Miyakogusa Predicted Gene

Lj0g3v0155949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0155949.1 Non Characterized Hit- tr|J3L1L7|J3L1L7_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,30,3e-19,coiled-coil,NULL; seg,NULL,CUFF.9634.1
         (180 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069420.1 | Sad1/UNC-like carboxy-terminal protein | LC | ...   206   1e-53
Medtr3g006320.1 | galactose-binding protein | HC | chr3:642744-6...   194   4e-50
Medtr4g030960.2 | galactose-binding protein | HC | chr4:10545810...   132   2e-31
Medtr4g030960.1 | galactose-binding protein | HC | chr4:10545703...   132   2e-31

>Medtr1g069420.1 | Sad1/UNC-like carboxy-terminal protein | LC |
           chr1:30032795-30025776 | 20130731
          Length = 721

 Score =  206 bits (523), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 101/157 (64%), Positives = 129/157 (82%)

Query: 1   MPGDTVLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDI 60
           MPGDTVLKILMQKV+ LD+NL  LE+YME LNSRYVNIFK YSKDI E D++++ IKE I
Sbjct: 419 MPGDTVLKILMQKVRTLDLNLIVLERYMEDLNSRYVNIFKEYSKDIEETDVVLQKIKEGI 478

Query: 61  RSFLHQQEVMMKDVSELDSWKSHFSVQFDHIRRDNAMLRNEVEKVLENQVSLEDKGVVVF 120
           ++ + QQ+V+ K   +L+SWKS  S+Q DH+ RDNA+LR+EVEKV E QVSLE+KGV+VF
Sbjct: 479 KNLIDQQDVIAKYAGDLNSWKSQVSLQLDHLLRDNAVLRSEVEKVREKQVSLENKGVIVF 538

Query: 121 LVCVIFSLIAILRLSLDMIISIYRVLSFNKTIHSRKF 157
           L+C IFSLIA+LRLSLDM  ++YR L  ++T+ SR+F
Sbjct: 539 LLCCIFSLIALLRLSLDMAKNVYRALMVDRTVDSREF 575


>Medtr3g006320.1 | galactose-binding protein | HC |
           chr3:642744-636552 | 20130731
          Length = 576

 Score =  194 bits (493), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 96/124 (77%), Positives = 110/124 (88%)

Query: 1   MPGDTVLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDI 60
           MPGDTVLKILMQKV+ LD+NLS LEQY+E LNSRYVNIFK YSKDIG+KD++++MIKEDI
Sbjct: 411 MPGDTVLKILMQKVRYLDLNLSVLEQYLEDLNSRYVNIFKEYSKDIGDKDIVLQMIKEDI 470

Query: 61  RSFLHQQEVMMKDVSELDSWKSHFSVQFDHIRRDNAMLRNEVEKVLENQVSLEDKGVVVF 120
           RSF+ +Q  MMKDVS+LDSWKSHFS+Q DHI RDNA+LR EVEKVLENQVSLE KGV+VF
Sbjct: 471 RSFIDRQNNMMKDVSDLDSWKSHFSMQLDHILRDNAVLRYEVEKVLENQVSLETKGVLVF 530

Query: 121 LVCV 124
            V  
Sbjct: 531 CVAT 534


>Medtr4g030960.2 | galactose-binding protein | HC |
           chr4:10545810-10548068 | 20130731
          Length = 526

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 80/99 (80%)

Query: 1   MPGDTVLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDI 60
           MPGDTVLKILMQKV+ LD+NL  LE+YME LNSRYVNIFK YSKD GEKD++++ IKEDI
Sbjct: 428 MPGDTVLKILMQKVRTLDVNLFVLERYMEDLNSRYVNIFKDYSKDTGEKDIVLQKIKEDI 487

Query: 61  RSFLHQQEVMMKDVSELDSWKSHFSVQFDHIRRDNAMLR 99
           ++ +  Q+V  KD S+L SWKS  S Q +H+ +DNA+LR
Sbjct: 488 KNLIDHQDVSAKDASDLISWKSQVSSQLNHLIQDNAVLR 526


>Medtr4g030960.1 | galactose-binding protein | HC |
           chr4:10545703-10548068 | 20130731
          Length = 526

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 80/99 (80%)

Query: 1   MPGDTVLKILMQKVQNLDINLSFLEQYMEVLNSRYVNIFKLYSKDIGEKDLLIRMIKEDI 60
           MPGDTVLKILMQKV+ LD+NL  LE+YME LNSRYVNIFK YSKD GEKD++++ IKEDI
Sbjct: 428 MPGDTVLKILMQKVRTLDVNLFVLERYMEDLNSRYVNIFKDYSKDTGEKDIVLQKIKEDI 487

Query: 61  RSFLHQQEVMMKDVSELDSWKSHFSVQFDHIRRDNAMLR 99
           ++ +  Q+V  KD S+L SWKS  S Q +H+ +DNA+LR
Sbjct: 488 KNLIDHQDVSAKDASDLISWKSQVSSQLNHLIQDNAVLR 526