Miyakogusa Predicted Gene
- Lj0g3v0153289.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0153289.1 tr|E5GCA5|E5GCA5_CUCME Cytochrome p450 OS=Cucumis
melo subsp. melo PE=3 SV=1,34.46,2e-19,PRENYLATED RAB ACCEPTOR
1-RELATED,NULL; seg,NULL; PRA1,Prenylated rab acceptor
PRA1,CUFF.9483.1
(183 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g031070.1 | PRA1 family protein | LC | chr3:26884581-26883... 108 3e-24
Medtr0562s0010.1 | PRA1 (prenylated RAB acceptor) family protein... 88 5e-18
Medtr4g014060.1 | PRA1 (prenylated RAB acceptor) family protein ... 88 5e-18
Medtr5g083490.1 | PRA1 (prenylated RAB acceptor) family protein ... 87 8e-18
Medtr5g083490.2 | PRA1 (prenylated RAB acceptor) family protein ... 87 8e-18
Medtr2g100270.1 | PRA1 (prenylated RAB acceptor) family protein ... 48 6e-06
>Medtr3g031070.1 | PRA1 family protein | LC | chr3:26884581-26883975
| 20130731
Length = 197
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 72/155 (46%)
Query: 22 WTELIDRSAISLPESPSEAISRLRKNVLHFRVNYXXXXXXXXXXXXXXXXXXXXXXXCLA 81
WTELIDRS IS+PES +EA R+RKN+ +FR+NY LA
Sbjct: 31 WTELIDRSTISIPESLTEAFFRIRKNIYYFRINYIIVLTLVLAAFLLSRPLSLLLLISLA 90
Query: 82 GAWIFLYGLRPPEQKLVGFHRALTNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 141
GAW+FLY LR PE+KLV R + E
Sbjct: 91 GAWLFLYILRAPEKKLVILDRVFSKNELLVVLIVATVVVVVVTSIVSVIVYAVMVGVGIV 150
Query: 142 CVHGALRVPDDLFLEEQVSWPLTFGLFPFAGNGPN 176
C HGA+ VP+DLFLE+Q W FGLFP NG
Sbjct: 151 CAHGAICVPEDLFLEQQEPWSWYFGLFPLVENGSK 185
>Medtr0562s0010.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | scaffold0562:30-710 | 20130731
Length = 226
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 60/138 (43%)
Query: 21 PWTELIDRSAISLPESPSEAISRLRKNVLHFRVNYXXXXXXXXXXXXXXXXXXXXXXXCL 80
PWTEL+DRSA S PES S+A R+RKN +FRVNY L
Sbjct: 61 PWTELVDRSAFSKPESFSDATLRVRKNYSYFRVNYYAVVAGILAVSLLTNPFSLILLIGL 120
Query: 81 AGAWIFLYGLRPPEQKLVGFHRALTNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 140
+W FLY RP ++ LV F R T+ E
Sbjct: 121 LASWTFLYLFRPTDRPLVLFGRTFTDFETLMILSGLTIFVVFLTSVGSVLVSALMLGVSV 180
Query: 141 XCVHGALRVPDDLFLEEQ 158
C+HGA R P+DLFL+EQ
Sbjct: 181 VCLHGAFRAPEDLFLDEQ 198
>Medtr4g014060.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr4:3898587-3900131 | 20130731
Length = 226
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 60/138 (43%)
Query: 21 PWTELIDRSAISLPESPSEAISRLRKNVLHFRVNYXXXXXXXXXXXXXXXXXXXXXXXCL 80
PWTEL+DRSA S PES S+A R+RKN +FRVNY L
Sbjct: 61 PWTELVDRSAFSKPESFSDATLRVRKNYSYFRVNYYAVVAGILAVSLLTNPFSLILLIGL 120
Query: 81 AGAWIFLYGLRPPEQKLVGFHRALTNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 140
+W FLY RP ++ LV F R T+ E
Sbjct: 121 LASWTFLYLFRPTDRPLVLFGRTFTDFETLMILSGLTIFVVFLTSVGSVLVSALMLGVSV 180
Query: 141 XCVHGALRVPDDLFLEEQ 158
C+HGA R P+DLFL+EQ
Sbjct: 181 VCLHGAFRAPEDLFLDEQ 198
>Medtr5g083490.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr5:36034293-36033649 | 20130731
Length = 214
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 61/138 (44%)
Query: 21 PWTELIDRSAISLPESPSEAISRLRKNVLHFRVNYXXXXXXXXXXXXXXXXXXXXXXXCL 80
PW+ELIDRS+IS PE+ +EA SR+RKN +FRVNY L
Sbjct: 53 PWSELIDRSSISRPETLAEAYSRIRKNFTYFRVNYLTLIIFALAVSLITHPFSLLVLLGL 112
Query: 81 AGAWIFLYGLRPPEQKLVGFHRALTNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 140
+W FLY RP +Q LV F R +RE
Sbjct: 113 LASWSFLYLFRPSDQPLVLFGRTFADRETLGILVVLTIFVVFLTTVGSLLISALMVGLAI 172
Query: 141 XCVHGALRVPDDLFLEEQ 158
HGA RVP+DLFL++Q
Sbjct: 173 VSAHGAFRVPEDLFLDDQ 190
>Medtr5g083490.2 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr5:36034293-36033649 | 20130731
Length = 214
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 61/138 (44%)
Query: 21 PWTELIDRSAISLPESPSEAISRLRKNVLHFRVNYXXXXXXXXXXXXXXXXXXXXXXXCL 80
PW+ELIDRS+IS PE+ +EA SR+RKN +FRVNY L
Sbjct: 53 PWSELIDRSSISRPETLAEAYSRIRKNFTYFRVNYLTLIIFALAVSLITHPFSLLVLLGL 112
Query: 81 AGAWIFLYGLRPPEQKLVGFHRALTNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 140
+W FLY RP +Q LV F R +RE
Sbjct: 113 LASWSFLYLFRPSDQPLVLFGRTFADRETLGILVVLTIFVVFLTTVGSLLISALMVGLAI 172
Query: 141 XCVHGALRVPDDLFLEEQ 158
HGA RVP+DLFL++Q
Sbjct: 173 VSAHGAFRVPEDLFLDDQ 190
>Medtr2g100270.1 | PRA1 (prenylated RAB acceptor) family protein |
HC | chr2:43061479-43062573 | 20130731
Length = 185
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Query: 21 PWTELIDRSAISLPESPSEAISRLRKNVLHFRVNYXXXXXXXXXXXXXXXXXXXXXXXCL 80
PW L++ + +LP + +AISR++ N+ F++NY L
Sbjct: 37 PWKLLVNLRSFNLPSNFHDAISRIKTNISFFQMNYAIILLIILFLSLLWHPISLIVFVVL 96
Query: 81 AGAWIFLYGLRPPEQKLVGFHRALTNREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 140
AW+FLY LR ++ +V F R +++R
Sbjct: 97 IAAWLFLYFLR--DEPIVIFGRLISDRVILVLMLILTVGLLLLTGAILNILIAVAVGVVV 154
Query: 141 XCVHGALRVPDDLFLEEQ 158
+H A R DLFL+E+
Sbjct: 155 ILLHAAFRNTSDLFLDEE 172