Miyakogusa Predicted Gene

Lj0g3v0154989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154989.1 Non Characterized Hit- tr|I1K926|I1K926_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.18,0,WD40
repeat-like,WD40-repeat-containing domain; seg,NULL; no
description,WD40/YVTN repeat-like-conta,CUFF.9785.1
         (1095 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108470.1 | DDB1- and CUL4-associated factor-like protein ...  1340   0.0  

>Medtr3g108470.1 | DDB1- and CUL4-associated factor-like protein | HC
            | chr3:50133071-50123613 | 20130731
          Length = 1929

 Score = 1340 bits (3469), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 704/1031 (68%), Positives = 786/1031 (76%), Gaps = 33/1031 (3%)

Query: 1    MDAVFLQLQKDRKLGSSFVRTRWPAVDKFLACNGHVTMLELCQGPPPPVERYLHDLLQYA 60
            MDAVFLQLQKDRKLG +FVRT W  V+KFLA NGH+TMLELCQ PP  VERYLHDLLQYA
Sbjct: 812  MDAVFLQLQKDRKLGPAFVRTGWREVEKFLASNGHITMLELCQAPP--VERYLHDLLQYA 869

Query: 61   LDVLHIVTLVPSSRKMIVTATLSNNRVGTAVILDAANIVSNHDDPEIIRPALNVLVNLVC 120
            L VL IVTLVPSSRKMIV ATLS NR G +VILDAANI S+H DPEII+PALNVLVNLVC
Sbjct: 870  LGVLQIVTLVPSSRKMIVNATLSTNRAGISVILDAANIASSHVDPEIIQPALNVLVNLVC 929

Query: 121  PPPSISNKPASVTPGQQSASAQTSKGPMSETRDRTAERNVSDRPVNFSSQTDTREQNAES 180
            PPPSISNKP +V+ GQQ  S+Q S G + ETRDR AERN+          TD RE+N ES
Sbjct: 930  PPPSISNKPPAVSQGQQFPSSQASNGAL-ETRDRNAERNI----------TDPRERNGES 978

Query: 181  NAVDRDGAAAVNTQTV--------LAATSGLVGDHRISXXXXXXXXXXXXXXXXXYRQAR 232
            +AVDR  AAA+ TQ+V         +A+SGLVGD RIS                 Y QAR
Sbjct: 979  SAVDRGTAAALTTQSVNTTPQTPVPSASSGLVGDRRISLGAGARCAGLATQLEQGYHQAR 1038

Query: 233  EAVRANNGIKVLLHLLQQRIYSPPXXXXXXXXXXXXXXXXXXXDDIIAHILTKLQVGKKL 292
            EAVR NNGIKVLLHLLQ RIYSPP                   DD IAHILTKLQVGK+L
Sbjct: 1039 EAVRNNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKRL 1098

Query: 293  SELIRDSGSQTHGTEQGRWQAELSQAAIELIGVVTNSGHXXXXXXXXXXXXXXXXIEREA 352
            SELIRDSGS T GTEQGRWQAELSQAAIELIG+V N G                 IER A
Sbjct: 1099 SELIRDSGSTTLGTEQGRWQAELSQAAIELIGIVANLGRASTLVASDAATPALRRIERAA 1158

Query: 353  IAAATPISYDSRELLQLIHEYVRASGLSQTASILLKEAQLKPLPSLIAPSSLAQPPSTQE 412
            IAAATPI+Y SRELL LIHE+++ASGL QTAS+LLKEAQL  LPSL+APSSLAQ P+TQE
Sbjct: 1159 IAAATPITYPSRELLLLIHEHLQASGLGQTASLLLKEAQLTSLPSLLAPSSLAQQPTTQE 1218

Query: 413  APSVQLQWPSGRAP-GFLSDKLKLNAGDDD-VLGSDVSTRIGSAFTXXXXXXXXXXXXXX 470
              S Q+QWPSGR P GFL+ KLK N+ ++D  L SD  +    + T              
Sbjct: 1219 VSSTQIQWPSGRTPSGFLTSKLKYNSKNEDACLKSDAGSARKKSLTFSSSFGSHT----- 1273

Query: 471  XXRHQLDDSRQSSVRKVSSTSKGSSETAIVSETPSKLLEKHNIDSESQYKTPIILPMKRK 530
              RHQ+ DSR SS RK     K SSET+ V E PS+   KHN ++ SQ+KTPI LP KRK
Sbjct: 1274 --RHQVIDSRHSSTRKWLRAGKESSETSTV-ENPSESSVKHNTETGSQFKTPITLPTKRK 1330

Query: 531  LSDLKDTRVLSSSRKRLIAGDHGIRSPICITPNTVRKTNLQTDAIRFPTPSSNLRNQQGR 590
            LSDLKD  + SSS KRL  GD G+RSPIC   ++VRK++L TDA+   TP+ NLR+QQGR
Sbjct: 1331 LSDLKDIPMFSSSAKRLNVGDQGLRSPIC--SSSVRKSSLHTDAVGLFTPTGNLRSQQGR 1388

Query: 591  CSVDYVDENQNSMSNLGQFTPSSAAINDLQHSNSERMTLDSIVVQYLKHQHLQCPAXXXX 650
            C+ DYVD+NQ  +SNLGQ TPSS  +NDLQ +N ER+TLDS+VVQYLKHQH QCPA    
Sbjct: 1389 CTADYVDDNQYCISNLGQMTPSSQVVNDLQLNNPERVTLDSLVVQYLKHQHRQCPAPITT 1448

Query: 651  XXXXXXXXXXVCPEPKRSLDAASNVTARFKRREFKFIYGGVHGNRKDRQFVYSRFRPWRT 710
                      VCPEPKRSLDA SNVTAR   REFKF+YGGVHGNRKDRQFV+SRFRPWRT
Sbjct: 1449 LPPISLLHPHVCPEPKRSLDAPSNVTARLGTREFKFMYGGVHGNRKDRQFVFSRFRPWRT 1508

Query: 711  CRDDAGALLTCITFLGDSSRIAVGSHNGEVKLFDSNNNNVVESFTGHQYPLTLVQSFVSG 770
             RDDAGALLTCITF+GDSS IAVGSH GE+K FDSNNNNVVESFTGH  PLTLVQSFVSG
Sbjct: 1509 YRDDAGALLTCITFVGDSSHIAVGSHTGELKFFDSNNNNVVESFTGHDAPLTLVQSFVSG 1568

Query: 771  ETQLLLSSSSQDVRLWDASSLSSGTTHSFDGCKAARFSNSGNVFAALSSESAQREILLYD 830
            ETQLLLSSSS+DV++WDA+S+ +G T SF+GCKAARFSNSG  FAALSSES  REILLYD
Sbjct: 1569 ETQLLLSSSSKDVKMWDATSILAGPTRSFEGCKAARFSNSGKTFAALSSESTAREILLYD 1628

Query: 831  IQTCQLESKLTDTFTNFTGRGHVYPLIHFNPSDSMLLWNGVLWDQRVSEPVHRFDQFTDY 890
            IQ  +LE+ L+DTFT  TGRGH Y  IHF+P+DSMLLWNGVLWD RVS PVHRFDQFTDY
Sbjct: 1629 IQEGKLEATLSDTFTTSTGRGHAYSSIHFSPADSMLLWNGVLWDPRVSTPVHRFDQFTDY 1688

Query: 891  GGGGFHPAGNEVIINSEVWDLRKFSLLRSVPSLDQTEITFNAHGDVLYAILRRKIEDVMS 950
            GGGGFHPAGNEVIINSEVWDLRKF LLRSV SLDQT ITFNA GDV+YAILRR +EDVMS
Sbjct: 1689 GGGGFHPAGNEVIINSEVWDLRKFRLLRSVASLDQTAITFNARGDVMYAILRRNLEDVMS 1748

Query: 951  AVNTRRVKHPLFAAFRTVDAVNYSEIATIPVDRCVLDFATEPTDSIVGLVTMDDQDEMFA 1010
            A++ RRVKHPLF+AFRTVDA+NYS+IATIPVDRCVLDFATEPTDS VGL+TMDDQ +M++
Sbjct: 1749 AMHARRVKHPLFSAFRTVDAINYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQGDMYS 1808

Query: 1011 SARIYEIGRRR 1021
            SAR YEIGRRR
Sbjct: 1809 SARSYEIGRRR 1819