Miyakogusa Predicted Gene

Lj0g3v0154209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154209.1 tr|I3SFT9|I3SFT9_LOTJA Golgi SNAP receptor
complex member 1 OS=Lotus japonicus PE=2 SV=1,99.52,0,GOS-28 SNARE-
RELATED,Golgi SNAP receptor complex, subunit 1;
V-SNARE_C,NULL,CUFF.9553.1
         (211 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g025850.1 | SNAP receptor complex protein | HC | chr4:8848...   400   e-112
Medtr4g025850.2 | SNAP receptor complex protein | HC | chr4:8848...   316   1e-86
Medtr4g006570.3 | SNAP receptor complex protein | HC | chr4:7549...   112   2e-25
Medtr2g104910.1 | SNAP receptor complex protein | HC | chr2:4522...   105   2e-23
Medtr4g006570.2 | SNAP receptor complex protein | HC | chr4:7589...    99   2e-21
Medtr4g006570.6 | SNAP receptor complex protein | HC | chr4:7589...    99   3e-21
Medtr4g006570.1 | SNAP receptor complex protein | HC | chr4:7586...    99   3e-21
Medtr2g104910.2 | SNAP receptor complex protein | HC | chr2:4522...    97   1e-20
Medtr4g006570.4 | SNAP receptor complex protein | HC | chr4:7535...    91   8e-19
Medtr4g006570.5 | SNAP receptor complex protein | HC | chr4:7589...    91   8e-19

>Medtr4g025850.1 | SNAP receptor complex protein | HC |
           chr4:8848929-8855352 | 20130731
          Length = 240

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 197/212 (92%), Positives = 206/212 (97%), Gaps = 1/212 (0%)

Query: 1   MRDS-NLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRS 59
           MRD+ NL+LQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYV+GGSP +GSSRS
Sbjct: 1   MRDTTNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVEGGSPSVGSSRS 60

Query: 60  WKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNI 119
           WKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRR KGNI
Sbjct: 61  WKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRTKGNI 120

Query: 120 NSMREHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVL 179
           NSM+EHAELL SVRDDISDFK SGSMSPRMQLLRERAAIHGS SHID+VISQAQATR+VL
Sbjct: 121 NSMKEHAELLGSVRDDISDFKASGSMSPRMQLLRERAAIHGSTSHIDEVISQAQATRAVL 180

Query: 180 GSQRALFGDVQGKVKVLGDKFPIIRSLLGSIR 211
           GSQRALFGDVQGKV++LGDKFPIIRSLLGSIR
Sbjct: 181 GSQRALFGDVQGKVRLLGDKFPIIRSLLGSIR 212


>Medtr4g025850.2 | SNAP receptor complex protein | HC |
           chr4:8848962-8855193 | 20130731
          Length = 192

 Score =  316 bits (809), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/174 (89%), Positives = 163/174 (93%), Gaps = 1/174 (0%)

Query: 1   MRDS-NLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRS 59
           MRD+ NL+LQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYV+GGSP +GSSRS
Sbjct: 1   MRDTTNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVEGGSPSVGSSRS 60

Query: 60  WKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNI 119
           WKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRR KGNI
Sbjct: 61  WKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRTKGNI 120

Query: 120 NSMREHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQ 173
           NSM+EHAELL SVRDDISDFK SGSMSPRMQLLRERAAIHGS SH+  ++   Q
Sbjct: 121 NSMKEHAELLGSVRDDISDFKASGSMSPRMQLLRERAAIHGSTSHMKLLVKLKQ 174


>Medtr4g006570.3 | SNAP receptor complex protein | HC |
           chr4:754946-749536 | 20130731
          Length = 225

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 21/212 (9%)

Query: 6   LELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEM 65
           +E+  + W+ LRK+ARK+E  LD ++++Y KL            G        SW     
Sbjct: 1   MEVPTTSWDSLRKQARKLEAQLDEQMNAYRKL----VSTNLSTKGDAAQSDVESW----- 51

Query: 66  EIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREH 125
            I+ L+++L  +N  M +   S+G +  V+  L RH++IL + TQEF R++ ++ + +EH
Sbjct: 52  -IERLIKQLQQVNSQM-QAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEH 109

Query: 126 AELLTSVRDDISDFKTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVL 179
           A LL    DD  +F  +      G  S +  LL+E A+I  +  H+D VISQAQAT   L
Sbjct: 110 ASLL----DDFKEFDRTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATLGAL 165

Query: 180 GSQRALFGDVQGKVKVLGDKFPIIRSLLGSIR 211
             QR+ FG +  K+  +  + P + ++L +I+
Sbjct: 166 VFQRSTFGGINSKLSNVSSRLPTVNNILSAIK 197


>Medtr2g104910.1 | SNAP receptor complex protein | HC |
           chr2:45225854-45221145 | 20130731
          Length = 223

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 21/205 (10%)

Query: 13  WEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLE 72
           W+ LR +ARK+E  LD ++  Y KL         V   +   G +     +E  I+ LL 
Sbjct: 6   WDSLRNQARKLEAQLDEQMVLYRKL---------VSTKASTKGEATE-SDLESWIERLLN 55

Query: 73  KLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLTSV 132
           +L  +N  M +   S+G +  V+  L RH++I  + TQEF R++ N+ + +EHA LL   
Sbjct: 56  QLKQVNSQM-QAWVSSGGSEMVSHTLTRHQEIYQDLTQEFYRLRSNLRAKQEHASLL--- 111

Query: 133 RDDISDFKTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALF 186
            DD  +   +      G  S +  LL+ERA+I  S   +D VISQAQAT   L  QR+ F
Sbjct: 112 -DDFKELDRTRLDLEEGGGSEQQNLLKERASISRSTGQMDTVISQAQATLGALVFQRSTF 170

Query: 187 GDVQGKVKVLGDKFPIIRSLLGSIR 211
           G +  K+  +  + P + ++L +I+
Sbjct: 171 GGINSKLSNVSSRLPTVNTILSAIK 195


>Medtr4g006570.2 | SNAP receptor complex protein | HC |
           chr4:758919-749536 | 20130731
          Length = 241

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 21/199 (10%)

Query: 19  EARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDIN 78
           +ARK+E  LD ++++Y KL            G        SW      I+ L+++L  +N
Sbjct: 30  QARKLEAQLDEQMNAYRKL----VSTNLSTKGDAAQSDVESW------IERLIKQLQQVN 79

Query: 79  DSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLTSVRDDISD 138
             M +   S+G +  V+  L RH++IL + TQEF R++ ++ + +EHA LL    DD  +
Sbjct: 80  SQM-QAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL----DDFKE 134

Query: 139 FKTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALFGDVQGK 192
           F  +      G  S +  LL+E A+I  +  H+D VISQAQAT   L  QR+ FG +  K
Sbjct: 135 FDRTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSK 194

Query: 193 VKVLGDKFPIIRSLLGSIR 211
           +  +  + P + ++L +I+
Sbjct: 195 LSNVSSRLPTVNNILSAIK 213


>Medtr4g006570.6 | SNAP receptor complex protein | HC |
           chr4:758919-749536 | 20130731
          Length = 250

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 21/199 (10%)

Query: 19  EARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDIN 78
           +ARK+E  LD ++++Y KL            G        SW      I+ L+++L  +N
Sbjct: 39  QARKLEAQLDEQMNAYRKL----VSTNLSTKGDAAQSDVESW------IERLIKQLQQVN 88

Query: 79  DSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLTSVRDDISD 138
             M +   S+G +  V+  L RH++IL + TQEF R++ ++ + +EHA LL    DD  +
Sbjct: 89  SQM-QAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL----DDFKE 143

Query: 139 FKTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALFGDVQGK 192
           F  +      G  S +  LL+E A+I  +  H+D VISQAQAT   L  QR+ FG +  K
Sbjct: 144 FDRTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSK 203

Query: 193 VKVLGDKFPIIRSLLGSIR 211
           +  +  + P + ++L +I+
Sbjct: 204 LSNVSSRLPTVNNILSAIK 222


>Medtr4g006570.1 | SNAP receptor complex protein | HC |
           chr4:758698-749919 | 20130731
          Length = 255

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 21/199 (10%)

Query: 19  EARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDIN 78
           +ARK+E  LD ++++Y KL            G        SW      I+ L+++L  +N
Sbjct: 44  QARKLEAQLDEQMNAYRKL----VSTNLSTKGDAAQSDVESW------IERLIKQLQQVN 93

Query: 79  DSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLTSVRDDISD 138
             M +   S+G +  V+  L RH++IL + TQEF R++ ++ + +EHA LL    DD  +
Sbjct: 94  SQM-QAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLL----DDFKE 148

Query: 139 FKTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALFGDVQGK 192
           F  +      G  S +  LL+E A+I  +  H+D VISQAQAT   L  QR+ FG +  K
Sbjct: 149 FDRTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSK 208

Query: 193 VKVLGDKFPIIRSLLGSIR 211
           +  +  + P + ++L +I+
Sbjct: 209 LSNVSSRLPTVNNILSAIK 227


>Medtr2g104910.2 | SNAP receptor complex protein | HC |
           chr2:45223920-45221145 | 20130731
          Length = 212

 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 21/198 (10%)

Query: 20  ARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKSMEMEIQSLLEKLLDIND 79
           ARK+E  LD ++  Y KL +  T+      G        SW      I+ LL +L  +N 
Sbjct: 2   ARKLEAQLDEQMVLYRKLVS--TKAS--TKGEATESDLESW------IERLLNQLKQVNS 51

Query: 80  SMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMREHAELLTSVRDDISDF 139
            M +   S+G +  V+  L RH++I  + TQEF R++ N+ + +EHA LL    DD  + 
Sbjct: 52  QM-QAWVSSGGSEMVSHTLTRHQEIYQDLTQEFYRLRSNLRAKQEHASLL----DDFKEL 106

Query: 140 KTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQRALFGDVQGKV 193
             +      G  S +  LL+ERA+I  S   +D VISQAQAT   L  QR+ FG +  K+
Sbjct: 107 DRTRLDLEEGGGSEQQNLLKERASISRSTGQMDTVISQAQATLGALVFQRSTFGGINSKL 166

Query: 194 KVLGDKFPIIRSLLGSIR 211
             +  + P + ++L +I+
Sbjct: 167 SNVSSRLPTVNTILSAIK 184


>Medtr4g006570.4 | SNAP receptor complex protein | HC |
           chr4:753529-749619 | 20130731
          Length = 200

 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 11/155 (7%)

Query: 63  MEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSM 122
           +E  I+ L+++L  +N  M +   S+G +  V+  L RH++IL + TQEF R++ ++ + 
Sbjct: 23  VESWIERLIKQLQQVNSQM-QAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAK 81

Query: 123 REHAELLTSVRDDISDFKTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATR 176
           +EHA LL    DD  +F  +      G  S +  LL+E A+I  +  H+D VISQAQAT 
Sbjct: 82  QEHASLL----DDFKEFDRTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATL 137

Query: 177 SVLGSQRALFGDVQGKVKVLGDKFPIIRSLLGSIR 211
             L  QR+ FG +  K+  +  + P + ++L +I+
Sbjct: 138 GALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIK 172


>Medtr4g006570.5 | SNAP receptor complex protein | HC |
           chr4:758919-749536 | 20130731
          Length = 200

 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 89/155 (57%), Gaps = 11/155 (7%)

Query: 63  MEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSM 122
           +E  I+ L+++L  +N  M +   S+G +  V+  L RH++IL + TQEF R++ ++ + 
Sbjct: 23  VESWIERLIKQLQQVNSQM-QAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAK 81

Query: 123 REHAELLTSVRDDISDFKTS------GSMSPRMQLLRERAAIHGSISHIDDVISQAQATR 176
           +EHA LL    DD  +F  +      G  S +  LL+E A+I  +  H+D VISQAQAT 
Sbjct: 82  QEHASLL----DDFKEFDRTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATL 137

Query: 177 SVLGSQRALFGDVQGKVKVLGDKFPIIRSLLGSIR 211
             L  QR+ FG +  K+  +  + P + ++L +I+
Sbjct: 138 GALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIK 172