Gaps = 17/198 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N + L +G+ D +V + + ++ + M+ GY I A LF+++
Sbjct: 565 NFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVY 624
Query: 104 RDTRL----WTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
L + ++ + + G EA KL D + ++ T+S++++G + +EE
Sbjct: 625 NKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEE 684
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A+ +F EM + ++GGY + GQ+++ + + M + N +++ +I
Sbjct: 685 AKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMID 744
Query: 211 ALVRCGRIEDAQWHFNQM 228
+ G ++A N+M
Sbjct: 745 GYCKMGNTKEATKLLNEM 762
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 19/202 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I+ CK+ A KV D + ++++ ++TMI+ Y K GM++E L M E
Sbjct: 347 NALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLE 406
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + ++ G ++ A++L + + V T++ +++G K ++
Sbjct: 407 EGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRN 466
Query: 157 AERLFYEM----PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER---NVVSWNTII 209
AE+L EM + V++N +M GY G+++ AL++ +RM E ER NVV++N +I
Sbjct: 467 AEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRM-EKERKQPNVVTYNVLI 525
Query: 210 KALVRCGRIEDAQWHFNQMQER 231
K + ++E A N+M E+
Sbjct: 526 KGYCKINKLEAANGLLNEMLEK 547
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 119/259 (45%), Gaps = 33/259 (12%)
Query: 10 FILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQ 69
+L + L H + TR A + CN +S L KE + V+ +
Sbjct: 136 LVLAYVKNLELHCAYEAF----TR-AKDYGFKLSQTSCNPLLSALVKENKIGDVEYVYKE 190
Query: 70 MPER----DMRLWDTMINGYIKCGMIKEARKLFDQMA----ERDTRLWTTMLNGYIECGM 121
M +R ++ ++ ING + G + +A + M + T+++GY + G
Sbjct: 191 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYCKRG- 249
Query: 122 IKEARKLFDGPDAEKSV---------STWSTMVNGYVKINQIEEAERLFYEMPER----K 168
A K++ K + T++T+++G+ K + A++ F EM ++
Sbjct: 250 --SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
V++N ++ G NG++E+A+DL+ +M + N+V++N +I + +++A +
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLD 367
Query: 227 QMQERER--DVSSWTTIVD 243
+ ++E +V ++ T++D
Sbjct: 368 DVSKQELVPNVITFNTMID 386
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 26 GYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTM 81
G+ + L N +C I+ LC++ A+++ ++M + D+ ++ +
Sbjct: 397 GFSLCSSMLEEGILPNVSTYKC--LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNIL 454
Query: 82 INGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEA---RKLFDGPDA 134
I+G K + A KL ++M + + T+++GY G +K A RK +
Sbjct: 455 IDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRMEKERK 514
Query: 135 EKSVSTWSTMVNGYVKINQIEEAERLFYEMPER 167
+ +V T++ ++ GY KIN++E A L EM E+
Sbjct: 515 QPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 547
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 48/234 (20%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G+ + A KVFD+M R++ +W+ MING+ K G ++ KLF +M +R W M++
Sbjct: 157 GKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLA 216
Query: 118 E-------CGMIKE-ARKLFDGPDA-------------------------------EKSV 138
+ G+ +E + F+ DA K +
Sbjct: 217 QRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVI 276
Query: 139 STWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP 198
S +++V+ Y K +E A ++F EM ++ VSWN M+ G G NG+ E ++LF +M
Sbjct: 277 SVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKM--A 334
Query: 199 ERNVVSWNTIIKALVRC----GRIEDAQWHFNQMQERER---DVSSWTTIVDCL 245
+ V ++ ++ C G ++ + F+ M + + + + +VD L
Sbjct: 335 RKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLL 388
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 85 YIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTM 144
Y CG +++A K+FD+M R+ +W M+NG+ + G ++ KLF ++SV +W+ M
Sbjct: 153 YSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFK-RMGQRSVVSWNLM 211
Query: 145 VNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKA--LDLFRRMPEP 198
++ + + EA +F EM E+ D + ++ + G ++ + +
Sbjct: 212 ISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGL 271
Query: 199 ERNVVS-WNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
R V+S N+++ +CG +E A FN+M +++V SW ++ L
Sbjct: 272 LRKVISVGNSLVDFYCKCGNLEAAWKVFNEMT--KKNVVSWNAMISGL 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IH Y + L S+ NS + CK G + A KVF++M ++++ W+ MI+
Sbjct: 262 IHSYADGKGLLRKVISVG------NSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMIS 315
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIEC----GMIKEARKLFDGPDAEKSVS 139
G G + +LF++MA + + G + C G + + R++FD + +S
Sbjct: 316 GLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLS 375
Query: 140 T----WSTMVNGYVKINQIEEAERLFYEMPERKDVS-WNIMMGGYGQNGQIE----KALD 190
+ +V+ + ++EA L MP + + W ++ +G E A +
Sbjct: 376 PKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKE 435
Query: 191 LFRRMPEPERNVVSWNTI 208
L R P N V + +
Sbjct: 436 LVRLEPGNSGNYVLLSNV 453
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 114/218 (52%), Gaps = 21/218 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQM-- 101
N+ I+ LCK R A+++F +M + + + +I+G+ K G ++E L ++M
Sbjct: 168 NTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEK 227
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
E D +++ +++G+ G I+ ++LF+ + +V T+S ++N K + +E
Sbjct: 228 MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKE 287
Query: 157 AERLFYEMPE---RKDV-SWNIMMGGYGQNGQIE---KALDLFRRMPEPERNVVSWNTII 209
A ++ M R DV ++ ++ G +NG+ K LDL + E E N V++N II
Sbjct: 288 AAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE-EPNNVTYNAII 346
Query: 210 KALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
L + GR++DA M ++ + DV +++T+V L
Sbjct: 347 NGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 109/219 (49%), Gaps = 21/219 (9%)
Query: 29 FLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMING 84
L ++ F + ++ N I LCK+ R HA++V+ M ER ++ ++ +I+G
Sbjct: 396 LLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDG 455
Query: 85 YIKCGMIKEARKL----FDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KS 137
Y+ G + +A +L D + +T ++NG + M+ A+ LF+ A +
Sbjct: 456 YLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPT 515
Query: 138 VSTWSTMVNGYVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKA----L 189
VS ++T++ + + +E+A LF EM VS+NI++ G + G +E A L
Sbjct: 516 VSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLL 575
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
++ P+ ++++ +I ++ G++++A + +M
Sbjct: 576 EMLNMNLVPDN--ITFSILINRFLKLGQLDEAASLYERM 612
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 54/229 (23%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I+ LCKEGR D A + + M ++ D+ + T++ G G I EA L + +
Sbjct: 343 NAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMS 402
Query: 104 RD--------------------------TRLWTTM---------------LNGYIECGMI 122
++ R++ TM ++GY+ G +
Sbjct: 403 KEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKL 462
Query: 123 KEARKLF-DGPDAEKS--VSTWSTMVNGYVKINQIEEAERLFYE---MPERKDVS-WNIM 175
+A +L+ D D+ S +T++ ++NG K+ + A+ LF + R VS +N +
Sbjct: 463 TKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTL 522
Query: 176 MGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQ 222
M + +E+A +LF+ M + +VVS+N II ++ G +E A+
Sbjct: 523 MASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAK 571
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 17/201 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I R C + + D A +VF+ M R D+ + ++I+G+ K I +A L D+M +
Sbjct: 341 NSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIK 400
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV---STWSTMVNGYVKINQIEE 156
D WTT++ G+ + G A++LF V T + +++G K + E
Sbjct: 401 VGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSE 460
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A LF+ M + V ++I++ G G++ AL+LF +P + NV ++ +I
Sbjct: 461 ALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMIN 520
Query: 211 ALVRCGRIEDAQWHFNQMQER 231
+ G ++ A+ + M+E
Sbjct: 521 GFAKQGLLDKAEDLLSNMEEN 541
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 110/224 (49%), Gaps = 27/224 (12%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARKLF 98
+++ N + LCKEG+ A+ V M D+ ++++I+ Y + EA ++F
Sbjct: 301 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 360
Query: 99 DQMAER----DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNG 147
+ M R D +T++++G+ + I +A L D PD V TW+T++ G
Sbjct: 361 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPD----VVTWTTLIGG 416
Query: 148 YVKINQIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
+ ++ + A+ LF M + V + I++ G ++ + +AL LF M + + N
Sbjct: 417 FCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLN 476
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
+V ++ I+ + G++ A F+ + + + +V ++T +++
Sbjct: 477 IVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMIN 520
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 61/268 (22%)
Query: 22 PLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTM 81
P H YPF+ A FSL EG+ HA V E D + +++
Sbjct: 83 PDKHTYPFVLKACAYLFSL---------------FEGKQVHAH-VLKLGFELDTYICNSL 126
Query: 82 INGYIKCGMIKEARKLFDQMAE-RDTRLWTTMLNGYIECG-------MIKEARKLFD--- 130
I+ Y CG ++ ARK+FD+M E R+ W M++ Y + G M E K+++
Sbjct: 127 IHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYEPDC 186
Query: 131 ----------GPDAEKSVSTW--------------------STMVNGYVKINQIEEAERL 160
G S+ W + +V+ Y K +E A+++
Sbjct: 187 YTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQV 246
Query: 161 FYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC---GR 217
F M R SWN ++ G+ +G+ + ALD F RM + E+ V + T + L C G
Sbjct: 247 FEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGM 306
Query: 218 IEDAQWHFNQMQERERDVSSWTTIVDCL 245
+++ +F +M +E +V CL
Sbjct: 307 VDEGLMYF-EMMTKEYNVEPSLVHYGCL 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 50 FISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----- 104
+ CK G + A++VF+ M RD+ W+++I G+ G K A F +M +
Sbjct: 230 LVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVP 289
Query: 105 DTRLWTTMLNGYIECGMIKEARKLFD----GPDAEKSVSTWSTMVNGYVKINQIEEAERL 160
++ + +L+ GM+ E F+ + E S+ + +V+ Y + I+EA +
Sbjct: 290 NSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNV 349
Query: 161 FYEMPERKD-VSWNIMMGG-YGQNGQIEKALDLFRRMPEPERNV 202
EMP + D V W ++ Y Q+ +E + ++ +++ E +V
Sbjct: 350 VSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSV 393
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HGY ++ +LN + I K G ARKVFD + E+D+ LW+ +I
Sbjct: 233 LHGYCI---KIGFCCNLNV----VTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIK 285
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNG----YIECGMIKEAR---KLFDGPDAEK 136
Y + +++EA L M + + ++ L G Y G ++ R L + E
Sbjct: 286 NYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKLEL 345
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRRM 195
V + +V+ Y K ++EA +F M E KDV SW ++ G+G +GQ A+ LF RM
Sbjct: 346 DVILGTALVDVYAKCGFLDEAMEIFERM-ENKDVKSWTAVISGHGIHGQAINAISLFNRM 404
Query: 196 PEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIVDCL 245
N +++ I+ A G + + F +M + E S W CL
Sbjct: 405 ENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQ-EHGFSPWVEHYGCL 455
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
E D+ L +++ Y KCG + EA ++F++M +D + WT +++G+ G A LF+
Sbjct: 344 ELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQAINAISLFNR 403
Query: 132 PDAEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNG 183
+ E + T+ ++ + E F M + S + ++ G+ G
Sbjct: 404 MENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLLGRAG 463
Query: 184 QIEKALDLFRRMPEPERNVVSWNTIIKA 211
+ +A +L + +P + + SW T++ A
Sbjct: 464 MLHEAFELIKSLP-IKGDATSWRTLLSA 490
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 113/215 (52%), Gaps = 23/215 (10%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER 104
S ++ C++G D A VF + +R +++T+I G + G+I A +L ++MAE+
Sbjct: 361 SLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK 420
Query: 105 DTR--LWT--TMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEA 157
+ +WT ++NG + G + +A L + + T++T+V+GY + +++ A
Sbjct: 421 GCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSA 480
Query: 158 ERLFYEM------PERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTII 209
L M P+ +++N ++ G + + E+ +++F+ M E N++++NTII
Sbjct: 481 IELVNRMWSQGMTPDV--ITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTII 538
Query: 210 KALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIV 242
++L ++ +A +M+ + DV S+ T++
Sbjct: 539 ESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 573
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ I LC++G A ++ ++M E+ D+ ++ +ING K G + +A L
Sbjct: 395 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 454
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + T+++GY + A +L + V T++T++NG K + EE
Sbjct: 455 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 514
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
+F M E+ +++N ++ + ++ +A+DL M +VVS+ T+I
Sbjct: 515 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 574
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWTT 240
+ G ++ A F M E++ DVS T
Sbjct: 575 GFCKVGDLDGAYGLFRGM-EKQYDVSHTTA 603
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N + LCK+G + ++FD++ +R ++ ++ I G K G + A +L ++
Sbjct: 220 NKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSR 279
Query: 104 RDTRLWTTMLNGYIECGMIKEAR---------KLFDGPDAEKSVSTWSTMVNGYVKINQI 154
R N I CG+ +++R K+ +G E + T++++++GY K +
Sbjct: 280 EGLRPDVVTYNTVI-CGLCRKSRVVEAEECLHKMVNG-GFEPNDFTYNSIIDGYCKKGMV 337
Query: 155 EEAERLF----YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR-MPEPER-NVVSWNTI 208
+A R+ ++ + + ++ ++ G+ Q+G ++A+ +F+ + + R +++ +NT+
Sbjct: 338 VDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTL 397
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
IK L + G I A N+M E+ WT
Sbjct: 398 IKGLCQQGLILPALQLMNEMAEKGCKPDIWT 428
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 31/231 (13%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVF----DQMPERDMRLWDTMINGYIKCGMIKE 93
F+ + + N+ ++ L + G + A KV+ D+ E D+ + I + + G
Sbjct: 105 FNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYA 164
Query: 94 ARKLFDQM----AERDTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWS 142
A +L M + + T++ G+ E G AR+LFD PD V+T++
Sbjct: 165 ALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPD----VTTFN 220
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLF----RR 194
+V+ K + E+ERLF ++ +R ++NI + G + G +++A+ L R
Sbjct: 221 KLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSRE 280
Query: 195 MPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVD 243
P+ VV++NT+I L R R+ +A+ ++M E + ++ +I+D
Sbjct: 281 GLRPD--VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 329
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 118/225 (52%), Gaps = 18/225 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP---ERDMRLWDTMINGYIKCGMIKEAR 95
+ ++ CN+ ++ LCK G+ D + +++++M R++ ++ + G + G + E
Sbjct: 323 GVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVFLKGLFENGKVDEVI 382
Query: 96 KLFDQMAERDTRLWTT----MLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGY 148
+++ + E D + +T +++G + G + +A ++ +G D + +S+M+NG
Sbjct: 383 NVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGL 442
Query: 149 VKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNV 202
+ +++EA ++ M +R +N ++ G+ +N +++ A+ +FR M NV
Sbjct: 443 CREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNV 502
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
V++N +I R R +A +M E+ + D+ +++T++D L
Sbjct: 503 VTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGL 547
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 108/208 (51%), Gaps = 17/208 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I+ K + A +VFD+M ER D+ ++ +I+G+ K G + + +++++
Sbjct: 192 TLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRV 251
Query: 105 DTRL-----WTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
+T + M++G CG KE+ ++++ D + T+S +++G + ++
Sbjct: 252 ETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDG 311
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE-PERNVVSWNTIIKA 211
A +++ EM R V+ N M+ G + G+++++ +L+ M RNVVS+N +K
Sbjct: 312 ARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVFLKG 371
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWT 239
L G++++ + ++E + DV S T
Sbjct: 372 LFENGKVDEVINVWEVLREMDCDVESTT 399
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 28/222 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE 103
+S I+ LC+EGR D A KV + M +R +L ++ +I+G++K + A ++F +M+
Sbjct: 436 SSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMST 495
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYV--K 150
+ + ++NG+ EA + PD + T+ST+++G K
Sbjct: 496 NGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPD----LITYSTLIDGLCQGK 551
Query: 151 INQIEEAERLFYEMPERK---DVSW-NIMMGGYGQNGQIEKALDLFRRMPEPE-RNVVSW 205
+N+ + A RL Y+ + D++ NI++ +G+++ AL L+ M + N+V+
Sbjct: 552 MNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANLVTH 611
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
NTI++ + G E A + Q+ E + D+ S+ ++ L
Sbjct: 612 NTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGL 653
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 118/225 (52%), Gaps = 18/225 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMP---ERDMRLWDTMINGYIKCGMIKEAR 95
+ ++ CN+ ++ LCK G+ D + +++++M R++ ++ + G + G + E
Sbjct: 323 GVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVFLKGLFENGKVDEVI 382
Query: 96 KLFDQMAERDTRLWTT----MLNGYIECGMIKEARKLFDGPDA---EKSVSTWSTMVNGY 148
+++ + E D + +T +++G + G + +A ++ +G D + +S+M+NG
Sbjct: 383 NVWEVLREMDCDVESTTYGILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGL 442
Query: 149 VKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNV 202
+ +++EA ++ M +R +N ++ G+ +N +++ A+ +FR M NV
Sbjct: 443 CREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNV 502
Query: 203 VSWNTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
V++N +I R R +A +M E+ + D+ +++T++D L
Sbjct: 503 VTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGL 547
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 108/208 (51%), Gaps = 17/208 (8%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I+ K + A +VFD+M ER D+ ++ +I+G+ K G + + +++++
Sbjct: 192 TLINLFVKIRDLNSALEVFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRV 251
Query: 105 DTRL-----WTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
+T + M++G CG KE+ ++++ D + T+S +++G + ++
Sbjct: 252 ETVFPSVVSYNIMISGLCRCGRFKESLEIWERMKMNDWKHDAFTYSALIHGLCEGGDLDG 311
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE-PERNVVSWNTIIKA 211
A +++ EM R V+ N M+ G + G+++++ +L+ M RNVVS+N +K
Sbjct: 312 ARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCGSRNVVSYNVFLKG 371
Query: 212 LVRCGRIEDAQWHFNQMQERERDVSSWT 239
L G++++ + ++E + DV S T
Sbjct: 372 LFENGKVDEVINVWEVLREMDCDVESTT 399
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 28/222 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE 103
+S I+ LC+EGR D A KV + M +R +L ++ +I+G++K + A ++F +M+
Sbjct: 436 SSMINGLCREGRLDEAAKVLNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMST 495
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD-------GPDAEKSVSTWSTMVNGYV--K 150
+ + ++NG+ EA + PD + T+ST+++G K
Sbjct: 496 NGCSPNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPD----LITYSTLIDGLCQGK 551
Query: 151 INQIEEAERLFYEMPERK---DVSW-NIMMGGYGQNGQIEKALDLFRRMPEPE-RNVVSW 205
+N+ + A RL Y+ + D++ NI++ +G+++ AL L+ M + N+V+
Sbjct: 552 MNENDTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCANLVTH 611
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
NTI++ + G E A + Q+ E + D+ S+ ++ L
Sbjct: 612 NTIMEGFYKIGDCEKASKIWAQISEDGLKPDIISYNITLNGL 653
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLFDQMAE 103
+S I C +G D A VFD+M E+D+ ++ +ING + + EA KLF ++
Sbjct: 273 SSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNR 332
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
R + T++ GY + I A +L++ +V T++T++ GY K+ +
Sbjct: 333 VGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAG 392
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A L EM ER V++ I++ G+ + +EKA ++ M + +V ++ +I
Sbjct: 393 ALNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGVLIH 452
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
L G +++A F + E
Sbjct: 453 GLCMNGSMKEASKLFKSLDE 472
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 104/246 (42%), Gaps = 57/246 (23%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDM----RLWDTMINGYIKCGMIKE----------- 93
+ I CK G A+K+F +M D+ + +ING+ K G+ KE
Sbjct: 204 TLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKLS 263
Query: 94 ------------------------ARKLFDQMAERDTRL----WTTMLNGYIECGMIKEA 125
A +FD+M E+D + ++NG + EA
Sbjct: 264 GIVPNVYTYSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEA 323
Query: 126 RKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGG 178
KLF + ++ T++T++ GY +I+ A RL+ E+ V++N ++ G
Sbjct: 324 VKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAG 383
Query: 179 YGQNGQIEKALDLFRRMPEPERNV----VSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
Y + G + AL+L + M ERN+ V++ ++ VR +E A + + + E+
Sbjct: 384 YSKVGNLAGALNLVKEM--EERNIAPTKVTYTILLNGFVRINYMEKA-FEIHSLMEKSGL 440
Query: 235 VSSWTT 240
VS T
Sbjct: 441 VSDVYT 446
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 66 VFDQMPER---DMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIE 118
VFD++ + D+ + MI G + G + ++ +L M + + ++TT+++G +
Sbjct: 152 VFDELKNKVVLDVYSFGIMIKGCCEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGCCK 211
Query: 119 CGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV----S 171
G + A+KLF G D + T+S ++NG+ K +E +++ M V +
Sbjct: 212 NGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYT 271
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGRIEDAQWHF 225
++ ++G Y +G I+KA ++F M E + +++++N +I L R ++ +A F
Sbjct: 272 YSSVIGEYCNDGSIDKAFNVFDEMREKDIACSIMTYNLLINGLCRMKKLGEAVKLF 327
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPE----RDMRLWDTMINGYIKCGMIKEARKLF 98
+ CN+ + L + GR A +F+ + + D ++ ++ Y K G I +A +L
Sbjct: 479 SIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLL 538
Query: 99 DQM----AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKI 151
+M E D + +++N + G + A K+F K +V T++ ++ G K
Sbjct: 539 SEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKE 598
Query: 152 NQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN--VVSW 205
+I +A LF M E +++N ++ +N ++ AL +F RM N V+++
Sbjct: 599 GKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTY 658
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQE 230
NTII L+R GRI+ A W F+QM++
Sbjct: 659 NTIIYGLIREGRIDYAFWFFHQMKK 683
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 117/252 (46%), Gaps = 32/252 (12%)
Query: 20 THPLIHGYPFL------RTRLASTFSLNTEMKR--C-------NSFISRLCKEGRTDHAR 64
THP Y L R+ + L +EM+ C N IS L K + A
Sbjct: 827 THPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKAL 886
Query: 65 KVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGY 116
++ ++ D + +I+G +K G ++A K+F++M + ++ ++ ++NG+
Sbjct: 887 DLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGF 946
Query: 117 IECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEEAERLFYEMP----ERKD 169
+ G I A +LF E + +++ +V +I+EA + F E+ +
Sbjct: 947 GKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDT 1006
Query: 170 VSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
VS+N ++ G G++ ++++AL LF M ++ ++N +I L G+++ A + +
Sbjct: 1007 VSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEE 1066
Query: 228 MQERERDVSSWT 239
+Q + S +T
Sbjct: 1067 LQLVGLEPSVFT 1078
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 111/232 (47%), Gaps = 19/232 (8%)
Query: 33 RLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKC 88
+ ++ ++ N + L T+ A ++F+ M ++ +++ + K
Sbjct: 785 KFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKS 844
Query: 89 GMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTW 141
I + L+ +M R + +++ ++ + +A L+ D + T+
Sbjct: 845 KRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTY 904
Query: 142 STMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
+++G +K + E+A ++F EM + V +NI++ G+G++G+I+ A +LF++M +
Sbjct: 905 GPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVK 964
Query: 198 P--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ--ERERDVSSWTTIVDCL 245
++ S+ +++ L GRI++A +F +++ + D S+ I++ L
Sbjct: 965 EGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 50 FISRLCKEGRTDHARKVFDQM------PERDMRLWDTMINGYIKCGMIKEARKLFDQMA- 102
I LC G+ D A++++ +M P+R + T+++ + K G ++ ++ +++M
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDR--VTYITLMDKFGKVGDLETVKRFWNEMEV 368
Query: 103 ---ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEE 156
D +T ++ + G + A + D + ++ T++TM+ G +K +++E
Sbjct: 369 DGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDE 428
Query: 157 AERLFYEMP----ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIK 210
A L M + S+ + + YG++G KA+D F M + ++ + N +
Sbjct: 429 ALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLY 488
Query: 211 ALVRCGRIEDAQWHFNQMQE--RERDVSSWTTIVDC 244
L GRI +A+ FN + + D ++ ++ C
Sbjct: 489 TLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKC 524
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 111/219 (50%), Gaps = 21/219 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERD----MRLWDTMINGYIKCGMIKEARKLFDQM-- 101
NS I C G+ + A +F++M ++ + ++ +++G K G +K A+ + M
Sbjct: 234 NSLIYGFCIVGQFEEAVGLFNEMILKNTNPNVYTFNILVDGLCKEGEVKRAKSVLTVMIK 293
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEE 156
E D + ++++GY + +A +FD +V ++S M+NG K+ ++E
Sbjct: 294 QHVEPDVVTYNSLMDGYFLVKEVNKATYVFDTLARRGVTPNVRSYSVMINGLCKVKMVDE 353
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER----NVVSWNTI 208
A LF EM + +++N ++ G ++G+I L M + +V +++ +
Sbjct: 354 AVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDVWYLIDEMQIKDLGVKPDVYTYSIL 413
Query: 209 IKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
I L + GRI DA + ++M +R + +V ++T+++D L
Sbjct: 414 IDRLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGL 452
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 55/247 (22%)
Query: 41 NTEMKRCNSFISRLCKEGRTDHARKVFDQM----PERDMRLWDTMINGYIKCGMIKEARK 96
N + N + LCKEG A+ V M E D+ ++++++GY + +A
Sbjct: 262 NPNVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATY 321
Query: 97 LFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF-------------------DG-- 131
+FD +A R + R ++ M+NG + M+ EA LF DG
Sbjct: 322 VFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLC 381
Query: 132 -------------------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKD--- 169
+ V T+S +++ K +I +A L EM +R
Sbjct: 382 KSGRISDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPAN 441
Query: 170 -VSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDA-QWHF 225
V++ ++ G +N ++KA+ LF +M + E NV ++N +I L + GRI DA W++
Sbjct: 442 VVTYTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADACVWNW 501
Query: 226 NQMQERE 232
M+ +E
Sbjct: 502 LIMERKE 508
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 117/227 (51%), Gaps = 30/227 (13%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRL----WDTMINGYIKCGMIKEARKLF----DQ 100
S I LC +G+ A D++ R + T+ING K G + A +L +
Sbjct: 50 SLIKGLCLKGQIHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGK 109
Query: 101 MAERDTRL------WTTMLNGYI-----ECGMIKEARKLFDG---PDAEKSVSTWSTMVN 146
+ + D + ++ +++G+ + G +KEA+ +F + +V T+S++++
Sbjct: 110 LVQPDVGISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMD 169
Query: 147 GYVKINQIEEAERLFYEMPE---RKDV-SWNIMMGGYGQNGQIEKALDLFRRMP--EPER 200
GY + ++ +A+ +F M + D+ S+NI++ G+ + + A++LF M +
Sbjct: 170 GYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIP 229
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
NVV++N++I L + G+I A ++M +R + D+ ++++++D L
Sbjct: 230 NVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDAL 276
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
+N +++ N I+ CK TD A +F++M R ++ ++++I+G K G I A
Sbjct: 191 GVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYA 250
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNG 147
KL D+M +R D ++++L+ + + +A L + ++ T++ ++NG
Sbjct: 251 LKLVDEMHDRGQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILING 310
Query: 148 YVKINQIEEAERLFYEMPERK---DV-SWNIMMGGYGQNGQIEKALDLFRRMPEPE--RN 201
K + E+A+ +F ++ + +V ++ +M+ + NG +AL + +M E N
Sbjct: 311 LCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPN 370
Query: 202 VVSWNTIIKAL 212
V++ II++L
Sbjct: 371 AVTYEIIIRSL 381
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 114/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
++ I LCK+ A ++ QM + D+ ++T++ G + G +KEA LF+QM
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + +++G + G +K+AR + + V T++++++GY + Q +
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242
Query: 157 AERLFYEMPER---KDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A +F M R DV S+++M+ G + +++A++L + M N V+++++I
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302
Query: 211 ALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
L + GRI DA N+M R + DV ++ +++D L
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDAL 339
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 109/212 (51%), Gaps = 29/212 (13%)
Query: 58 GRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLW 109
GR A +F+QM + D+ ++ +++G K G +K+AR + M ++ D +
Sbjct: 168 GRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITY 227
Query: 110 TTMLNGYIECGMIKEARKLFDG-------PDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
++++GY +A +F+ PD V ++S M+NG K ++EA L
Sbjct: 228 NSLMDGYFLVKQENKATFVFNTMARRGVTPD----VHSYSVMINGLCKTKMVDEAVNLLK 283
Query: 163 EMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRM---PEPERNVVSWNTIIKALVRC 215
EM + V+++ ++ G ++G+I A DL M +P +V+++N+++ AL +
Sbjct: 284 EMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPA-DVITYNSLLDALCKN 342
Query: 216 GRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
+++ A +++++ + D+ ++T +VD L
Sbjct: 343 HQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 43/228 (18%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
C + I K GR + R VFD M E+++ ++I+GY+ G +A +F + ++D
Sbjct: 180 CTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDV 239
Query: 107 RLWTTMLNGY--------------------------------IECGMIKEARKLFDGPDA 134
++ M+ GY I + A ++ + A
Sbjct: 240 VVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQA 299
Query: 135 E-------KSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEK 187
+ + S +++ Y K ++ +A+R+F M E+ SW M+ GYG+NG ++
Sbjct: 300 QLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDE 359
Query: 188 ALDLFRRMPEPERNVVSWNTIIKALVRC---GRIEDAQWHFNQMQERE 232
AL+LF++M ++ T + AL C G +E W Q E E
Sbjct: 360 ALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERG-WEIFQSMESE 406
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 133/323 (41%), Gaps = 91/323 (28%)
Query: 5 LPPLSFIL-MHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHA 63
+PP +F H +N+ HG L + F NT + + K +A
Sbjct: 34 IPPSTFFSNTLQHYINSQTPSHGQKIHSHILKTGFVPNTNISI--KLLILYIKSHSLRYA 91
Query: 64 RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA--------------------- 102
R+VFD + +R + ++ MI GY+K G + E+ LF Q++
Sbjct: 92 RQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNR 151
Query: 103 ----------------------ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVST 140
E+D L T +++ Y++ G + R +FD +EK+V +
Sbjct: 152 VSNGMVGDLGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFD-VMSEKNVIS 210
Query: 141 WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQ-----IEKALDLFRRM 195
+++++GY+ ++AE +F + ++ V +N M+ GY + + +E +D+ R
Sbjct: 211 STSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLN 270
Query: 196 PEPERNVVSWNTIIKA-----------------------------------LVRCGRIED 220
P N+ ++ +II A +CGR+ D
Sbjct: 271 FRP--NLSTFASIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVID 328
Query: 221 AQWHFNQMQERERDVSSWTTIVD 243
AQ F+ M E++V SWT+++D
Sbjct: 329 AQRVFDHM--LEKNVFSWTSMID 349
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 110/216 (50%), Gaps = 28/216 (12%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N ++ K GR AR VFD++ +R + W +++GY + G EA ++FDQM + D +
Sbjct: 184 NGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVK 243
Query: 108 L-WTTMLN---GYIECGMIKEARKLF---------DGPDAEKSVSTWSTMVNGYVKINQI 154
W ++++ Y + +++ R L + PD S++ + Y K ++
Sbjct: 244 PDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAF------YAKCGEV 297
Query: 155 EEAERLFYEMPE-RKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV----VSWNTII 209
A+ F +M K + WN M+ GY +NG E+A++LF+ M RN+ ++ + +
Sbjct: 298 TVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAM--ISRNIKPDSITLRSAV 355
Query: 210 KALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVD 243
A + G ++ AQW + +++ + D+ TT++D
Sbjct: 356 LACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLID 391
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 49 SFISRLCKEGRTDHARKVFDQM--PERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
S + K G A+ FD+M P + M +W+ MI+GY K G +EA +LF M R+
Sbjct: 286 SLTAFYAKCGEVTVAKSFFDKMKTPNKVM-MWNAMISGYAKNGHAEEAVELFQAMISRNI 344
Query: 107 RLWTTMLNGYI----ECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEEAER 159
+ + L + + G +K A+ + D K + +T+++ Y K +E A
Sbjct: 345 KPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARL 404
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCGR 217
+F + V W+ M+ GYG +GQ +A+ L+ M + N V++ ++ A G
Sbjct: 405 VFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGL 464
Query: 218 IEDAQWHFNQMQE---RERDVSSWTTIVDCL 245
I+ F+ M++ + R+ ++ +VD L
Sbjct: 465 IKQGWELFHCMRDFGIKPRN-EHYSCVVDLL 494
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 61 DHARKVFDQMPER-DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNG 115
D A +FD+MPE + L +I + K ++A LF +M R + T+LN
Sbjct: 110 DVACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNT 169
Query: 116 YIECGMIKEARKLFDGPDAEKS----VSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS 171
G + +++ G + S V S +V+ YVK++ IEEA++ F + VS
Sbjct: 170 STRLGKVGVGKQI-HGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVS 228
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
+ ++GGY ++G+ E AL +F M PERNV+SWN ++ + G E+A F M
Sbjct: 229 YTTLIGGYLKSGRFEDALRVFNEM--PERNVISWNAMVGGCSKIGHNEEAVKFFIDM 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 48/237 (20%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE--- 103
I+ K+ R + A +F +M +R + T++N + G + +++ +
Sbjct: 132 ITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTSL 191
Query: 104 -RDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
+ + + +++ Y++ I+EA+K F+ + VS ++T++ GY+K + E+A R+F
Sbjct: 192 CSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVS-YTTLIGGYLKSGRFEDALRVFN 250
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM---------------PEPERNVVSW-- 205
EMPER +SWN M+GG + G E+A+ F M N+ S
Sbjct: 251 EMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGF 310
Query: 206 --------------------NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
N++I +CG ++D+ F+++ +R+V SW ++
Sbjct: 311 GRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKIC--KRNVVSWNAVI 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 47/246 (19%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG ++T L S + + + + K + A+K F+ ++ + T+I
Sbjct: 182 IHGCA-IKTSLCSNVFVGSAL------VDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIG 234
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DG------- 131
GY+K G ++A ++F++M ER+ W M+ G + G +EA K F +G
Sbjct: 235 GYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNEST 294
Query: 132 -PDAEKSVSTWS-------------------------TMVNGYVKINQIEEAERLFYEMP 165
P A + S + ++++ Y K ++++ +F ++
Sbjct: 295 FPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKIC 354
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQW 223
+R VSWN ++ GY NG+ +A+ LF RM + N VS ++ A G +++
Sbjct: 355 KRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFL 414
Query: 224 HFNQMQ 229
+FN+ +
Sbjct: 415 YFNKAR 420
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN 114
C+ HA V +P RD+ W +I+G + G+ EA + +M E + N
Sbjct: 498 CRCKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMMEEGV-----LPN 552
Query: 115 GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
Y +K KL + P A +V S ++ Y K I +A ++F MPER VSW
Sbjct: 553 SYTYSSALKACAKL-ETP-ALSNVFVNSALIYMYAKCGYIADAFQVFDNMPERNLVSWKA 610
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE--DAQWHFNQMQERE 232
M+ GY +NG KAL L RM E VV + L CG I+ D W ++
Sbjct: 611 MILGYARNGHCRKALQLMYRM-RAEGFVVDDYILTTVLTACGGIDSGDIDW---DLESSS 666
Query: 233 RDVSSWTTI 241
D+ S +
Sbjct: 667 HDLHSLPAV 675
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 48/222 (21%)
Query: 41 NTEMKRCNSFISRLCKE-----GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
N++M C F++ CK G+ HAR + + R++ + ++N Y KCG I A
Sbjct: 250 NSKMFVC--FMNLCCKRVDLALGKQIHARIL--KSNWRNLIVDSAVVNFYSKCGKISSAF 305
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEA-----RKLFDG--PD--------------- 133
+ FD+MA+RD WTT++ + G+ EA + L DG P+
Sbjct: 306 RTFDRMAKRDVVCWTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENK 365
Query: 134 ----------------AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMG 177
+ V +++++ Y K +I ++++F M R +W ++
Sbjct: 366 AFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIIS 425
Query: 178 GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIE 219
GY +NG E+AL+ FR M ++ V+ +T++ + CG I+
Sbjct: 426 GYARNGFGEEALNFFRLMKR-KKVYVNKSTLVCVMTACGTIK 466
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 94/238 (39%), Gaps = 45/238 (18%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N+ I + G+ ARKVFD M R+ W +I+GY+K + EA KLF + +
Sbjct: 189 NNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLKYDLDDEAFKLFHGSIKHGVQ 248
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTW------STMVNGYVKINQIEEAERLF 161
+ M ++ + L A S W S +VN Y K +I A R F
Sbjct: 249 PNSKMFVCFMNLCCKRVDLALGKQIHARILKSNWRNLIVDSAVVNFYSKCGKISSAFRTF 308
Query: 162 YEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM------PEP----------------- 198
M +R V W ++ Q+G +AL L +M P
Sbjct: 309 DRMAKRDVVCWTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENKAFK 368
Query: 199 --------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ +V ++I +CG I ++ F++M + R+ ++WT+I+
Sbjct: 369 CGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRM--KVRNTATWTSII 424
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
S I K G ++KVFD+M R+ W ++I+GY + G +EA F M +
Sbjct: 390 TSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARNGFGEEALNFFRLMKRKKVY 449
Query: 108 L-WTTMLNGYIECGMIKEARKLFDGPDAEKSVSTW-------STMVNGYVKINQIEEAER 159
+ +T++ CG IK A + A+K S +T+V Y + A
Sbjct: 450 VNKSTLVCVMTACGTIK-ASLIGREVHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAFN 508
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE---------------------- 197
+ +P R VSW ++ G + G +AL+ R M E
Sbjct: 509 VLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMMEEGVLPNSYTYSSALKACAKLET 568
Query: 198 -PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
NV + +I +CG I DA F+ M ER++ SW ++
Sbjct: 569 PALSNVFVNSALIYMYAKCGYIADAFQVFDNMP--ERNLVSWKAMI 612
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 121/251 (48%), Gaps = 54/251 (21%)
Query: 49 SFISRLCKEGRTDHA----RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER 104
+ I+ LCK G T A R+V ++ + D+ +++T+I+G K + +A L+ +MA +
Sbjct: 12 TLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMASK 71
Query: 105 ----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK------------------------ 136
D + +++G+ G +K+A LF+ ++
Sbjct: 72 RIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGNVKEA 131
Query: 137 --------------SVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV----SWNIMMGG 178
+ T+S++++GY +N++ A+ +F M R S+NIM+ G
Sbjct: 132 KNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMING 191
Query: 179 YGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--D 234
+ + ++A++LF M + +VV++N++I L + G+I A ++M +R + D
Sbjct: 192 FCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPD 251
Query: 235 VSSWTTIVDCL 245
+ ++++++D L
Sbjct: 252 IITYSSLLDAL 262
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEA 94
++N + N + CKEG A+ V M ++ + + ++++GY + A
Sbjct: 107 NINPTVYTFNILVDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNA 166
Query: 95 RKLFDQMAERDT--RLWT--TMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +F M+ R +W+ M+NG+ + M EA LF+ K V T+++++NG
Sbjct: 167 KGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLING 226
Query: 148 YVKINQIEEAERLFYEMPERKD----VSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K +I A +L EM +R ++++ ++ +N Q++KA+ L + + N
Sbjct: 227 LCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPN 286
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+ ++ +I L + GR+EDA F + + +++ T V
Sbjct: 287 MYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 115/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ IS C G+ A +F++M +++ ++ +++ + K G +KEA+ + M +
Sbjct: 81 NALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGNVKEAKNVLAMMMK 140
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPD---AEKSVSTWSTMVNGYVKINQIEE 156
+ + ++++++GY + A+ +F +V +++ M+NG+ KI +E
Sbjct: 141 QGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDE 200
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A LF EM RK V++N ++ G ++G+I AL L M + + +++++++++
Sbjct: 201 AMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLD 260
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
AL + +++ A ++++ ++ ++T ++D L
Sbjct: 261 ALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGL 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/175 (18%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 78 WDTMINGYIKCGMIKEA----RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPD 133
+ T+ING K G K A R++ ++ + D ++ T+++G + + +A L+
Sbjct: 10 YGTLINGLCKVGETKAALELLRRVDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMA 69
Query: 134 AEK---SVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGGYGQNGQIE 186
+++ V T++ +++G+ + ++++A LF +M + ++NI++ + + G ++
Sbjct: 70 SKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDAFCKEGNVK 129
Query: 187 KALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
+A ++ M + N V++++++ + +A+ F+ M R + W+
Sbjct: 130 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 184
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM--AERD 105
N+ + + GR + AR +F M +D+ W+TMI GY+ CG +A L M + +
Sbjct: 429 NALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAE 488
Query: 106 TRLWT--------------------TMLNGYIECGMIKEARKLFDGPDAE---KSVSTWS 142
R+ T T+L G + + +++ + K V+ S
Sbjct: 489 HRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGS 548
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP---- 198
+V+ Y K + + +F +M R ++WN+++ YG +G+ E+AL LFRRM E
Sbjct: 549 ALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNN 608
Query: 199 ---ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
N V++ I +L G +++ F M+ + E + +VD L
Sbjct: 609 REIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLL 661
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 94/189 (49%), Gaps = 16/189 (8%)
Query: 36 STFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEAR 95
++ +L T + C + + +G+ HA V QM +D+ + +++ Y KCG + +R
Sbjct: 508 NSVTLMTVLPGCAALAA--LGKGKEIHAYAV-KQMLSKDVAVGSALVDMYAKCGCLNLSR 564
Query: 96 KLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVK 150
+F+QM+ R+ W ++ Y G +EA KLF +G + + T + +
Sbjct: 565 TVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFAS 624
Query: 151 INQ---IEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQIEKALDLFRRMPEPERNV 202
++ ++E LFY M + + + ++ G++GQIE+A +L + MP + V
Sbjct: 625 LSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKV 684
Query: 203 VSWNTIIKA 211
+W++++ A
Sbjct: 685 DAWSSLLGA 693
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 90/234 (38%), Gaps = 45/234 (19%)
Query: 1 MAKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT 60
+A LP S H L IH + + L + C + + C +
Sbjct: 290 LASVLPACS----HLEMLGCGKEIHAFVLMNNDL-----IENSFVGC-ALVDMYCNCKQP 339
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA-----ERDTRLWTTMLNG 115
+ R VFD M R + +W+ MI GY++ EA +LF +M ++ +++L
Sbjct: 340 EKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPA 399
Query: 116 YIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIM 175
+ C D V W + YV+ N +
Sbjct: 400 CVRC------ESFLDKEGIHSCVVKWGFEKDKYVQ----------------------NAL 431
Query: 176 MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
M Y + G+IE A +F M +++VSWNT+I V CGR +DA + MQ
Sbjct: 432 MDMYSRMGRIEIARSIFGSMNR--KDIVSWNTMITGYVVCGRHDDALNLLHDMQ 483
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 79 DTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-------G 131
++ +N Y KCG I AR++FD++ RD W +M+N + A LF G
Sbjct: 124 NSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183
Query: 132 PDAEKSVST---WSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKA 188
P + VS S ++NG + Q+ + + + N ++ Y + G++ +A
Sbjct: 184 PTSFTLVSVAHACSNLINGLLLGKQVHA---FVLRNGDWRTFTNNALVTMYAKLGRVYEA 240
Query: 189 LDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
LF ++++VSWNTII +L + R E+A + + M
Sbjct: 241 KTLFDVF--DDKDLVSWNTIISSLSQNDRFEEALLYLHVM 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
QM +D + + +++ Y +CG + +R +F+ ++V TW+ ++ Y + EEA +
Sbjct: 538 QMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSV-RNVITWNVLIMAYGMHGKGEEALK 596
Query: 160 LFYEMPERKD---------VSWNIMMGGYGQNGQIEKALDLFRRMP-----EPERNVVSW 205
LF M E D V++ + +G +++ L+LF M EP + +
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSD--HY 654
Query: 206 NTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
++ L R G+IE+A M + V +W++++
Sbjct: 655 ACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT- 106
NSF++ K G D AR+VFD++ RD W++MIN + + A LF M +
Sbjct: 124 NSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183
Query: 107 ----------RLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEE 156
+ ++NG ++ + F + + T + +V Y K+ ++ E
Sbjct: 184 PTSFTLVSVAHACSNLINGL----LLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYE 239
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKA--- 211
A+ LF ++ VSWN ++ QN + E+AL M + N V+ +++ A
Sbjct: 240 AKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSH 299
Query: 212 --LVRCGR 217
++ CG+
Sbjct: 300 LEMLGCGK 307
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 50/239 (20%)
Query: 1 MAKKLPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRT 60
+AKK P+ IL ++++ +I Y +T LA N+ +S K
Sbjct: 14 LAKKSNPI--ILTQCNQIHAQLIITQY-ISQTHLA------------NTLLSFYSKSSNF 58
Query: 61 DHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR------------- 107
+A K+FD+MP R++ W T+I+ ++K G + +A ++F+ M D R
Sbjct: 59 HYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRAC 118
Query: 108 ----LWTTMLNGY---IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVK-INQIEEAER 159
LW+ L + + CG+ R+ F G S++V Y+K + + +A R
Sbjct: 119 TNRELWSVGLQIHGLLVRCGL---EREKFAG----------SSLVYMYLKGGDDLRDALR 165
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
+FY + ER V+WN+M+ G+ QNG LF M E E+ + +L++C +
Sbjct: 166 VFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWE-EQGLKPDRITFASLLKCCSV 223
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----DTRLWTTMLNGYI 117
A +VF + ERD+ W+ MI+G+ + G + ++LF +M E D + ++L
Sbjct: 163 ALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKC-- 220
Query: 118 ECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNI 174
C ++ E ++ AE V S MV+ Y K + ++F M ++ + W+
Sbjct: 221 -CSVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSS 279
Query: 175 MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
M+ GY N + E+A++ F+ M +R + + + L C IED
Sbjct: 280 MISGYTMNNRGEEAVNFFKDMCR-QRVKLDQHVLSSTLKACVEIED 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
V+ E D+ + M++ Y KC + RK+FD M ++D +W++M++GY +EA
Sbjct: 234 VYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEA 293
Query: 126 RKLFDGPDAEK---SVSTWSTMVNGYVKINQIE---EAERLFYEMPERKDV-SWNIMMGG 178
F ++ S+ + V+I + + L + + D ++++
Sbjct: 294 VNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNL 353
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVR----CGR 217
Y G++ LF R+ ++++V+WN++I A R CGR
Sbjct: 354 YASFGELGDVEKLFSRI--DDKDIVAWNSMILAQARPGQGCGR 394
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 55 CKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLN 114
CK+ D A K F + +D W ++I + M +A +L +M + + L
Sbjct: 460 CKQ--IDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLP 517
Query: 115 GYIE-CGM---IKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP 165
I C I E ++L G + V S++++ Y K IEE+E++F E
Sbjct: 518 LCISACSQLLTISEGKQLHVFAIKSGYSCD--VYIGSSIIDMYAKCGNIEESEKVFDEQL 575
Query: 166 ERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE--PERNVVSWNTIIKALVRCGRIEDAQW 223
+ +V++N ++ GY +G+ ++A+++ ++ + N V++ ++ A G +E+
Sbjct: 576 KPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSH 635
Query: 224 HFNQMQERER 233
F M ++ +
Sbjct: 636 LFTLMLDKYK 645
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 54/238 (22%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
++G+ HA V D+ + +++ Y+KCG +K ARK+F+Q+ D WTT+++G
Sbjct: 517 QQGKQIHA-VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 116 YIECGMIKEARKLFD---------GPDAEKSVSTW------------------------- 141
+E G +E + LF PD E + +T
Sbjct: 576 CVENG--EEEQALFTYHQMRLAGVQPD-EYTFATLVKACSLLTALEQGKQIHANIMKLNC 632
Query: 142 -------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+++V+ Y K IE+A LF M R WN M+ G Q+G E+AL+ F
Sbjct: 633 AFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE 692
Query: 195 MPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
M P+R V++ ++ A G DA +F+ MQ+ E ++ ++ +VD L
Sbjct: 693 MKSRGVTPDR--VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDAL 748
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 81/262 (30%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
+ I K G+ + A +F D+ W+ M++G+ +EA +LF M ER
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 105 ------------------------------------DTRLWTTMLNGYIECGMIKEARKL 128
D + + +L+ Y++CG +K ARK+
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------------------------ 164
F+ + V+ W+T+++G V+ + E+A +++M
Sbjct: 558 FNQIPSPDDVA-WTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616
Query: 165 -PERKDVSWNIM--------------MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
+ K + NIM + Y + G IE A LFRRM R+V WN +I
Sbjct: 617 LEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM--NTRSVALWNAMI 674
Query: 210 KALVRCGRIEDAQWHFNQMQER 231
L + G E+A FN+M+ R
Sbjct: 675 VGLAQHGNAEEALNFFNEMKSR 696
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 55/273 (20%)
Query: 20 THPLIHGYPFLR--TRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
TH H + LR L + +L+ K C + S E +A K+ Q D+ +
Sbjct: 103 THEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQW---DVFV 159
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG------ 131
++N Y K I+EAR LFD+M RD LW M+ Y+E G E LF
Sbjct: 160 AGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGL 219
Query: 132 -PDAEKSVSTWSTMVNGYVKINQIEE----AERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
PD + + V ++E+ A +LF + WN + Y Q G+
Sbjct: 220 RPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGW 279
Query: 187 KALDLFRRMPEP-------------------------------------ERNVVSWNTII 209
+A+D FR M + ++ V N+ I
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
V+ G + A+ F QM +E D+ SW T++
Sbjct: 340 NMYVKAGSVNYARRMFGQM--KEVDLISWNTVI 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS I+ K G ++AR++F QM E D+ W+T+I+G + G+ + + +LF +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 105 -DTRLWTTMLNGYIECGMIKEAR---------KLFDGPDAEKSVSTWSTMVNGYVKINQI 154
D T++L C ++E+ L G + VST +++ Y K ++
Sbjct: 396 PDQFTITSVLRA---CSSLEESYCVGRQVHTCALKAGIVLDSFVST--ALIDVYSKGGKM 450
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
EEAE LF+ SWN MM G+ + +AL LF M E
Sbjct: 451 EEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHE 493
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE--RDMRLWDTMINGYIKCGMIKEA 94
T LN + N+ I+ K G ARK+FD P+ RD+ ++ ++ Y G + +
Sbjct: 41 TSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDV 100
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST----------- 143
K + + ML + + L+ P A +++ ++
Sbjct: 101 EKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVA 160
Query: 144 --MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
+VN Y K +I EA LF MP R V WN+MM Y + G ++ L LF
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
S + K G + A +F +M R + LW+ MI G + G +EA F++M R
Sbjct: 640 TSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVT 699
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPD----AEKSVSTWSTMVNGYVKINQIEEAER 159
D + +L+ G+ +A K FD E + +S +V+ + I+EAE+
Sbjct: 700 PDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEK 759
Query: 160 LFYEMP 165
+ MP
Sbjct: 760 VVSSMP 765
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 102/287 (35%), Gaps = 93/287 (32%)
Query: 23 LIHGYPFLRTRL---ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWD 79
L++G P L A L ++ + ++ K R AR +FD+MP RD+ LW+
Sbjct: 133 LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWN 192
Query: 80 TMINGYIKCGMIKE-------------------------------------------ARK 96
M+ Y++ G E A K
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK 252
Query: 97 LFDQMAERDTRLWTTMLNGYIECG-----------MIK---------------------- 123
LF + D +W L+ Y++ G MIK
Sbjct: 253 LFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH 312
Query: 124 -EARKLFDGPDA----EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
E K G ++ VS ++ +N YVK + A R+F +M E +SWN ++ G
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Query: 179 YGQNGQIEKAL----DLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
++G E +L DL R P++ TI L C +E++
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQ-----FTITSVLRACSSLEES 414
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 104/251 (41%), Gaps = 44/251 (17%)
Query: 18 LNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
++ L HG L ++L T +L E N I K G + K FD +P + R
Sbjct: 22 VSAKSLKHGKA-LHSQLIKT-ALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKTTRT 79
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLF-------- 129
W+T+++ Y K G+ +A KLFD+M +R+ + ++++G KEA K F
Sbjct: 80 WNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVG 139
Query: 130 ----DGPDAEKSVSTWS----------------------------TMVNGYVKINQIEEA 157
D VS S +++ Y K + +
Sbjct: 140 GLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSS 199
Query: 158 ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGR 217
LF M E+ VSW M+ Y + +I+ A +F M P + VSW +I V+ GR
Sbjct: 200 FCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEM--PVKYTVSWAALISGFVKNGR 257
Query: 218 IEDAQWHFNQM 228
+A F+QM
Sbjct: 258 CYEALEVFHQM 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 44/242 (18%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKE 93
+A+ T + N+ I K G + + +F M E+D W +M+ Y + I +
Sbjct: 170 VATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDD 229
Query: 94 ARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG-------PDAEKSVS------- 139
A K+F++M + T W +++G+++ G EA ++F P A+ VS
Sbjct: 230 ACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACAS 289
Query: 140 ---------------------------TWSTMVNGYVKINQIEEAERLFYEMPERKD-VS 171
++ +++ Y K ++ AE LF M KD VS
Sbjct: 290 EALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVS 349
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQ 229
WN ++ G+ QNG+ E +L +F RM E E N V++ ++ A G + + M+
Sbjct: 350 WNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSME 409
Query: 230 ER 231
R
Sbjct: 410 RR 411
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 42 TEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKL 97
+++ C+S + LC+ G+ A F +M E + + T+IN K G + EA L
Sbjct: 348 SDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSLFKSGRVMEAFNL 407
Query: 98 FDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNGYVK 150
QM R D TT+++G + KEA ++F+ + + T+S +++GY K
Sbjct: 408 QSQMVVRGVSFDIVTCTTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYSALLDGYCK 467
Query: 151 INQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVS 204
+ ++E AE + +M + ++++ ++ GY + G + KA+D+ R M + N
Sbjct: 468 LGEMELAELVLQKMQKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNIMPNTFV 527
Query: 205 WNTIIKALVRCGRIEDAQWHFNQMQ 229
+ +I A R G+ + A ++ +++
Sbjct: 528 YAILIDAFFRAGKQDVANGYYKEIK 552
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 38/236 (16%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR----KLFD 99
N+ I C++G D + +M +R D + ++ GY + G ++ A L D
Sbjct: 160 NTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVMYNLVD 219
Query: 100 QMAERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEE 156
+D T+++GY ECG++ +A L + D E V T++T++ + K+ ++
Sbjct: 220 GGVTKDVIGLNTLIDGYCECGLMSQAMDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLKR 279
Query: 157 AERLFYEM-PERKD----------------------VSWNIMMGGYGQNGQIEKALDLFR 193
AE LF E+ +KD V++ ++ Y + +E++L L
Sbjct: 280 AESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYCKFVGVEESLSLSE 339
Query: 194 R--MPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS--SWTTIVDCL 245
+ M +VV+ ++I+ AL R G++ +A F +M E D + S+ TI++ L
Sbjct: 340 QMIMNGIMSDVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPNHVSYATIINSL 395
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N+ I+ LC+ G T A+ V D+M +R D ++ +I GY +++A K + QM
Sbjct: 773 NTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFV 832
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV---STWSTMVNGYVKINQIEE 156
+ + T+L G G++K K+ G V +T+ +V+GY ++ EE
Sbjct: 833 DGISPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEE 892
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPER 200
+ + + EM + V ++N+++ + + G++ KA +LF M R
Sbjct: 893 STKFYREMLTKGFVPTTGTYNVLINCFAKAGRMHKAGELFNEMRTKGR 940
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 95/192 (49%), Gaps = 21/192 (10%)
Query: 65 KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECG 120
K+ D + + +++T+I + GM ++A+ + D+M +R D + ++ GY
Sbjct: 759 KLIDMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMVKRGISADYVTYNALIRGYCTGS 818
Query: 121 MIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV----S 171
+++A K + DG +++T++T++ G ++ +++ M ER V +
Sbjct: 819 HVEKAFKTYLQMFVDG--ISPNITTYNTLLWGLSNAGLMKGTDKIVRGMKERGFVPNAAT 876
Query: 172 WNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQ 227
++I++ GYG+ G E++ +R M P ++N +I + GR+ A FN+
Sbjct: 877 YDILVSGYGRVGNKEESTKFYREMLTKGFVPTTG--TYNVLINCFAKAGRMHKAGELFNE 934
Query: 228 MQERERDVSSWT 239
M+ + R +S T
Sbjct: 935 MRTKGRIPNSST 946
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 55/235 (23%)
Query: 50 FISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAERD 105
++ L + GR D AR + M + D+ + ++I+GY K G A + +M E++
Sbjct: 566 LLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEKN 625
Query: 106 TRLWTTMLNGYIECGMIKEAR--------KLFDGPDAEKSVSTWSTMVNGYVKINQIEEA 157
TR N I+ G+++ + ++ + A V T++T++N Y IE+A
Sbjct: 626 TRFDVVACNTLIK-GLLRLGKYDPQNVCSRMIELGLAPNCV-TYNTIINSYCIKGNIEDA 683
Query: 158 ERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM------PEP--------- 198
+ EM V++NI++GG + G ++KA D+ M P P
Sbjct: 684 LGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVKA 743
Query: 199 ----------------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
+ + +NT+I L R G A+ ++M +R
Sbjct: 744 YSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMVKR 798
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 54/238 (22%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
++G+ HA V D+ + +++ Y+KCG +K ARK+F+Q+ D WTT+++G
Sbjct: 517 QQGKQIHA-VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 116 YIECGMIKEARKLFD---------GPDAEKSVSTW------------------------- 141
+E G +E + LF PD E + +T
Sbjct: 576 CVENG--EEEQALFTYHQMRLAGVQPD-EYTFATLVKACSLLTALEQGKQIHANIMKLNC 632
Query: 142 -------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+++V+ Y K IE+A LF M R WN M+ G Q+G E+AL+ F
Sbjct: 633 AFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE 692
Query: 195 MPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
M P+R V++ ++ A G DA +F+ MQ+ E ++ ++ +VD L
Sbjct: 693 MKSRGVTPDR--VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDAL 748
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 81/262 (30%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
+ I K G+ + A +F D+ W+ M++G+ +EA +LF M ER
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 105 ------------------------------------DTRLWTTMLNGYIECGMIKEARKL 128
D + + +L+ Y++CG +K ARK+
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------------------------ 164
F+ + V+ W+T+++G V+ + E+A +++M
Sbjct: 558 FNQIPSPDDVA-WTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616
Query: 165 -PERKDVSWNIM--------------MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
+ K + NIM + Y + G IE A LFRRM R+V WN +I
Sbjct: 617 LEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM--NTRSVALWNAMI 674
Query: 210 KALVRCGRIEDAQWHFNQMQER 231
L + G E+A FN+M+ R
Sbjct: 675 VGLAQHGNAEEALNFFNEMKSR 696
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 55/273 (20%)
Query: 20 THPLIHGYPFLR--TRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
TH H + LR L + +L+ K C + S E +A K+ Q D+ +
Sbjct: 103 THEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQW---DVFV 159
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG------ 131
++N Y K I+EAR LFD+M RD LW M+ Y+E G E LF
Sbjct: 160 AGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGL 219
Query: 132 -PDAEKSVSTWSTMVNGYVKINQIEE----AERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
PD + + V ++E+ A +LF + WN + Y Q G+
Sbjct: 220 RPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGW 279
Query: 187 KALDLFRRMPEP-------------------------------------ERNVVSWNTII 209
+A+D FR M + ++ V N+ I
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
V+ G + A+ F QM +E D+ SW T++
Sbjct: 340 NMYVKAGSVNYARRMFGQM--KEVDLISWNTVI 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS I+ K G ++AR++F QM E D+ W+T+I+G + G+ + + +LF +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 105 -DTRLWTTMLNGYIECGMIKEAR---------KLFDGPDAEKSVSTWSTMVNGYVKINQI 154
D T++L C ++E+ L G + VST +++ Y K ++
Sbjct: 396 PDQFTITSVLRA---CSSLEESYCVGRQVHTCALKAGIVLDSFVST--ALIDVYSKGGKM 450
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
EEAE LF+ SWN MM G+ + +AL LF M E
Sbjct: 451 EEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHE 493
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE--RDMRLWDTMINGYIKCGMIKEA 94
T LN + N+ I+ K G ARK+FD P+ RD+ ++ ++ Y G + +
Sbjct: 41 TSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDV 100
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST----------- 143
K + + ML + + L+ P A +++ ++
Sbjct: 101 EKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVA 160
Query: 144 --MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
+VN Y K +I EA LF MP R V WN+MM Y + G ++ L LF
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
S + K G + A +F +M R + LW+ MI G + G +EA F++M R
Sbjct: 640 TSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVT 699
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPD----AEKSVSTWSTMVNGYVKINQIEEAER 159
D + +L+ G+ +A K FD E + +S +V+ + I+EAE+
Sbjct: 700 PDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEK 759
Query: 160 LFYEMP 165
+ MP
Sbjct: 760 VVSSMP 765
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 102/287 (35%), Gaps = 93/287 (32%)
Query: 23 LIHGYPFLRTRL---ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWD 79
L++G P L A L ++ + ++ K R AR +FD+MP RD+ LW+
Sbjct: 133 LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWN 192
Query: 80 TMINGYIKCGMIKE-------------------------------------------ARK 96
M+ Y++ G E A K
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK 252
Query: 97 LFDQMAERDTRLWTTMLNGYIECG-----------MIK---------------------- 123
LF + D +W L+ Y++ G MIK
Sbjct: 253 LFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH 312
Query: 124 -EARKLFDGPDA----EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
E K G ++ VS ++ +N YVK + A R+F +M E +SWN ++ G
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Query: 179 YGQNGQIEKAL----DLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
++G E +L DL R P++ TI L C +E++
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQ-----FTITSVLRACSSLEES 414
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 54/238 (22%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNG 115
++G+ HA V D+ + +++ Y+KCG +K ARK+F+Q+ D WTT+++G
Sbjct: 517 QQGKQIHA-VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG 575
Query: 116 YIECGMIKEARKLFD---------GPDAEKSVSTW------------------------- 141
+E G +E + LF PD E + +T
Sbjct: 576 CVENG--EEEQALFTYHQMRLAGVQPD-EYTFATLVKACSLLTALEQGKQIHANIMKLNC 632
Query: 142 -------STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRR 194
+++V+ Y K IE+A LF M R WN M+ G Q+G E+AL+ F
Sbjct: 633 AFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE 692
Query: 195 MPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
M P+R V++ ++ A G DA +F+ MQ+ E ++ ++ +VD L
Sbjct: 693 MKSRGVTPDR--VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDAL 748
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 81/262 (30%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
+ I K G+ + A +F D+ W+ M++G+ +EA +LF M ER
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 105 ------------------------------------DTRLWTTMLNGYIECGMIKEARKL 128
D + + +L+ Y++CG +K ARK+
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 129 FDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM------------------------ 164
F+ + V+ W+T+++G V+ + E+A +++M
Sbjct: 558 FNQIPSPDDVA-WTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616
Query: 165 -PERKDVSWNIM--------------MGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
+ K + NIM + Y + G IE A LFRRM R+V WN +I
Sbjct: 617 LEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM--NTRSVALWNAMI 674
Query: 210 KALVRCGRIEDAQWHFNQMQER 231
L + G E+A FN+M+ R
Sbjct: 675 VGLAQHGNAEEALNFFNEMKSR 696
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 55/273 (20%)
Query: 20 THPLIHGYPFLR--TRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRL 77
TH H + LR L + +L+ K C + S E +A K+ Q D+ +
Sbjct: 103 THEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQW---DVFV 159
Query: 78 WDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG------ 131
++N Y K I+EAR LFD+M RD LW M+ Y+E G E LF
Sbjct: 160 AGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGL 219
Query: 132 -PDAEKSVSTWSTMVNGYVKINQIEE----AERLFYEMPERKDVSWNIMMGGYGQNGQIE 186
PD + + V ++E+ A +LF + WN + Y Q G+
Sbjct: 220 RPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGW 279
Query: 187 KALDLFRRMPEP-------------------------------------ERNVVSWNTII 209
+A+D FR M + ++ V N+ I
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339
Query: 210 KALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
V+ G + A+ F QM +E D+ SW T++
Sbjct: 340 NMYVKAGSVNYARRMFGQM--KEVDLISWNTVI 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
NS I+ K G ++AR++F QM E D+ W+T+I+G + G+ + + +LF +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 105 -DTRLWTTMLNGYIECGMIKEAR---------KLFDGPDAEKSVSTWSTMVNGYVKINQI 154
D T++L C ++E+ L G + VST +++ Y K ++
Sbjct: 396 PDQFTITSVLRA---CSSLEESYCVGRQVHTCALKAGIVLDSFVST--ALIDVYSKGGKM 450
Query: 155 EEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE 197
EEAE LF+ SWN MM G+ + +AL LF M E
Sbjct: 451 EEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHE 493
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE--RDMRLWDTMINGYIKCGMIKEA 94
T LN + N+ I+ K G ARK+FD P+ RD+ ++ ++ Y G + +
Sbjct: 41 TSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDV 100
Query: 95 RKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWST----------- 143
K + + ML + + L+ P A +++ ++
Sbjct: 101 EKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVA 160
Query: 144 --MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
+VN Y K +I EA LF MP R V WN+MM Y + G ++ L LF
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
S + K G + A +F +M R + LW+ MI G + G +EA F++M R
Sbjct: 640 TSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVT 699
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPD----AEKSVSTWSTMVNGYVKINQIEEAER 159
D + +L+ G+ +A K FD E + +S +V+ + I+EAE+
Sbjct: 700 PDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEK 759
Query: 160 LFYEMP 165
+ MP
Sbjct: 760 VVSSMP 765
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 102/287 (35%), Gaps = 93/287 (32%)
Query: 23 LIHGYPFLRTRL---ASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWD 79
L++G P L A L ++ + ++ K R AR +FD+MP RD+ LW+
Sbjct: 133 LLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWN 192
Query: 80 TMINGYIKCGMIKE-------------------------------------------ARK 96
M+ Y++ G E A K
Sbjct: 193 VMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK 252
Query: 97 LFDQMAERDTRLWTTMLNGYIECG-----------MIK---------------------- 123
LF + D +W L+ Y++ G MIK
Sbjct: 253 LFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNH 312
Query: 124 -EARKLFDGPDA----EKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGG 178
E K G ++ VS ++ +N YVK + A R+F +M E +SWN ++ G
Sbjct: 313 LELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISG 372
Query: 179 YGQNGQIEKAL----DLFRRMPEPERNVVSWNTIIKALVRCGRIEDA 221
++G E +L DL R P++ TI L C +E++
Sbjct: 373 CARSGLEECSLRLFIDLLRSGLLPDQ-----FTITSVLRACSSLEES 414
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF------DQM 101
N+F++ K + +RKVFD+M ERD+ W++M++GYI G + EA LF D +
Sbjct: 159 NAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGI 218
Query: 102 AERDTRLWTTMLNGY-----------IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVK 150
D T+L + I C ++K KL + ++ Y
Sbjct: 219 GFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKL--------DPAVGCGLITLYSN 270
Query: 151 INQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV--VSWNTI 208
I A+ +F ++P+R + W+ ++ YG +G ++AL +FR++ E ++ + + ++
Sbjct: 271 CGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSL 330
Query: 209 IKALVRCGRIEDAQWHFNQMQERERDV---SSWTTIVDCL 245
+ A G E+ WH Q E V + + +VD L
Sbjct: 331 LSACSHAGMHEEG-WHLFQTMETYGVVKGEAHYACMVDLL 369
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 33/156 (21%)
Query: 60 TDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM------------------ 101
+HARKVFD + ERD+ W+ +I GY G EA +++ M
Sbjct: 70 VEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKA 129
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
AERD + ++CG+ E + + V Y K +IE + +
Sbjct: 130 CGAERDCLKGRIIHGNVVKCGL-------------EFDLFVGNAFVAFYAKCKEIEASRK 176
Query: 160 LFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+F EM ER VSWN MM GY NG +++A+ LF M
Sbjct: 177 VFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDM 212
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 37 TFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQM-----PERDMRLWDTMINGYIKCGMI 91
+F + ++ N+ I C+ D AR +++ D+ + T+I+GY K +
Sbjct: 241 SFGCSPDVITYNTIIHGFCRISEVDRARSFLNEVCLNGQVAPDVVSYTTIISGYCKLSRM 300
Query: 92 KEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEA-----RKLFDGPDAEKSVSTWS 142
KEA LFD+M T + +++G+++ G + + + LF G + + V T++
Sbjct: 301 KEASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFRGCNPD--VVTFT 358
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPE- 197
+++NGY + Q++ A ++ EM RK ++++++ G+ +N ++ +A D+ R+ +
Sbjct: 359 SLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEARDILTRLKQS 418
Query: 198 ---PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
P+ V +N +I + G +++A +M+E
Sbjct: 419 DVVPQSFV--YNPVIDGYCKSGNVDEANKILAEMEE 452
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 94/197 (47%), Gaps = 25/197 (12%)
Query: 23 LIHGYPFLRTRLASTFSLNTEMKRC---------NSFISRLCKEGRTDHARKVFDQMPER 73
+I GY L +R+ SL EM R N+ I K G + ++ +M R
Sbjct: 290 IISGYCKL-SRMKEASSLFDEMIRSGTMPNAFTFNALIDGFVKLGDMASSLAMYHKMLFR 348
Query: 74 ----DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMIKEA 125
D+ + ++INGY G +K A +++++M R ++ ++NG+ + + EA
Sbjct: 349 GCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAASLYTFSVLVNGFCKNNRLHEA 408
Query: 126 RKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSWNIMMGG 178
R + D ++ +++GY K ++EA ++ EM E + +++ I++ G
Sbjct: 409 RDILTRLKQSDVVPQSFVYNPVIDGYCKSGNVDEANKILAEMEENRCKPDKLTYTILIIG 468
Query: 179 YGQNGQIEKALDLFRRM 195
+ G++ +A+ +F +M
Sbjct: 469 HCSKGRMAEAIGIFDKM 485
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFY 162
+ D T +L+ Y + G +K AR +FD K ++TW+ M+ G + +E A LF+
Sbjct: 111 KHDVFASTALLDMYAKLGCLKFARNVFDEMSV-KELATWNAMMAGCTRFGDMERALELFW 169
Query: 163 EMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNV----VSWNTIIKALVRCGRI 218
MP R VSW M+ GY QN Q EKAL LF RM E E++V V+ +++ A G +
Sbjct: 170 LMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRM-EREKDVSPNEVTLASVLPACANLGAL 228
Query: 219 EDAQ 222
E Q
Sbjct: 229 EIGQ 232
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 49 SFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL 108
+ + K G AR VFD+M +++ W+ M+ G + G ++ A +LF M R+
Sbjct: 119 ALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVS 178
Query: 109 WTTMLNGYIECGMIKEARKLFDGPDAEKSVS----TWSTMVNGYVKINQIEEAERLFYEM 164
WTTM++GY++ ++A LF + EK VS T ++++ + +E +R+ E+
Sbjct: 179 WTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRV--EV 236
Query: 165 PERKDVSW------NIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRI 218
RK+ + N ++ Y + G+I+ A +F + RN+ SWN++I L G+
Sbjct: 237 YARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRF-RNLCSWNSMIMGLAVHGQC 295
Query: 219 EDAQWHFNQMQERERDVSSWTTIVDCL 245
A ++QM RE + T V L
Sbjct: 296 HKAIQLYDQML-REGTLPDDVTFVGLL 321
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 142 STMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERN 201
+ +++ Y K+ ++ A +F EM ++ +WN MM G + G +E+AL+LF MP RN
Sbjct: 118 TALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPS--RN 175
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVS 236
VVSW T++ ++ + E A F +M ERE+DVS
Sbjct: 176 VVSWTTMVSGYLQNKQYEKALGLFMRM-EREKDVS 209
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMA 102
E+ N+ ++ + G + A ++F MP R++ W TM++GY++ ++A LF +M
Sbjct: 144 ELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRME 203
Query: 103 -ERDTRLWTTMLN---------GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKIN 152
E+D L G +E G E +G K++ + ++ Y K
Sbjct: 204 REKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNG--FFKNLFVCNAVLEMYAKCG 261
Query: 153 QIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKA 211
+I+ A ++F E+ +++ SWN M+ G +GQ KA+ L+ +M E + T +
Sbjct: 262 KIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLR-EGTLPDDVTFVGL 320
Query: 212 LVRC---GRIEDAQWHFNQM 228
L+ C G +E + F M
Sbjct: 321 LLACTHGGMVEKGKHVFQSM 340
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 40 LNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEAR 95
+NT + N+ I LCK+ A ++ +M + D+ + ++I G+ G K+A
Sbjct: 130 INTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAF 189
Query: 96 KLFDQMA----ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGY 148
+LF +M RD + +++ + G +K A+ L E V T+ ++++GY
Sbjct: 190 RLFHEMVLKNINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGY 249
Query: 149 VKINQIEEAERLF---YEMPERKDV-SWNIMMGGYGQNGQIEKALDLF----RRMPEPER 200
+N++ +A+ +F +M D +++IM+ G+ + +++AL LF RR P
Sbjct: 250 CLVNEVNKAKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAP-- 307
Query: 201 NVVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIVDCL 245
N V++N++I L + GRI A + M + D+ ++ +++D L
Sbjct: 308 NTVTYNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFTYNSLIDAL 354
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N ++ N + LCKEG A+ + M + D+ + ++++GY + +A
Sbjct: 199 NINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKA 258
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGP---DAEKSVSTWSTMVNG 147
+ +F+ +++ D ++ M+NG+ + M+ EA LFD + T++++++G
Sbjct: 259 KHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDG 318
Query: 148 YVKINQIEEAERLFYEM---PERKDV-SWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV 203
K +I A L M + D+ ++N ++ +N I++ + + ++
Sbjct: 319 LCKSGRIPYAWELVDTMHNNGQPADIFTYNSLIDALCKNHHIDQGI---------QPDMY 369
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQERE 232
++N +I L + GR+++AQ F + +E
Sbjct: 370 TYNILIDGLCKGGRLKNAQDIFQDLLIKE 398
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 40/200 (20%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGY 116
GR HA V E D+ + + +I+ Y KCG I A +F+++ R + W +ML
Sbjct: 228 GRQLHAFIVRCGYKE-DVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAAL 286
Query: 117 IE-------CGMIKEARKLFDGPD------------------------------AEKSVS 139
++ C + +ARK + D E ++
Sbjct: 287 VQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIF 346
Query: 140 TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
S +V+ Y K IE AE++F E+PER V+WN M+GGY G I+ AL LF M
Sbjct: 347 VGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS 406
Query: 200 RNV-VSWNTIIKALVRCGRI 218
+ S+ T+I L C R+
Sbjct: 407 HGIRPSYVTLISILSVCSRV 426
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 47/240 (19%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIK----CGMIKEARKLFDQMA 102
C+ F CK G A +FD+MP+R++ W+ I+ ++ I ++
Sbjct: 147 CSCF-DMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHG 205
Query: 103 ERDTRLWTTMLNGYIECGMIKEARKLFDG---PDAEKSVSTWSTMVNGYVKINQIEEAER 159
E ++ + LN ++ + R+L ++ VS + +++ Y K I AE
Sbjct: 206 EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEM 265
Query: 160 LFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLF---RRMPEP----------------- 198
+F + RK+ VSW M+ QN + E+A +F R+ EP
Sbjct: 266 VFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGG 325
Query: 199 ----------------ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
E N+ + ++ +CG IE+A+ F+++ ER++ +W ++
Sbjct: 326 LELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP--ERNLVTWNAMI 383
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 58/250 (23%)
Query: 43 EMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM- 101
+K N +S K G A VF +MPER++ W+ ++ GY K G EA L+D+M
Sbjct: 133 SVKLGNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRML 192
Query: 102 ---AERDTRLWTTMLNGYIECGMIKEARKLFDGPDA---------EKSVSTWSTMVNGYV 149
D + +L CG + + L G + E V + ++ Y
Sbjct: 193 WVGVRPDVYTFPCVLR---TCGGVPD---LVKGREIHVHVLRFGFESDVDVINALITMYA 246
Query: 150 KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PE------ 199
K I+ A +F +MP++ +SWN M+ G +NG+ + L LF RM E P+
Sbjct: 247 KCGDIDTARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTS 306
Query: 200 ---------------------------RNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
R+ +N++I+ G +E+A+ F+Q +
Sbjct: 307 VITACELIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTE--C 364
Query: 233 RDVSSWTTIV 242
RDV WT ++
Sbjct: 365 RDVVMWTAMI 374
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 72 ERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDG 131
RD +++++I Y G+++EA K+F Q RD +WT M++GY M ++A + +
Sbjct: 333 SRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKM 392
Query: 132 PDAEKSV----------STWSTMVNGYVKINQIEEAER---LFYEMPERKDVSWNIMMGG 178
+AE + S S + + +N E+A++ +FY + K ++
Sbjct: 393 MEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANK------LIDM 446
Query: 179 YGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSW 238
Y + I+KAL++F + ++N++SW +II L R DA + F +M R++ +W
Sbjct: 447 YAKCKCIDKALEVFHSI--RDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQK--PNW 502
Query: 239 TTIVDCL 245
T+V L
Sbjct: 503 VTLVCVL 509
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N I K D A +VF + ++++ W ++I G +A F +M R
Sbjct: 441 NKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQKP 500
Query: 108 LWTTMLN--------GYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAER 159
W T++ G CG A L G + + + +++ YV+ ++E A +
Sbjct: 501 NWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMP--NAVLDMYVRCGRMEYAWK 558
Query: 160 LFYEMPERKDVS-WNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIKALVRCG 216
F+ + + DVS WNI++ GY + G+ A +LFRRM E N V++ +I+ A R G
Sbjct: 559 QFFSIDQ--DVSTWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRSG 616
Query: 217 RIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+ + +++ M+ + + ++ + +VD L
Sbjct: 617 MVAEGLEYYDSMKYKYSIKPNLKHYACVVDLL 648
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 61/229 (26%)
Query: 51 ISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWT 110
I +LC G D A + M E + + + ++ K ARK +R+W+
Sbjct: 69 ICQLCLVGNLDSAMSYLESMHELKISVEEDSYIALVRLCEWKRARK-------EGSRVWS 121
Query: 111 TMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
I +++ + SV + +++ +VK + +A +F MPER
Sbjct: 122 ----------YITKSKMM-----THLSVKLGNVLLSMFVKFGNLVDAWYVFGRMPERNLF 166
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRM------PEP-------------------------- 198
SWN+++GGY + G ++AL+L+ RM P+
Sbjct: 167 SWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHV 226
Query: 199 -----ERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
E +V N +I +CG I+ A+ F++M +++R SW ++
Sbjct: 227 LRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDR--ISWNAMI 273
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 115/223 (51%), Gaps = 19/223 (8%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEA 94
++N + N + CKE R A+ V M ++ D+ ++++++ Y + +A
Sbjct: 277 NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKA 336
Query: 95 RKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNG 147
+ +F+ +++R + ++ M++G+ + + EA LF V T++++++G
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDG 396
Query: 148 YVKINQIEEAERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERN 201
K+ +I A +L EM +R +++N ++ +N Q++KA+ L +M + + +
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456
Query: 202 VVSWNTIIKALVRCGRIEDAQWHFNQMQERER--DVSSWTTIV 242
+ ++ T++ L + GR+EDA+ F + + DV+ +T ++
Sbjct: 457 ICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 115/217 (52%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQM-- 101
N+ I +CK + A ++ +M + D+ ++ +I+G+ G +K+A LF++M
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275
Query: 102 --AERDTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + +++G+ + +KEA+ + + V T++++++ Y + ++ +
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIK 210
A+ +F + +R S++IM+ G+ + ++++A++LF+ M +VV++N++I
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395
Query: 211 ALVRCGRIEDAQWHFNQMQER--ERDVSSWTTIVDCL 245
L + G+I A ++M +R D ++ +I+D L
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDAL 432
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 51 ISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAER-- 104
I CK + D A +F +M D+ ++++I+G K G I A KL D+M +R
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 105 --DTRLWTTMLNGYIECGMIKEARKLFDGPDAE---KSVSTWSTMVNGYVKINQIEEAER 159
D + ++L+ + + +A L E + T++T+V+G K ++E+A
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478
Query: 160 LFYEMPERK---DVS-WNIMMGGYGQNGQIEKALDLFRRMPEPE--RNVVSWNTIIKAL 212
+F ++ + DV+ + M+ G+ +G +++LDL +M E N V++ II +L
Sbjct: 479 VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSL 537
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 15/163 (9%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I LCK G+ +A K+ D+M +R D ++++++ K + +A L +M +
Sbjct: 391 NSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 450
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK---SVSTWSTMVNGYVKINQIEE 156
D +TT+++G + G +++AR +F+ + V+ ++ M+ G+ +E
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510
Query: 157 AERLFYEMPER----KDVSWNIMMGGYGQNGQIEKALDLFRRM 195
+ L +M E V++ I++ + +KA L R M
Sbjct: 511 SLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 19/217 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
N ++ LCK+G+ D+ +M E+ D+ ++T++N Y + G++ EA L D MA
Sbjct: 242 NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAG 301
Query: 104 RDTR----LWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ + + ++NG + G + A+++ D G + +T++ M+ + + E
Sbjct: 302 KGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWE 361
Query: 157 AERLFYEMPERKDV----SWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
AER+F EM +R V S++ ++G + +NG++ +AL F +M + V + +I
Sbjct: 362 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 421
Query: 211 ALVRCGRIEDAQWHFNQMQERE--RDVSSWTTIVDCL 245
R + A N+M ER DV ++ T+++ L
Sbjct: 422 GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGL 458
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 118/236 (50%), Gaps = 29/236 (12%)
Query: 23 LIHGY--PFLRTRLASTF------SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERD 74
LIHGY T+ S F SL ++ N+ + CK G + A++++ M R+
Sbjct: 489 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 548
Query: 75 MR----LWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWTTMLNGYIECGMIKEAR 126
+ + +ING+ G++ EA +L+D+M E+ + T++ GY+ G + +A
Sbjct: 549 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 608
Query: 127 KLFDGPDAE---KSVSTWSTMVNGYVKINQIEEAERLFYEMPER----KDVSWNIMMGGY 179
+ +E T++T++N +VK + A L M ER V++N ++GG+
Sbjct: 609 DFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGF 668
Query: 180 GQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQER 231
++G++++A + +M + P+++ ++ ++I V +++A ++M +R
Sbjct: 669 SRHGRMQEAEMVLHKMIDKGINPDKS--TYTSLINGYVSKDNMKEAFRVHDEMLQR 722
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 52/237 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQM---------------------------PER------- 73
N+ I+ LCKEG + A++V D+M ER
Sbjct: 312 NALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ 371
Query: 74 -----DMRLWDTMINGYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKE 124
D+ + +++ + + G + A F++M DT ++T ++NGY +
Sbjct: 372 RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSG 431
Query: 125 ARKLFDGP---DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV----SWNIMMG 177
A K+ + V T++T++NG + +++A+ LF EM ER + ++
Sbjct: 432 ALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIH 491
Query: 178 GYGQNGQIEKALDLFRRMP--EPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
GY ++G + KAL LF M + +VV++NT++ + G +E A+ + M RE
Sbjct: 492 GYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 548
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L++ + C+S L +GR H+ V ER++ + T+I+ Y K G I EA+ +
Sbjct: 251 TLSSILSACSSLAMLL--QGRQVHSL-VIKMGSERNVYVASTLIDMYSKGGDIDEAQCVL 307
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQI 154
DQ ++++T LWT+M+ GY +CG EA +LFD +K + ++ ++ I
Sbjct: 308 DQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFI 367
Query: 155 EEAERLFYEMPERKDVSWNI-----MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++ E F +M +S +I ++ Y +NG + KA DL MP + N + W++ +
Sbjct: 368 DKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPY-DPNCIIWSSFL 426
Query: 210 KALVRCGRIE 219
A G +E
Sbjct: 427 SACKIYGDVE 436
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 51/243 (20%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
C++ + K A K+F M + D W ++I G+ ++A LF +M
Sbjct: 84 CSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQI 143
Query: 107 R----LWTTMLNGYI-ECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEE 156
R T+++N + + G+++ L G D V S++V+ Y QI++
Sbjct: 144 RPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFV--ISSLVDCYANWGQIDD 201
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE------------------- 197
A LF E E+ V +N M+ GY QN E AL LF M E
Sbjct: 202 AVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSS 261
Query: 198 ------------------PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
ERNV +T+I + G I++AQ +Q ++ + WT
Sbjct: 262 LAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVL--WT 319
Query: 240 TIV 242
+++
Sbjct: 320 SMI 322
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 39 SLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLF 98
+L++ + C+S L +GR H+ V ER++ + T+I+ Y K G I EA+ +
Sbjct: 251 TLSSILSACSSLAMLL--QGRQVHSL-VIKMGSERNVYVASTLIDMYSKGGDIDEAQCVL 307
Query: 99 DQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV----STWSTMVNGYVKINQI 154
DQ ++++T LWT+M+ GY +CG EA +LFD +K + ++ ++ I
Sbjct: 308 DQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFI 367
Query: 155 EEAERLFYEMPERKDVSWNI-----MMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTII 209
++ E F +M +S +I ++ Y +NG + KA DL MP + N + W++ +
Sbjct: 368 DKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPY-DPNCIIWSSFL 426
Query: 210 KALVRCGRIE 219
A G +E
Sbjct: 427 SACKIYGDVE 436
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 51/243 (20%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
C++ + K A K+F M + D W ++I G+ ++A LF +M
Sbjct: 84 CSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQI 143
Query: 107 R----LWTTMLNGYI-ECGMIKEARKLF-----DGPDAEKSVSTWSTMVNGYVKINQIEE 156
R T+++N + + G+++ L G D V S++V+ Y QI++
Sbjct: 144 RPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFV--ISSLVDCYANWGQIDD 201
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE------------------- 197
A LF E E+ V +N M+ GY QN E AL LF M E
Sbjct: 202 AVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSS 261
Query: 198 ------------------PERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWT 239
ERNV +T+I + G I++AQ +Q ++ + WT
Sbjct: 262 LAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVL--WT 319
Query: 240 TIV 242
+++
Sbjct: 320 SMI 322
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 83/250 (33%)
Query: 58 GRTDHARKVFDQMPERDMRL--WDTMINGYIKCGMIKEARKLFDQMAER----------- 104
G D A +FDQM +RDM W+++I+GY + G+ +A L+ QM E
Sbjct: 160 GYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPR 219
Query: 105 ----------------------------DTRLWTTMLNGYIECGMIKEARKLFDGPDAEK 136
D + +++ Y +CG I +ARK+F+
Sbjct: 220 VLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRD 279
Query: 137 SVSTWSTMVNGYVKINQIEEAERLFYEM------PE------------------------ 166
SVS W++M+ GYV+ EA +F +M P+
Sbjct: 280 SVS-WNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSSLDVGVQIHGWV 338
Query: 167 -RKDVSWNIMMG-----GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIED 220
R+ V WN+ + Y ++G+++KA +F M PER+VVSWN+II + C E
Sbjct: 339 IRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLM--PERDVVSWNSIISS--HCKHPE- 393
Query: 221 AQWHFNQMQE 230
A +F +M+E
Sbjct: 394 AISYFEKMEE 403
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER--- 104
N+ + K G ARK+F++M RD W++M+ GY++ G+ EA +F QM +
Sbjct: 253 NALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEK 312
Query: 105 -DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYE 163
D + +L + + E ++S ++++ Y K ++++A +F
Sbjct: 313 PDYFSISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNL 372
Query: 164 MPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPE----PERNVVSWNTIIKALVRCGRIE 219
MPER VSWN ++ + ++ + A+ F +M E P++ +++ +++ A G +
Sbjct: 373 MPERDVVSWNSIISSHCKHPE---AISYFEKMEEAGEVPDK--ITFVSLLSACAHLGLVN 427
Query: 220 DAQWHFNQMQERER 233
D + F M E+ +
Sbjct: 428 DGERLFALMCEKYK 441
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 76/253 (30%)
Query: 64 RKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL--WTTMLNGYIECGM 121
R + + R++ + ++ Y G + +A LFDQM +RD W ++++GY E G+
Sbjct: 135 RLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGL 194
Query: 122 IKEARKLF-----------------------------DGPDAEKSVS---------TWST 143
+A L+ G + + V +
Sbjct: 195 YDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNA 254
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEPE 199
+V+ Y K I +A ++F +M R VSWN M+ GY ++G +A+++FR+M +P+
Sbjct: 255 LVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPD 314
Query: 200 -------------------------RNVVSW-----NTIIKALVRCGRIEDAQWHFNQMQ 229
R V W N++I A + GR++ A+ FN M
Sbjct: 315 YFSISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMP 374
Query: 230 ERERDVSSWTTIV 242
ERDV SW +I+
Sbjct: 375 --ERDVVSWNSII 385
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
V Q E ++ + +++I Y K G + +AR +F+ M ERD W ++++ + + EA
Sbjct: 338 VIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHCKH---PEA 394
Query: 126 RKLFDGPDAEKSVS---TWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMG 177
F+ + V T+ ++++ + + + ERLF M E+ + + M+
Sbjct: 395 ISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEHYGCMVN 454
Query: 178 GYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERD 234
YG+ G +EKA + RM W ++ A + G + + N++ E E D
Sbjct: 455 LYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYACLLHGNVTIGEISANKLFELEPD 511
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 56 KEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR----LWT- 110
K+G+ AR VF+ +PERD+ +I+GY + G+ +EA +LF ++ + +T
Sbjct: 4 KDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTG 63
Query: 111 --TMLNGYIECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
T L+G + K+ + V +++++ Y K + + R+F M ER
Sbjct: 64 VLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERT 123
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRC--GRIEDAQWH-F 225
+SWN M+ GY ++G+ + L LF M E + TI+ L C G +ED + F
Sbjct: 124 VISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIF 183
Query: 226 NQMQ----ERERDVSSWTTIVDCL 245
N M E E + + +VD L
Sbjct: 184 NDMSSGKIEVEPKMEHYGCVVDLL 207
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYI 117
G+ H + ++P + L +++I+ Y KCG + +R++FD M ER W ML GY
Sbjct: 77 GKQVHNHVLRSEIPSF-VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYS 135
Query: 118 ECGMIKEARKLFD--------GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMP---- 165
+ G +E KLF PD+ ++ S +G ++ ++ +F +M
Sbjct: 136 KHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLE----DKGLNIFNDMSSGKI 191
Query: 166 --ERKDVSWNIMMGGYGQNGQIEKALDLFRRMP-EPERNVVSWNTIIKALVRCGRIEDAQ 222
E K + ++ G++G++E+A + ++MP EP + W +++ A ++ +
Sbjct: 192 EVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAI--WGSLLGACRVHSNVDIGE 249
Query: 223 WHFNQMQERE 232
+ Q+ E E
Sbjct: 250 FAGQQLLEIE 259
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 49 SFISRLCKEGRTDHARKVFDQMP--ERDMRLWDTMINGYIKCGMIKEARKLFDQM-AERD 105
S + K G + A KVFD+MP +R+ +W++MI GY++ GM EA LF++M E
Sbjct: 249 SLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGG 308
Query: 106 TRLWTTMLNGYIE-CGMI------KEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAE 158
L+G+ C + K+ L E + S+++N Y K+ IEE E
Sbjct: 309 VEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVE 368
Query: 159 RLFYEMPERKD-VSWNIMMGGYGQNGQIEKALDLFRRMPEPE 199
+F M KD V+WN+M+ Y Q G EKAL++ M E E
Sbjct: 369 LVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEE 410
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 52/257 (20%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPE-RDMRLWDTMINGYIKCGMIKEARK 96
F LN + +S ++ K G + VF M +D W+ MI+ Y++ GM ++A +
Sbjct: 344 FELNYVLG--SSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALE 401
Query: 97 LFDQMAE---------------------RDTRL-------------------WTTMLNGY 116
+ M E RD +L + +L+ Y
Sbjct: 402 MCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMY 461
Query: 117 IECGMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK----DVSW 172
+CG++ AR +F +K + W+TM+ + EA +LF++M VSW
Sbjct: 462 AKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSW 521
Query: 173 NIMMGGYGQNGQIEKALDLFRRM--PEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQE 230
N ++ G+ +NGQ+ +A D+F M N+++W T+I L + G +A F QMQ
Sbjct: 522 NSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQG 581
Query: 231 ---RERDVSSWTTIVDC 244
R +S + + C
Sbjct: 582 AGMRPNSISITSALSAC 598
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 80 TMINGYIKCGMIKEARKLFDQMA--ERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKS 137
++++ Y KCG++++A K+FD+M +R+ +W +M+ GY++ GM EA LF+ E
Sbjct: 249 SLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGG 308
Query: 138 VSTWSTMVNGY----VKINQIEEAER---LFYEMP-ERKDVSWNIMMGGYGQNGQIEKAL 189
V ++G+ + +EE ++ L M E V + +M Y + G IE+
Sbjct: 309 VEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVE 368
Query: 190 DLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERE 232
+FR M ++ V+WN +I + V+ G E A + M+E E
Sbjct: 369 LVFRSM-AVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEE 410
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 120 GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK--DVSWNIMMG 177
G + + FDG V +++V+ Y K +E+AE++F EMP RK DV WN M+
Sbjct: 231 GFVVKMGNEFDG-----CVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIV 285
Query: 178 GYGQNGQIEKALDLFRRM 195
GY QNG +A+ LF +M
Sbjct: 286 GYVQNGMNVEAVGLFEKM 303
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 57/239 (23%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMI 122
A KVFD+M ER++ ++ +++GY++ G +++ +FD+M +RD W +++G + G
Sbjct: 155 AHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFF 214
Query: 123 KEARKLF-----------------DGPDAEKSVSTWSTM-----------VNGYV----- 149
E +LF + P+ V S ++GYV
Sbjct: 215 SEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGF 274
Query: 150 ---------------KINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDLFR 193
K +E A ++F EM +RK + SWN M+ Y +G+ E A+ F
Sbjct: 275 VVDSFVSNALVDMYGKCGSLELARKVF-EMDQRKGLTSWNSMINCYALHGKCEDAITFFE 333
Query: 194 RMPEPERNV----VSWNTIIKALVRCGRIEDAQWHFNQMQER---ERDVSSWTTIVDCL 245
+M E V V++ ++ A G +E +F M + E ++ + ++D L
Sbjct: 334 KMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLL 392
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 91/182 (50%), Gaps = 20/182 (10%)
Query: 80 TMINGYIKC-GMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSV 138
++++ Y K G +++A K+FD+M+ER+ ++T +++GY+ G +++ +FD ++ V
Sbjct: 140 SLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFD-EMVDRDV 198
Query: 139 STWSTMVNGYVKINQIEEAERLFYEM----------------PERKDVSWNIMMGGYGQN 182
W+ +++G + E RLF EM P + V + G+G
Sbjct: 199 PAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGM 258
Query: 183 GQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
Q+ K + + + N ++ +CG +E A+ F +M +R + ++SW +++
Sbjct: 259 LQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVF-EMDQR-KGLTSWNSMI 316
Query: 243 DC 244
+C
Sbjct: 317 NC 318
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 110 TTMLNGYIEC-GMIKEARKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
T++++ Y + G +++A K+FD +E+++ ++ +V+GY+++ +E+ +F EM +R
Sbjct: 139 TSLVDSYSKVLGGLRDAHKVFD-EMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRD 197
Query: 169 DVSWNIMMGGYGQNGQIEKALDLFRRM 195
+WN ++ G QNG + + LFR M
Sbjct: 198 VPAWNAVISGCTQNGFFSEGIRLFREM 224
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 77/270 (28%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N ++ K G ++A K+FD+MP R+ + MI Y++ G I+ A+ LFD+M ER+
Sbjct: 111 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVA 170
Query: 108 LWTTMLNGYIECGMIKEA-----------------------------RKLFDGPDAEKSV 138
W M+ G ++ G+ +EA R LF G V
Sbjct: 171 TWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYV 230
Query: 139 S---------TWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKAL 189
+ ++ + Y+K + ER+ MP V+WN +M G QN E L
Sbjct: 231 AKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVL 290
Query: 190 DLFRRMP----EPER----NVVSWNT--------------IIKA---------------L 212
D + M P++ +V+S + +IKA
Sbjct: 291 DHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMY 350
Query: 213 VRCGRIEDAQWHFNQMQERERDVSSWTTIV 242
+CG ++D+ F ++ ERDV W++++
Sbjct: 351 SKCGSLQDSIKAF--LECEERDVVIWSSMI 378
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 89 GMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWST 143
G IK+A + F + RL++ ++ I + ++L G ++K +S +
Sbjct: 55 GHIKKAFESFLCDIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFIS--NH 112
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV 203
++N Y K ++ A +LF MP R +S NIM+ Y + G IE A +LF M E RNV
Sbjct: 113 LLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTE--RNVA 170
Query: 204 SWNTIIKALVRCGRIEDAQWHFNQMQ 229
+WN ++ LV+ G E+A F++M
Sbjct: 171 TWNAMVTGLVKFGLNEEALLLFSRMN 196
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
+F D + + ++N Y K G + A KLFD+M R+ M+ Y+E G I+ A
Sbjct: 98 IFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENA 157
Query: 126 RKLFDGPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEM 164
+ LFD E++V+TW+ MV G VK EEA LF M
Sbjct: 158 KNLFD-EMTERNVATWNAMVTGLVKFGLNEEALLLFSRM 195
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 54/246 (21%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTR 107
N ++ K G ++A K+FD+MP R+ + MI Y++ G I+ A+ LFD+M ER+
Sbjct: 117 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVA 176
Query: 108 LWTTMLNGYIECGMIKEARKLFDGPDAEKSVS---TWSTMVNGYVKINQIE--------- 155
W M+ G ++ G+ +EA LF + V ++ +++ G + +
Sbjct: 177 TWNAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFTLML 235
Query: 156 --EAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMP----EPER--------- 200
ER+ MP V+WN +M G QN + LD + M P+R
Sbjct: 236 RNVGERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISS 295
Query: 201 --------------------NVVSWNTIIKALV----RCGRIEDAQWHFNQMQERERDVS 236
S T+I +LV +CG ++D+ F ++ ERDV
Sbjct: 296 CSELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAF--LECEERDVV 353
Query: 237 SWTTIV 242
W++++
Sbjct: 354 LWSSMI 359
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 89 GMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD-----GPDAEKSVSTWST 143
G IK+A + F + RL++ ++ I + ++L G ++K +S +
Sbjct: 61 GHIKKAFESFLYGIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFIS--NH 118
Query: 144 MVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVV 203
++N Y K ++ A +LF MP R +S NIM+ Y + G IE A +LF M ERNV
Sbjct: 119 LLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEM--TERNVA 176
Query: 204 SWNTIIKALVRCGRIEDA 221
+WN ++ LV+ G E+A
Sbjct: 177 TWNAMVTGLVKFGLNEEA 194
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 26/202 (12%)
Query: 63 ARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAER-----------DTRLWTT 111
++ MP ++ W+T++ G K + FD + + D + +
Sbjct: 239 GERIIKWMPNCNLVAWNTLMAG-------KAQNRCFDGVLDHYCMMKMAGYRPDRITFVS 291
Query: 112 MLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERK 168
+++ E + + +++ A V+ S++V+ Y K ++++ + F E ER
Sbjct: 292 VISSCSELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERD 351
Query: 169 DVSWNIMMGGYGQNGQIEKALDLF--RRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFN 226
V W+ M+ YG +GQ EKA+ LF + N V++ +++ A G + F+
Sbjct: 352 VVLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFD 411
Query: 227 QMQER---ERDVSSWTTIVDCL 245
M E+ + + +T +VD L
Sbjct: 412 MMVEKYGLKARLEHYTCVVDLL 433
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+HG+ L+T++ S + N+ I+ K G + A KVFD+MP+R++ W++++
Sbjct: 218 VHGFA-LKTKVLSDVFVG------NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMY 270
Query: 84 GYIKCGMIKEARKLFDQMAERDTRLW---TTMLN--------GYIECGMIKEARKLFDGP 132
++ G+ +E+ LF + D L TM+ G + GM+ L G
Sbjct: 271 ACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGL 330
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLF 192
E V+ S++++ Y K + EA R+ ++ E+ +SWN M+GGY ++ A +L
Sbjct: 331 CGELKVN--SSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELL 387
Query: 193 RRMPEPERNVVSWNTIIKALVRC 215
R+M ++ V+ T++ L C
Sbjct: 388 RKMQMEDKVKVNEVTLLNVLPVC 410
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDT 106
C S +S + G+ A+ FD M E+++ W+TMING+ + +A +F QM +
Sbjct: 540 CISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS--S 597
Query: 107 RLWTTMLNGYIECGMIKEARKLFDGPD----------AEKSVSTWSTMVNGYVKINQIEE 156
++W ++ G + L G + E S T S +++ Y K +E+
Sbjct: 598 KIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCS-LIDMYAKCGCMEQ 656
Query: 157 AERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIKALVR 214
++ +F + + +V+WN+++ GYG +G KA++LF+ M + V++ ++ A
Sbjct: 657 SQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNH 716
Query: 215 CGRIEDAQWHFNQMQE 230
G + + + QMQ
Sbjct: 717 AGLVAEGLEYLGQMQS 732
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 30/253 (11%)
Query: 14 HAHKL-NTHPLIHGYPFLRTRLASTFSL-NTEMKRCNSFISRLCKE------GRTDHARK 65
H H L NT L + FL++ L S N++ K+ + +LC E GR H
Sbjct: 60 HFHNLCNTGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFI 119
Query: 66 VFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEA 125
+ D+ L ++ Y C ++ +F+ ++ LW +L+GY+ + ++A
Sbjct: 120 STSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDA 179
Query: 126 RKLFDG--------PDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS----WN 173
+F PD T ++ V + + E + + K +S N
Sbjct: 180 VFVFVEMISLTEFVPDN----FTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGN 235
Query: 174 IMMGGYGQNGQIEKALDLFRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQMQERER 233
++ YG+ G +E A+ +F +MP+ RN+VSWN+++ A + G E++ F + +
Sbjct: 236 ALIAMYGKFGFVESAVKVFDKMPQ--RNLVSWNSVMYACLENGVFEESYGLFKGLLNGDE 293
Query: 234 ----DVSSWTTIV 242
DV++ T++
Sbjct: 294 GLMPDVATMVTVI 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 53/258 (20%)
Query: 34 LASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKC----G 89
LA L E+K +S + K G AR +FD E+++ W++MI GY K G
Sbjct: 324 LALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRG 382
Query: 90 MIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKL-------FDGPDAEKSVSTWS 142
+ RK+ QM ++ T+LN C + KL + +
Sbjct: 383 AFELLRKM--QMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVAN 440
Query: 143 TMVNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRM----PEP 198
V GY K + AE +F M + SWN ++GG+ QNG KALDL+ M EP
Sbjct: 441 AFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEP 500
Query: 199 E----------------------------RNVVSWN-----TIIKALVRCGRIEDAQWHF 225
+ RN + +++ V+CG+I A+ F
Sbjct: 501 DLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFF 560
Query: 226 NQMQERERDVSSWTTIVD 243
+ M+ E+++ W T+++
Sbjct: 561 DNME--EKNLVCWNTMIN 576
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 79/263 (30%)
Query: 47 CNSFISRLCKEGRTDHARKVFDQMPER--------------------------------- 73
C++ IS L G ++ A K++ + ER
Sbjct: 46 CSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDAT 105
Query: 74 ------DMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARK 127
D+ + + +I+ Y KC ++ AR++FD + RD WT++ + Y++CG ++
Sbjct: 106 RCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMD 165
Query: 128 LF---------DGPDAEKSV-----------------------------STWSTMVNGYV 149
+F P S+ S +V+ Y
Sbjct: 166 VFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYA 225
Query: 150 KINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNT 207
K + EA +F MP R VSWN ++ Y +N + EK LF +M + +WN
Sbjct: 226 KCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNA 285
Query: 208 IIKALVRCGRIEDAQWHFNQMQE 230
+I + GR E+A F +MQ+
Sbjct: 286 VIGGCMENGRSEEAVEMFRKMQK 308
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 20/176 (11%)
Query: 58 GRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQMAERDTRL-WTTMLNGY 116
G + AR++FD +P+ D T+I+ G+ EA K++ + ER + L
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 117 IECGMIKEARKLFDGPD------AEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV 170
C + +A ++ + D V + +++ Y K +E A R+F ++ R V
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 171 SWNIMMGGYGQNGQIEKALDLFRRM------PEPERNVVSWNTIIKALVRCGRIED 220
SW + Y + G K +D+FR M P P T+ L C ++D
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPM-------TVSSILPACAELKD 194
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 5 LPPLSFILMHAHKLNTHPLIHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHAR 64
LP SF + L IH Y F ++ ++ + + K G + +R
Sbjct: 322 LPACSF----SENLRMGKEIHCYVFRHWKVG-------DLTSTTALLYMYAKCGDLNLSR 370
Query: 65 KVFDQMPERDMRLWDTMINGYIKCGMIKEARKLFDQM----AERDTRLWTTMLNGYIECG 120
VFD M +D+ W+TMI G KEA LFD+M + ++ +T +L+G
Sbjct: 371 NVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSR 430
Query: 121 MIKEARKLFD--GPD--AEKSVSTWSTMVNGYVKINQIEEAERLFYEMP-ERKDVSWNIM 175
+++E ++F+ G D E + +S +V+ Y + ++ EA + MP E +W +
Sbjct: 431 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGAL 490
Query: 176 MGGYGQNGQIE----KALDLFRRMPEPERNVVS-WNTIIKA 211
+ +E A LF P N VS +N ++ A
Sbjct: 491 LAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTA 531
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
IHG+ + + F C++ +S K AR VFD MP RD+ W+ ++
Sbjct: 201 IHGFAVRHGMVVNLFV-------CSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 253
Query: 84 GYIKCGMIKEARKLFDQMAERDTRL----WTTMLNGYIECGMIKEARKLFDG-------P 132
Y K ++ LF +M+ R W ++ G +E G +EA ++F P
Sbjct: 254 AYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKP 313
Query: 133 DAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDV-SWNIMMGGYGQNGQIEKALDL 191
+ E ++S+ + + +E + + D+ S ++ Y + G + + ++
Sbjct: 314 N-EITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNV 372
Query: 192 FRRMPEPERNVVSWNTIIKALVRCGRIEDAQWHFNQM 228
F M ++VV+WNT+I A G ++A + F++M
Sbjct: 373 FDMMRR--KDVVAWNTMIIANAMHGNGKEALFLFDKM 407
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 103/200 (51%), Gaps = 17/200 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPERDMR----LWDTMINGYIKCGMIKEARKLFDQMAE 103
N+ + CK G A +F +M E+ ++ ++ +I G G K+A L ++M E
Sbjct: 216 NAIMDGFCKGGFVSEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMME 275
Query: 104 R----DTRLWTTMLNGYIECGMIKEARKLFD---GPDAEKSVSTWSTMVNGYVKINQIEE 156
+ D + +T +++G+ + G+I EA+ + E +V T+++++ GY +N+I+E
Sbjct: 276 KGVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDE 335
Query: 157 AERLFYEMPERK----DVSWNIMMGGYGQNGQIEKALDLFRRMPEPER--NVVSWNTIIK 210
A ++F M +K V++N ++ G+ + ++KA+ L M +VV+W T++
Sbjct: 336 AIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVS 395
Query: 211 ALVRCGRIEDAQWHFNQMQE 230
G+ A+ F M++
Sbjct: 396 GFCEVGKPLAAKELFFTMKQ 415
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 48 NSFISRLCKEGRTDHARKVFDQMPER----DMRLWDTMINGYIKCGMIKEARKLFDQMAE 103
NS I CK D A + ++M D+ W T+++G+ + G A++LF M +
Sbjct: 356 NSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQ 415
Query: 104 RDT--RLWT--TMLNGYIECGMIKEARKLF---DGPDAEKSVSTWSTMVNGYVKINQIEE 156
L T +L+G I+C EA LF + D + + ++ M++G K ++ +
Sbjct: 416 YGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALEESDLDLDIVIYNVMIDGLCKDGKLND 475
Query: 157 A----ERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEP--ERNVVSWNTIIK 210
A RL + ++NIM+GG + G ++ A DL +M E + N S+N ++
Sbjct: 476 ARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAEDLLMKMEENGCQPNKCSYNIFVQ 535
Query: 211 ALVRCGRIEDAQWHFNQMQERERDVSSWTT 240
L+R + ++ + M+ + V + TT
Sbjct: 536 GLLRKRDVLRSKKYLQIMKNKGFAVDATTT 565
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 38 FSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMINGYIKCGMIKEARKL 97
+T + N+ I+ G D A K+FD+M RD+ W T+I+ +K + EA +
Sbjct: 106 LGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSV 165
Query: 98 FDQM--AERDTRLW---TTMLN--------GYIECGMIKEARKLFDGPDAEKSVSTWSTM 144
F QM RD R W ML+ G IE G+ + + G +V + +
Sbjct: 166 FQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMG--IVMTVPLGTAL 223
Query: 145 VNGYVKINQIEEAERLFYEMPERKDVSWNIMMGGYGQNGQIEKALDLFRRMPEPERNVVS 204
+N Y + I+ + ++F EMPER V+W ++ G +G+ +AL +F M E
Sbjct: 224 INMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLK-PD 282
Query: 205 WNTIIKALVRC---GRIEDAQWHFNQMQE 230
I LV C G +ED F M++
Sbjct: 283 GALFIGVLVACSHGGLVEDGWRVFESMRD 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 17/149 (11%)
Query: 77 LWDTMINGYIKCGMIKEARKLFDQMAERDTRLWTTMLNGYIECGMIKEARKLFD------ 130
L +IN Y +CG+I + K+FD+M ER+ WT ++NG G +EA K+F
Sbjct: 219 LGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESG 278
Query: 131 -GPDAEKSVSTWSTMVNGYVKINQIEEAERLFYEMPERKDVS-----WNIMMGGYGQNGQ 184
PD + +G +E+ R+F M + + + M+ G+ G
Sbjct: 279 LKPDGALFIGVLVACSHG----GLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGL 334
Query: 185 IEKALDLFRRMPEPERNVVSWNTIIKALV 213
I +A D MP +V+ W T++ A V
Sbjct: 335 ILEAFDFVEEMPLKPNSVI-WRTLLGACV 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 24 IHGYPFLRTRLASTFSLNTEMKRCNSFISRLCKEGRTDHARKVFDQMPERDMRLWDTMIN 83
+H + +R + T L T + I+ + G D + KVFD+MPER++ W +IN
Sbjct: 204 VHSF-IVRMGIVMTVPLGTAL------INMYSRCGLIDRSVKVFDEMPERNVVTWTALIN 256
Query: 84 GYIKCGMIKEARKLFDQMAER----DTRLWTTMLNGYIECGMIKEARKLFDGPDAEKSVS 139
G G +EA K+F +M E D L+ +L G++++ ++F+ E +
Sbjct: 257 GLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIK 316
Query: 140 T----WSTMVNGYVKINQIEEAERLFYEMPERKD-VSWNIMMGG---YGQNGQIEKA 188
+ MV+ + I EA EMP + + V W ++G + G EKA
Sbjct: 317 PMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKA 373