Miyakogusa Predicted Gene

Lj0g3v0152929.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0152929.2 Non Characterized Hit- tr|I1MP06|I1MP06_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.11,0,SUBFAMILY NOT
NAMED,NULL; CHAPERONE-ACTIVITY OF BC1 COMPLEX
(CABC1)-RELATED,NULL,CUFF.9449.2
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g038750.1 | unusual kinase, putative | HC | chr6:13909094-...   267   3e-72
Medtr0053s0030.1 | ubiquinone biosynthesis protein UbiB | HC | s...   104   4e-23
Medtr0053s0030.3 | ubiquinone biosynthesis protein UbiB | HC | s...   104   4e-23
Medtr0053s0030.2 | ubiquinone biosynthesis protein UbiB | HC | s...   104   4e-23
Medtr4g026450.1 | ubiquinone biosynthesis protein UbiB | HC | ch...   103   8e-23
Medtr4g026450.2 | ubiquinone biosynthesis protein UbiB | HC | ch...   103   8e-23
Medtr1g046620.1 | ABC1/COQ8 Serine/Threonine kinase | HC | chr1:...    91   7e-19
Medtr1g009860.2 | Serine/Threonine kinase, ABC1 family protein |...    78   4e-15
Medtr1g009860.1 | Serine/Threonine kinase, ABC1 family protein |...    78   5e-15
Medtr3g105760.1 | AarF domain kinase | HC | chr3:48788653-487798...    67   1e-11
Medtr1g095480.2 | AarF domain kinase | HC | chr1:42937529-429448...    65   3e-11
Medtr0224s0030.1 | ubiquinone biosynthesis protein coq-8, putati...    63   1e-10
Medtr1g095480.1 | AarF domain kinase | HC | chr1:42937463-429478...    63   2e-10

>Medtr6g038750.1 | unusual kinase, putative | HC |
           chr6:13909094-13897784 | 20130731
          Length = 710

 Score =  267 bits (683), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 135/159 (84%), Positives = 144/159 (90%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           YKFKFRIPSYFSLVIRSLAVLEGIAI  NP+YKVLGSTYPWIARKVLTDSSPQL+SSLEN
Sbjct: 452 YKFKFRIPSYFSLVIRSLAVLEGIAIGFNPDYKVLGSTYPWIARKVLTDSSPQLRSSLEN 511

Query: 68  LLYEDGVFRIDRLESLLAESLRAKTEKALVKQQSEGTDSRLVMKEILSFTLTEKGEYVRG 127
           LLY+DGVF IDRLESLL ESLRAKT+K LVK  SEG DS++VMKE+LSFTLTEKG +VR 
Sbjct: 512 LLYKDGVFDIDRLESLLTESLRAKTDKTLVKIPSEGADSKMVMKEVLSFTLTEKGGFVRK 571

Query: 128 IIVQEFAKGLDALGLATLETAFARVPFSAFVFPSLMTEE 166
           IIVQEFAKGLDALGLA+LETA ARVPFS F F  LMTEE
Sbjct: 572 IIVQEFAKGLDALGLASLETAAARVPFSNFFFSPLMTEE 610


>Medtr0053s0030.1 | ubiquinone biosynthesis protein UbiB | HC |
           scaffold0053:15781-25812 | 20130731
          Length = 701

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 94/148 (63%), Gaps = 15/148 (10%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y+F F +P+Y++L++RSL VLEG+A++++P +KVL ++YP+ A+++LTD +P L+ +L  
Sbjct: 472 YQFPFNVPAYYALILRSLTVLEGLALNADPNFKVLAASYPYFAKRLLTDPNPYLRDALIE 531

Query: 68  LLYEDGVFRIDRLESLLAESLRAKTEKALVKQQSEGTD--SRLVMKEILSFTLTEKGEYV 125
           LL++DG FR  RLE LL              Q S  +D  ++  ++ +L   L+  GE +
Sbjct: 532 LLFKDGKFRWSRLEDLLV-------------QGSMDSDFSAKEALQPVLKVLLSPDGEVI 578

Query: 126 RGIIVQEFAKGLDALGLATLETAFARVP 153
           R ++++E  +  +A  L+++  ++  VP
Sbjct: 579 RTLVIKEAVRVSEAFTLSSISDSYKSVP 606


>Medtr0053s0030.3 | ubiquinone biosynthesis protein UbiB | HC |
           scaffold0053:15781-25801 | 20130731
          Length = 701

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 94/148 (63%), Gaps = 15/148 (10%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y+F F +P+Y++L++RSL VLEG+A++++P +KVL ++YP+ A+++LTD +P L+ +L  
Sbjct: 472 YQFPFNVPAYYALILRSLTVLEGLALNADPNFKVLAASYPYFAKRLLTDPNPYLRDALIE 531

Query: 68  LLYEDGVFRIDRLESLLAESLRAKTEKALVKQQSEGTD--SRLVMKEILSFTLTEKGEYV 125
           LL++DG FR  RLE LL              Q S  +D  ++  ++ +L   L+  GE +
Sbjct: 532 LLFKDGKFRWSRLEDLLV-------------QGSMDSDFSAKEALQPVLKVLLSPDGEVI 578

Query: 126 RGIIVQEFAKGLDALGLATLETAFARVP 153
           R ++++E  +  +A  L+++  ++  VP
Sbjct: 579 RTLVIKEAVRVSEAFTLSSISDSYKSVP 606


>Medtr0053s0030.2 | ubiquinone biosynthesis protein UbiB | HC |
           scaffold0053:15781-25812 | 20130731
          Length = 701

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 94/148 (63%), Gaps = 15/148 (10%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y+F F +P+Y++L++RSL VLEG+A++++P +KVL ++YP+ A+++LTD +P L+ +L  
Sbjct: 472 YQFPFNVPAYYALILRSLTVLEGLALNADPNFKVLAASYPYFAKRLLTDPNPYLRDALIE 531

Query: 68  LLYEDGVFRIDRLESLLAESLRAKTEKALVKQQSEGTD--SRLVMKEILSFTLTEKGEYV 125
           LL++DG FR  RLE LL              Q S  +D  ++  ++ +L   L+  GE +
Sbjct: 532 LLFKDGKFRWSRLEDLLV-------------QGSMDSDFSAKEALQPVLKVLLSPDGEVI 578

Query: 126 RGIIVQEFAKGLDALGLATLETAFARVP 153
           R ++++E  +  +A  L+++  ++  VP
Sbjct: 579 RTLVIKEAVRVSEAFTLSSISDSYKSVP 606


>Medtr4g026450.1 | ubiquinone biosynthesis protein UbiB | HC |
           chr4:9084432-9077832 | 20130731
          Length = 713

 Score =  103 bits (257), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 92/146 (63%), Gaps = 11/146 (7%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y++ F +P+Y++L++RSL VLEG+A+ ++P +KVL ++YP+ A+++LTD +P L+ +L  
Sbjct: 484 YEYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALIE 543

Query: 68  LLYEDGVFRIDRLESLLAESLRAKTEKALVKQQSEGTDSRLVMKEILSFTLTEKGEYVRG 127
           LL++DG FR +RLE+LL +  + +   A           +  ++ +L   L+  GE +R 
Sbjct: 544 LLFKDGKFRWNRLENLLVQGKKDRDFSA-----------KEALQPVLKVLLSPDGEVLRN 592

Query: 128 IIVQEFAKGLDALGLATLETAFARVP 153
           ++++E  +  +A  L T+   +  VP
Sbjct: 593 LVIKEAIRVSEAFTLGTISETYRYVP 618


>Medtr4g026450.2 | ubiquinone biosynthesis protein UbiB | HC |
           chr4:9084529-9077818 | 20130731
          Length = 713

 Score =  103 bits (257), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 92/146 (63%), Gaps = 11/146 (7%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y++ F +P+Y++L++RSL VLEG+A+ ++P +KVL ++YP+ A+++LTD +P L+ +L  
Sbjct: 484 YEYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALIE 543

Query: 68  LLYEDGVFRIDRLESLLAESLRAKTEKALVKQQSEGTDSRLVMKEILSFTLTEKGEYVRG 127
           LL++DG FR +RLE+LL +  + +   A           +  ++ +L   L+  GE +R 
Sbjct: 544 LLFKDGKFRWNRLENLLVQGKKDRDFSA-----------KEALQPVLKVLLSPDGEVLRN 592

Query: 128 IIVQEFAKGLDALGLATLETAFARVP 153
           ++++E  +  +A  L T+   +  VP
Sbjct: 593 LVIKEAIRVSEAFTLGTISETYRYVP 618


>Medtr1g046620.1 | ABC1/COQ8 Serine/Threonine kinase | HC |
           chr1:17578540-17568987 | 20130731
          Length = 784

 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 52/207 (25%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           + + FRIP YF+L+IR++ VLEGIA+  NP++ ++   YP+IA+++LTD SP+L+S+L  
Sbjct: 512 FDYPFRIPPYFALIIRAIGVLEGIALVGNPDFAIVDEAYPYIAQRLLTDESPRLRSALRY 571

Query: 68  LLY-EDGVFRIDRLESLL--------------AESLRAKTE----------------KAL 96
            +Y + GVF  +R   ++               E L+                    +++
Sbjct: 572 TIYGKSGVFDAERFIDVMQAFENFITAAKSGGGEDLKGSMAELGIMTNRSEYLLPGFQSV 631

Query: 97  VKQQSEGTDSRLVMKEILSFTLTEKGEYVRGIIVQEFAKGLDA------------LGLAT 144
             QQ +  ++R      L+F L++KG + R  ++ E  KG+DA            LG+  
Sbjct: 632 TPQQPQPVETRAA----LAFLLSDKGNFFREFLLDEIVKGIDAVTREQMVRIMSLLGVQN 687

Query: 145 LETAFARVPF-----SAFVFPSLMTEE 166
               FA VP       A + P++  E+
Sbjct: 688 ASPIFAMVPTIGRFKPAALIPTITEED 714


>Medtr1g009860.2 | Serine/Threonine kinase, ABC1 family protein | HC
           | chr1:1566166-1556950 | 20130731
          Length = 616

 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 53/77 (68%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y +  RIP  FSLVIRSL   EGI  +  P++K L   YP++A+++LTD +P L+  L  
Sbjct: 464 YNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLVQ 523

Query: 68  LLYEDGVFRIDRLESLL 84
           +L++DG+F+  RLE+L+
Sbjct: 524 VLFKDGLFQWKRLENLI 540


>Medtr1g009860.1 | Serine/Threonine kinase, ABC1 family protein | HC
           | chr1:1566166-1556922 | 20130731
          Length = 654

 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 53/77 (68%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y +  RIP  FSLVIRSL   EGI  +  P++K L   YP++A+++LTD +P L+  L  
Sbjct: 464 YNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLVQ 523

Query: 68  LLYEDGVFRIDRLESLL 84
           +L++DG+F+  RLE+L+
Sbjct: 524 VLFKDGLFQWKRLENLI 540


>Medtr3g105760.1 | AarF domain kinase | HC | chr3:48788653-48779840
           | 20130731
          Length = 699

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 30/152 (19%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           Y+F F +P  ++LVIR+L  LEG A   +P++KV+ S YP++  +++ D SP ++  L  
Sbjct: 462 YEFNFSLPPDYALVIRALGSLEGTAKVLDPDFKVIESAYPFVIGRLIADPSPDMRRILRE 521

Query: 68  L-LYEDGVFRIDRLESLLAESLRAKTEKALVKQQSEGT-----------------DSRLV 109
           L +  +G  R +RLE L+A         A+ +Q SE T                 D   V
Sbjct: 522 LVICNNGSIRWNRLERLVA---------AISEQASELTEDPNPEKFSSPSVWKSFDMHAV 572

Query: 110 M---KEILSFTLTEKGEYVRGIIVQEFAKGLD 138
           +   +++L F L+ KG+ VR  ++++  +  D
Sbjct: 573 VDSTEDLLLFILSVKGQRVRVFLLRDIVEAAD 604


>Medtr1g095480.2 | AarF domain kinase | HC | chr1:42937529-42944851
           | 20130731
          Length = 614

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 48/63 (76%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           +K+ FR+P+Y++LV+RSLA  EG+AI+++ ++K   + YP++ RK+LT++S   +  L +
Sbjct: 544 FKYHFRMPAYYTLVLRSLASFEGLAIAADKKFKTFEAAYPYVVRKLLTENSAATRKILHS 603

Query: 68  LLY 70
           +LY
Sbjct: 604 VLY 606


>Medtr0224s0030.1 | ubiquinone biosynthesis protein coq-8, putative
           | HC | scaffold0224:28250-24708 | 20130731
          Length = 294

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 47/62 (75%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           +K+ FR+P+Y++LV+RSLA  EG+AI+++ ++K   + YP++ RK+LT++S   +  L +
Sbjct: 160 FKYHFRMPAYYTLVLRSLASFEGLAIAADKKFKTFEAAYPYVVRKLLTENSAATRKILHS 219

Query: 68  LL 69
           +L
Sbjct: 220 VL 221


>Medtr1g095480.1 | AarF domain kinase | HC | chr1:42937463-42947824
           | 20130731
          Length = 824

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 47/62 (75%)

Query: 8   YKFKFRIPSYFSLVIRSLAVLEGIAISSNPEYKVLGSTYPWIARKVLTDSSPQLKSSLEN 67
           +K+ FR+P+Y++LV+RSLA  EG+AI+++ ++K   + YP++ RK+LT++S   +  L +
Sbjct: 544 FKYHFRMPAYYTLVLRSLASFEGLAIAADKKFKTFEAAYPYVVRKLLTENSAATRKILHS 603

Query: 68  LL 69
           +L
Sbjct: 604 VL 605