Miyakogusa Predicted Gene
- Lj0g3v0155199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0155199.1 Non Characterized Hit- tr|B9FJY2|B9FJY2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,35.82,5e-19,Tub_2,LURP1-like domain; Tubby C-terminal
domain-like,Tubby C-terminal-like domain; seg,NULL; TRANSL,CUFF.9592.1
(236 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g099000.1 | tubby C 2 protein | HC | chr8:41518271-4151699... 305 2e-83
Medtr2g103840.1 | LURP-one-like protein | HC | chr2:44705927-447... 107 7e-24
Medtr4g010180.1 | LURP-one-like protein | HC | chr4:2276105-2278... 102 4e-22
Medtr2g103850.1 | LURP-one-like protein | HC | chr2:44715912-447... 95 7e-20
Medtr8g023060.1 | tubby C 2 protein | HC | chr8:8230795-8229295 ... 87 1e-17
Medtr7g072120.1 | LURP-one-like protein | HC | chr7:26795170-267... 70 1e-12
Medtr7g072270.1 | LURP-one-like protein | HC | chr7:26835816-268... 67 1e-11
Medtr7g072140.1 | LURP-one-like protein | HC | chr7:26800151-268... 67 1e-11
Medtr8g097400.1 | tubby C 2 protein | HC | chr8:40817758-4081683... 65 6e-11
Medtr7g072170.1 | LURP-one-like protein | HC | chr7:26805158-268... 65 7e-11
Medtr0415s0060.1 | tubby C 2 protein | HC | scaffold0415:14576-1... 63 2e-10
Medtr4g029430.1 | tubby C 2 protein | HC | chr4:10170282-1017167... 59 5e-09
Medtr8g097390.1 | tubby C 2 protein | HC | chr8:40812627-4081160... 58 8e-09
Medtr8g097410.1 | tubby C 2 protein | HC | chr8:40826440-4082538... 58 9e-09
Medtr8g097380.1 | tubby C 2 protein | HC | chr8:40807475-4080656... 57 1e-08
Medtr7g072250.1 | tubby C 2 protein | HC | chr7:26824094-2683147... 52 7e-07
Medtr7g072270.2 | LURP-one-like protein | HC | chr7:26835816-268... 51 8e-07
Medtr8g097370.1 | tubby C 2 protein | HC | chr8:40805821-4080484... 51 8e-07
>Medtr8g099000.1 | tubby C 2 protein | HC | chr8:41518271-41516992 |
20130731
Length = 233
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/208 (74%), Positives = 176/208 (84%), Gaps = 6/208 (2%)
Query: 32 KYPM--TEGGLCTTTSLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHPDEVTLMDA 89
+YP+ TEG LCT++SLTVW+KSLVI+CKG FTVIDS GNLVYRVDNY LHP EV LMDA
Sbjct: 29 RYPIIVTEGNLCTSSSLTVWKKSLVINCKG-FTVIDSCGNLVYRVDNYSLHPHEVVLMDA 87
Query: 90 SGNSLLTMRHRRKKLGLVDSWFVYEGETGKLHIKRS-KLGNLRKSPVCCVRKRVNILNGN 148
SGNSLL+MR R++KLGL DSWFVYEGETG +++ KL RKSPVCCVRK VNILNGN
Sbjct: 88 SGNSLLSMR-RQRKLGLGDSWFVYEGETGNHSTRKTCKLERSRKSPVCCVRKSVNILNGN 146
Query: 149 SGVQACVYRVAPDSDDKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGI 208
+ VQA V+RVA DSD K A FTVEGSYA RTCKVLDE K+ VAE+KRKE N+KDVSFGI
Sbjct: 147 TNVQAYVHRVASDSD-KRQAAFTVEGSYARRTCKVLDENKRAVAELKRKETNTKDVSFGI 205
Query: 209 EIFQLIVHPGFDPAFAMGLVLLLDQMFS 236
E+FQL+VHPGFDP FAM LVL+LDQMF+
Sbjct: 206 EVFQLVVHPGFDPGFAMALVLVLDQMFT 233
>Medtr2g103840.1 | LURP-one-like protein | HC |
chr2:44705927-44703600 | 20130731
Length = 223
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 99/191 (51%), Gaps = 24/191 (12%)
Query: 47 TVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHP---DEVTLMDASGNSLLTMRHRRKK 103
TV + SL S G FTV DSHG LV+RVD+Y DE+ LMD G LLT+R RK+
Sbjct: 32 TVLKTSLFFSGDG-FTVYDSHGQLVFRVDSYGPDSRDLDELVLMDPDGRCLLTVR--RKR 88
Query: 104 LGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPDSD 163
L W ++GE +R P V++ I +GV VY D
Sbjct: 89 PSLHQRWEGFKGE------RRDG-----DKPTFSVKRSSMIGRARTGVTVEVY------D 131
Query: 164 DKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAF 223
+ G + +EG ++ R C V + K+ VAEI RK + V G E+ L V PGFD AF
Sbjct: 132 NPGEE-YHIEGCFSQRCCTVFNGMKENVAEIHRKVDPTTGVMLGKEVLSLCVKPGFDAAF 190
Query: 224 AMGLVLLLDQM 234
AMG VL+LDQ+
Sbjct: 191 AMGFVLVLDQI 201
>Medtr4g010180.1 | LURP-one-like protein | HC | chr4:2276105-2278567
| 20130731
Length = 211
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 102/197 (51%), Gaps = 30/197 (15%)
Query: 44 TSLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNY---ILHPDEVTLMDASGNSLLTMRHR 100
T+LTV + S S GF V D G LV+R D+Y +E+ LM+ G SLLT+R
Sbjct: 18 TNLTVLKTSRFFS-GDGFVVYDCKGQLVFRFDSYGPNTRDKEELVLMNTHGRSLLTLR-- 74
Query: 101 RKKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNI---LNGNSGVQACVYR 157
RKK L W EG G+ + N+++S + R R+ I ++ N GV+
Sbjct: 75 RKKPSLHQRW---EGFKGERKDGDKPIFNVKRSSIIA-RSRMTITVEVHDNPGVE----- 125
Query: 158 VAPDSDDKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHP 217
+ +EG + R CK+ + KK VAEI+RK + V G E+F L V P
Sbjct: 126 ------------YLIEGCFPQRCCKIFNATKKLVAEIRRKVDPTTSVMLGKEVFMLCVQP 173
Query: 218 GFDPAFAMGLVLLLDQM 234
FD +FAMGLVL+LDQ+
Sbjct: 174 DFDVSFAMGLVLVLDQI 190
>Medtr2g103850.1 | LURP-one-like protein | HC |
chr2:44715912-44713408 | 20130731
Length = 224
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 99/193 (51%), Gaps = 28/193 (14%)
Query: 47 TVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHPD-----EVTLMDASGNSLLTMRHRR 101
TV + +L + GFTV D +G + +RVD+Y PD E+ LMD G LLT+ R
Sbjct: 33 TVLKTTLFFA-GDGFTVYDCNGQVAFRVDSY--GPDSRDLHELILMDPQGRCLLTVH--R 87
Query: 102 KKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPD 161
K+ L W ++GE K+ + P V++ I +GV VY
Sbjct: 88 KRPSLHQRWEGFKGE--KMEGDK---------PTFSVKRSSMIGRPRAGVTVEVY----- 131
Query: 162 SDDKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDP 221
D+ G + +EG ++ R CKV + K+ VAEI RK + + G E+F L V PGFD
Sbjct: 132 -DNPGEE-YHIEGCFSQRGCKVFNAMKEIVAEIYRKVDPTTGNTLGKEVFSLCVKPGFDA 189
Query: 222 AFAMGLVLLLDQM 234
AFAMG +L+LD +
Sbjct: 190 AFAMGFILVLDHI 202
>Medtr8g023060.1 | tubby C 2 protein | HC | chr8:8230795-8229295 |
20130731
Length = 199
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 19/186 (10%)
Query: 45 SLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYIL-HPDEVTLMDASGNSLLTMRHRRKK 103
S T+W KSLV++ KG TV DS+G + YRVDNY H D+V LMD GN+L T+ ++ K
Sbjct: 23 SFTLWMKSLVLNGKG-CTVFDSNGQIAYRVDNYNSNHRDQVHLMDQRGNTLFTILKKQYK 81
Query: 104 LGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPDSD 163
L +EG KL R N +K P V K +I +S Y V D
Sbjct: 82 LSR-----FWEGY--KLPATR----NDQKGPCFRVGKTYSISKWDSS-----YEVELGLD 125
Query: 164 DKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAF 223
+ +E S CK++D+ VAE++RK++ + G ++F ++V P D +
Sbjct: 126 KNQPYNYKIESSTCKPACKIMDKNGVIVAELRRKKSTC-GIDLGNDVFTMVVEPNIDLSL 184
Query: 224 AMGLVL 229
MG+V+
Sbjct: 185 IMGVVV 190
>Medtr7g072120.1 | LURP-one-like protein | HC |
chr7:26795170-26797004 | 20130731
Length = 212
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 24/191 (12%)
Query: 46 LTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILH-PDEVTLMDASGNSLLTMRHRRKKL 104
L V +K + IS G F V D +GN+V++V +L D L+DA+GN + T+R RK +
Sbjct: 36 LAVVKKVMTIS-DGNFAVTDVNGNIVFKVKGSLLTLRDRRVLLDAAGNPITTLR--RKIV 92
Query: 105 GLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNI-LNGNSGVQACVYRVAPDSD 163
+ D W Y GE+ + + L++S + ++ ++++ L GN+ C
Sbjct: 93 TMHDRWEAYRGESTH---AKDLIFTLKRSSLIQMKTKLDVFLAGNTKEDVC--------- 140
Query: 164 DKGHAMFTVEGSYADRTCKVLD-EYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPA 222
F V GS+ +R+C V E VA++ +K + + + F + V+P D A
Sbjct: 141 -----DFKVRGSWLERSCIVYAGESNNIVAQMHKKHTVTS-ILMDKDHFSVTVYPNVDYA 194
Query: 223 FAMGLVLLLDQ 233
F + L+++LD+
Sbjct: 195 FIVALIVILDE 205
>Medtr7g072270.1 | LURP-one-like protein | HC |
chr7:26835816-26838300 | 20130731
Length = 212
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 23/197 (11%)
Query: 41 CTTTSLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILH-PDEVTLMDASGNSLLTMRH 99
CT + + V++ TV D +GN+V++V + D L+DA+GN ++T+R
Sbjct: 28 CTPYPVELAVVKKVMTIADNLTVTDVNGNIVFKVKGSVFTIRDHRVLVDAAGNPIITLR- 86
Query: 100 RRKKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNI-LNGNSGVQACVYRV 158
RK L + D W Y G++ + + L++S + + ++++ L GN+ C
Sbjct: 87 -RKILTMHDRWEAYRGQSTN---AKDLIFTLKRSSLMQFKTKLDVFLAGNTKEDVC---- 138
Query: 159 APDSDDKGHAMFTVEGSYADRTCKVLD-EYKKTVAEIKRKEANSKDVSFGIEIFQLIVHP 217
F V+GS+ +R+C V E VA++ +K + + G + F + V+P
Sbjct: 139 ----------DFKVKGSWFERSCSVYAGESNNIVAQMHKKHTVTS-ILIGKDHFMVTVYP 187
Query: 218 GFDPAFAMGLVLLLDQM 234
D AF + L+++L ++
Sbjct: 188 NIDYAFIVALIVILGEI 204
>Medtr7g072140.1 | LURP-one-like protein | HC |
chr7:26800151-26801873 | 20130731
Length = 215
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 46 LTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILH-PDEVTLMDASGNSLLTMRHRRKKL 104
L V +K + IS G F V D +GN+V++V +L D L+DA+G + T+R RK +
Sbjct: 36 LAVVKKVMTIS-DGNFAVTDVNGNIVFKVKGSLLTLRDRRVLVDAAGYPIATLR--RKIM 92
Query: 105 GLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNI-LNGNSGVQACVYRVAPDSD 163
+ D W + GE+ + + L++S + + ++++ L N C
Sbjct: 93 TMHDRWEAFRGESTD---AKDLIFTLKRSSLIQFKTKLDVFLASNKKENVC--------- 140
Query: 164 DKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAF 223
F V+GS+ DR+C V + K+ + + G + F + ++P D AF
Sbjct: 141 -----DFKVKGSWFDRSCIVYAGESNNIVAQMHKKYTVQSILIGKDNFMVTIYPNVDYAF 195
Query: 224 AMGLVLLLDQM 234
+ L+++LD++
Sbjct: 196 IVALIVILDEI 206
>Medtr8g097400.1 | tubby C 2 protein | HC | chr8:40817758-40816834 |
20130731
Length = 205
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 33 YPMTEGGLCTTT-------------SLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYIL 79
YP E C+ + + TVW KSLV+ G TV DS+GN+VYRVDNY
Sbjct: 5 YPQQESTACSVSNDQCHISRSNKRETYTVWMKSLVLH-SNGCTVYDSNGNIVYRVDNYDK 63
Query: 80 HP-DEVTLMDASGNSLLTMRHRRKKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCV 138
EV LMD GN L T+ +K L W Y+ + S G+ + P V
Sbjct: 64 KGRREVNLMDLQGNLLCTI---KKTLLAFGCWEGYK------YCNNSNFGSQEEQPWFQV 114
Query: 139 RKRVNILNGNSGVQACVYRVAPDSDDKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKE 198
++ I+ G Q + S + + S+A R ++++ + +AE K+K+
Sbjct: 115 KRCTKIITGKVACQ-----IKVGSQNLCIERISTGKSFAFR---IVNKNGEIIAEAKQKQ 166
Query: 199 ANSKDVSFGIEIFQLIVHPGFDPAFAMGLV 228
++S V ++ L + G D + M L+
Sbjct: 167 SSS-GVVLSNDVLTLDLAAGTDHSLIMALI 195
>Medtr7g072170.1 | LURP-one-like protein | HC |
chr7:26805158-26808002 | 20130731
Length = 226
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 24/192 (12%)
Query: 46 LTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYIL-HPDEVTLMDASGNSLLTMRHRRKKL 104
L V +K + IS G F V D +GN+V++V +L D L+DA+ N + T+R RK +
Sbjct: 36 LAVVKKVIAIS-DGNFVVTDVNGNIVFKVKVSLLTFRDRRVLVDAADNPITTLR--RKIV 92
Query: 105 GLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNI-LNGNSGVQACVYRVAPDSD 163
+ D W Y GE+ + + L++S + ++ ++++ L N+ C
Sbjct: 93 TMHDRWEAYRGESTD---SKDLIFTLKRSSLIQMKTKLDVFLANNTKEDVC--------- 140
Query: 164 DKGHAMFTVEGSYADRTCKVLD-EYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPA 222
F V+GS+ +R+C V E VA++ +K + + G + F + ++P D A
Sbjct: 141 -----DFKVKGSWFERSCIVYAGESNNIVAQMHKKH-TVQSLLIGKDHFMVTIYPNVDYA 194
Query: 223 FAMGLVLLLDQM 234
F + L+++L+++
Sbjct: 195 FIVALIVILNEI 206
>Medtr0415s0060.1 | tubby C 2 protein | HC |
scaffold0415:14576-15530 | 20130731
Length = 200
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 45 SLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHP-DEVTLMDASGNSLLTMRHRRKK 103
+ TVW KSLV+ G TV DS+GN+VYRVDNY EV LMD GN L T+ +K
Sbjct: 25 TYTVWMKSLVLH-SNGCTVYDSNGNIVYRVDNYDKKGRREVNLMDLQGNLLCTI---KKT 80
Query: 104 LGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPDSD 163
L W Y+ + S G+ + P V++ I+ G AC +V S
Sbjct: 81 LLAFGCWEGYK------YCNNSNFGSQEEQPWFQVKRCTKIITGKV---ACQIKVG--SQ 129
Query: 164 DKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAF 223
+ + S+A R ++++ + +AE K+K+++S V ++ L + G D +
Sbjct: 130 NLCIERISTGKSFAFR---IVNKNGEIIAEAKQKQSSS-GVVLSNDVLTLDLAAGTDHSL 185
Query: 224 AMGLV 228
M L+
Sbjct: 186 IMALI 190
>Medtr4g029430.1 | tubby C 2 protein | HC | chr4:10170282-10171673 |
20130731
Length = 199
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 94/182 (51%), Gaps = 22/182 (12%)
Query: 54 VISCKGGFTVIDSHGNLVYRVDNYILHPDEVTLMDASGNSLLTMRHRRKKLGLVDSWFVY 113
V + FTV D +G + + + + D+ L+DA+G S++ M RRK + D W +
Sbjct: 34 VTTLTDNFTVKDFNGKIFFNLKSLY---DQSLLLDAAGKSVV-MTLRRKAMTGHDRWQAF 89
Query: 114 EGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPDSDDKGHAMFTVE 173
GE+ ++ + + ++++S + + ++++ ++ + D D F V+
Sbjct: 90 RGESTEV---KDLIFSVKRSTMFQTKIKLDVFLASNAKE--------DISD-----FKVK 133
Query: 174 GSYADRTCKVLD-EYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAFAMGLVLLLD 232
GS+ +R+C V E VA++ +KE + +FG + + VHP D AF + ++L+LD
Sbjct: 134 GSWLERSCVVYAGESHHIVAQMHKKET-VQSAAFGKDNLTVRVHPNVDYAFIVAVMLILD 192
Query: 233 QM 234
++
Sbjct: 193 EI 194
>Medtr8g097390.1 | tubby C 2 protein | HC | chr8:40812627-40811605 |
20130731
Length = 200
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 45 SLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHPD-EVTLMDASGNSLLTMRHRRKK 103
+ TVW KSLV+ G TV DS GN+VYRVDNY EV LMD GN L T+ +K+
Sbjct: 25 TYTVWMKSLVLH-SNGCTVYDSKGNIVYRVDNYDKKGGREVNLMDLQGNVLCTI---KKR 80
Query: 104 LGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPDSD 163
L + W G + S + ++ P V++ + SG AC +V S
Sbjct: 81 LLVFGCW------EGHKYCNNSTFRSQKEQPWFQVKRCHKVF---SGKIACQIKVG--SQ 129
Query: 164 DKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAF 223
+ ++ S+A R ++++ + +AE K+K+++S V ++ L + G D +
Sbjct: 130 NLCIERISIGKSFAFR---IVNKDGEIIAEAKQKQSSS-GVVLSNDVLTLDLATGVDHSL 185
Query: 224 AMGLV 228
L+
Sbjct: 186 ITALI 190
>Medtr8g097410.1 | tubby C 2 protein | HC | chr8:40826440-40825386 |
20130731
Length = 205
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 20/185 (10%)
Query: 45 SLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHPD-EVTLMDASGNSLLTMRHRRKK 103
+ TVW KSLV+ G TV DS+G++VYRV+NY EVTLM+ GN L T++ R
Sbjct: 30 TYTVWMKSLVLH-SNGCTVYDSNGSIVYRVENYDRKGGREVTLMNLKGNVLCTIKKRLLA 88
Query: 104 LGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQACVYRVAPDSD 163
G +EG + S L + P V++ ++ SG AC +V S
Sbjct: 89 FG------CWEGHK---YCNNSSLRRQEEQPWFKVKRCHKVI---SGKIACQIKVG--SQ 134
Query: 164 DKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPGFDPAF 223
+ ++ S+A R ++++ + +AE K+K+++S V ++ L + G D +
Sbjct: 135 NMCIERISIGKSFAFR---IVNKNGEIIAEAKQKQSSS-GVVLSNDVLTLDLAAGVDHSL 190
Query: 224 AMGLV 228
+ L+
Sbjct: 191 IIALI 195
>Medtr8g097380.1 | tubby C 2 protein | HC | chr8:40807475-40806560 |
20130731
Length = 205
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 34/190 (17%)
Query: 47 TVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILH-PDEVTLMDASGNSLLTMRHRRKKLG 105
TVW KSLV+ G TV DS GN+VYRVDNY EV LMD GN L T+ +K L
Sbjct: 32 TVWMKSLVLH-SNGCTVYDSKGNIVYRVDNYDKKGKREVNLMDQQGNLLCTI---KKTLL 87
Query: 106 LVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGNSGVQA-------CVYRV 158
W Y+ + S L + + P V++ + +G Q C+ R+
Sbjct: 88 AFGCWEGYK------YCNNSSLKSQEEQPWFKVKRCHKVFSGKIACQIKVGCQNLCIERI 141
Query: 159 APDSDDKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANSKDVSFGIEIFQLIVHPG 218
++ S+A R ++++ + +AE K+K ++S V +I L + G
Sbjct: 142 ------------SIGKSFAFR---IINKDGEIIAEAKQKLSSS-GVVLSNDILTLDLAAG 185
Query: 219 FDPAFAMGLV 228
D + M L+
Sbjct: 186 TDHSLIMALI 195
>Medtr7g072250.1 | tubby C 2 protein | HC | chr7:26824094-26831479 |
20130731
Length = 243
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 97/200 (48%), Gaps = 33/200 (16%)
Query: 45 SLTVWRKSLVISCKGG--------FTVIDSHGNLVYRVDNYILHPDEVTLMDASGNSLLT 96
+L V +KS + G T+ D + N+V+ V + L D L+DA+ N ++T
Sbjct: 59 NLAVVKKSYIYQMSGSAPVTIADNLTITDVNDNIVFTV--FTLG-DHRLLVDAARNPIIT 115
Query: 97 MRHRRKKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNI-LNGNSGVQACV 155
+R RK L + D W Y G++ ++ + +++S + + ++++ L GN+ C
Sbjct: 116 LR--RKILTMHDRWEAYRGQSTN---AKNMIFTVKRSSLIQFKTKLDVFLAGNTKEDVC- 169
Query: 156 YRVAPDSDDKGHAMFTVEGSYADRTCKVLD-EYKKTVAEIKRKEANSKDVSFGIEIFQLI 214
F V+GS+++R+C V E VA++ +K + ++ + F +
Sbjct: 170 -------------DFKVKGSWSERSCIVYAGESNNIVAQMHKKNTVT-NILIDKDHFMVK 215
Query: 215 VHPGFDPAFAMGLVLLLDQM 234
V P D AF + L+++L ++
Sbjct: 216 VCPNVDYAFIVALIVILGEI 235
>Medtr7g072270.2 | LURP-one-like protein | HC |
chr7:26835816-26838300 | 20130731
Length = 165
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 41 CTTTSLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILH-PDEVTLMDASGNSLLTMRH 99
CT + + V++ TV D +GN+V++V + D L+DA+GN ++T+
Sbjct: 28 CTPYPVELAVVKKVMTIADNLTVTDVNGNIVFKVKGSVFTIRDHRVLVDAAGNPIITL-- 85
Query: 100 RRKKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNI-LNGNSGVQACVYRV 158
RRK L + D W Y G++ + + L++S + + ++++ L GN+ C
Sbjct: 86 RRKILTMHDRWEAYRGQSTN---AKDLIFTLKRSSLMQFKTKLDVFLAGNTKEDVC---- 138
Query: 159 APDSDDKGHAMFTVEGSYADRTCKVLD-EYKKTVAEI 194
F V+GS+ +R+C V E VA++
Sbjct: 139 ----------DFKVKGSWFERSCSVYAGESNNIVAQV 165
>Medtr8g097370.1 | tubby C 2 protein | HC | chr8:40805821-40804842 |
20130731
Length = 228
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 37/201 (18%)
Query: 33 YPMTEGGLCTTT---SLTVWRKSLVISCKGGFTVIDSHGNLVYRVDNYILHPD-EVTLMD 88
YP E C + + TVW KSLV+ G T DS+G++VYRV+NY EV LM+
Sbjct: 5 YPHQESINCISNKRETYTVWMKSLVLH-SNGCTAYDSNGDIVYRVENYDRKGGREVNLMN 63
Query: 89 ASGNSLLTMRHRRKKLGLVDSWFVYEGETGKLHIKRSKLGNLRKSPVCCVRKRVNILNGN 148
GN L T++ R G +EG + S + + + P V++ I+ G
Sbjct: 64 LKGNVLCTIKKRLLAFG------CWEGHK---YCSNSNIRSQEEQPWFQVKRCHKIITGK 114
Query: 149 SGVQA-------CVYRVAPDSDDKGHAMFTVEGSYADRTCKVLDEYKKTVAEIKRKEANS 201
Q C+ R+ ++ S+A R ++++ + +A+ K+K+++S
Sbjct: 115 IACQIKVGCQNLCIERI------------SIGKSFAFR---IVNKDGQIIADAKQKQSSS 159
Query: 202 KDVSFGIEIFQLIVHPGFDPA 222
V ++ L + G D A
Sbjct: 160 -GVVLSNDVLTLDLAAGTDHA 179