Miyakogusa Predicted Gene

Lj0g3v0155659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0155659.1 Non Characterized Hit- tr|A5B8V3|A5B8V3_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,39.44,2e-19,
,CUFF.9616.1
         (171 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g012450.1 | late embryogenesis abundant (LEA) hydroxyproli...   174   3e-44
Medtr2g102080.1 | late embryogenesis abundant protein | HC | chr...   103   9e-23
Medtr6g086455.1 | late embryogenesis abundant protein | HC | chr...    71   6e-13

>Medtr4g012450.1 | late embryogenesis abundant (LEA)
           hydroxyproline-rich glycoprotein family protein,
           putative | HC | chr4:3300288-3298783 | 20130731
          Length = 197

 Score =  174 bits (441), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/151 (52%), Positives = 105/151 (69%), Gaps = 3/151 (1%)

Query: 11  CCKF---TVVVALCLAGAVFFWPWSPQVRMSKVTGRQVKVHPLPPVRADVWISVAVRVQN 67
           CC F    VV+ALC+    F WP +P++ M  +  ++ KVHPLPP+  DV +SV V++ N
Sbjct: 17  CCVFLLWIVVLALCITALFFLWPLNPEIEMESLIVKRAKVHPLPPLSVDVSLSVTVKIHN 76

Query: 68  RDVYWMDLEEVDVGVKYRGKKLGHVESKRWHVRRWGTIHAFGELESSALPSADVAHLLQD 127
           + +YWM+L EVDVG+KYRG KLGHVE++ WHV+ WG+ H FGELE   LPS DVAHL+QD
Sbjct: 77  KVLYWMELAEVDVGIKYRGHKLGHVETRGWHVKGWGSEHVFGELEFGGLPSPDVAHLMQD 136

Query: 128 LSKGKVFFHTVTEVTGYVGFLSFPLPIEFKV 158
           L+K +V FHT   V G +G  +F  P  FKV
Sbjct: 137 LAKKRVHFHTAVGVVGNLGLFAFHFPKIFKV 167


>Medtr2g102080.1 | late embryogenesis abundant protein | HC |
           chr2:43926025-43927347 | 20130731
          Length = 200

 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 5/134 (3%)

Query: 28  FWPWSPQVRMSKVTGRQVKVHPLPPVRADVWISVAVRVQNRDVYWMDLEEVDVGVKYRGK 87
           F+P  P +++ ++  +++KVH +P +  D+ +   +RVQN DVY MD   VDV V YRGK
Sbjct: 4   FYPSDPYLKIVRLKLKKIKVHRVPHITVDISMLFTLRVQNVDVYSMDFGAVDVAVSYRGK 63

Query: 88  KLGHVESKRWHVRRWGTIHAFGELESSA---LPSADVAHLLQDLSKGKVFFHTVTEVTGY 144
            LGHV SK  HVR  G+     + E S    LP  ++  LL+DL+KG V F TV++V G 
Sbjct: 64  PLGHVTSKNGHVRAMGSSFVDADAEFSGIGVLP--EIVLLLEDLAKGMVPFDTVSQVRGK 121

Query: 145 VGFLSFPLPIEFKV 158
           +G L F  PI+ K+
Sbjct: 122 MGILFFYFPIKAKL 135


>Medtr6g086455.1 | late embryogenesis abundant protein | HC |
           chr6:32516778-32512401 | 20130731
          Length = 262

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 81/148 (54%), Gaps = 3/148 (2%)

Query: 15  TVVVALCLAGAVFF-WPWSPQVRMSKVTGRQVKVHPLPPVRADVWISVAVRVQNRDVYWM 73
           +  V L LA A+FF +P  P++ ++++    + +   P    D+  S+ ++++NRD + +
Sbjct: 67  SATVLLFLAAAIFFLYPSDPEIHLARIQLNHIAIKANPKPILDLSFSLKLKIRNRDFFSV 126

Query: 74  DLEEVDVGVKYRGKKLGHVES-KRWHVRRWGTIHAFGELESSALPSA-DVAHLLQDLSKG 131
             +++DV + YRG+++G V S     +R  G+ +    L   A     D  +L++D+ KG
Sbjct: 127 AYDKLDVSLGYRGREIGTVSSVGGGKIRARGSDYVDVVLSIDAFEVIYDAFYLIEDMVKG 186

Query: 132 KVFFHTVTEVTGYVGFLSFPLPIEFKVF 159
            + F TV++V G +GF+     +  +V+
Sbjct: 187 VIVFDTVSKVDGKLGFIPLKATVSCEVY 214