Miyakogusa Predicted Gene

Lj0g3v0151919.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151919.2 CUFF.9361.2
         (64 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g089730.1 | F-box plant-like protein | LC | chr7:35146477-...    86   6e-18
Medtr7g089640.1 | F-box plant-like protein | HC | chr7:35109328-...    73   5e-14
Medtr5g089110.1 | F-box plant-like protein | HC | chr5:38730456-...    65   2e-11
Medtr5g089110.2 | F-box plant-like protein | HC | chr5:38730456-...    64   2e-11
Medtr3g436860.2 | F-box plant-like protein | HC | chr3:12403405-...    64   4e-11
Medtr3g436860.3 | F-box plant-like protein | HC | chr3:12402988-...    64   4e-11
Medtr3g436860.1 | F-box plant-like protein | HC | chr3:12403625-...    64   5e-11
Medtr7g089670.1 | F-box plant-like protein | HC | chr7:35123687-...    52   1e-07

>Medtr7g089730.1 | F-box plant-like protein | LC |
           chr7:35146477-35144993 | 20130731
          Length = 314

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 1   MGRNIGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLD 60
           +G  I W+KLR S VET  CVR+VSDC +DLK GDHIEIQ +   +T YDWWYAVIGHLD
Sbjct: 181 VGNKIHWDKLRPSLVETSSCVRHVSDCYQDLKLGDHIEIQWRGNTQTPYDWWYAVIGHLD 240

Query: 61  S 61
           S
Sbjct: 241 S 241


>Medtr7g089640.1 | F-box plant-like protein | HC |
           chr7:35109328-35106604 | 20130731
          Length = 394

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/58 (53%), Positives = 43/58 (74%)

Query: 4   NIGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS 61
           NI WE+LR   +++   V ++SDCL+DLKPGDH+EIQ +   E  Y WWY+VIGHL++
Sbjct: 262 NIKWERLRVPPIDSSSHVLHISDCLDDLKPGDHVEIQWRRNNEFPYGWWYSVIGHLET 319


>Medtr5g089110.1 | F-box plant-like protein | HC |
           chr5:38730456-38725757 | 20130731
          Length = 399

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 39/57 (68%)

Query: 5   IGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS 61
           I WE+LR   V+TPP   ++++CL DL  GDHIEIQ +   +  Y WWY ++GHL+S
Sbjct: 268 IPWERLRAPPVDTPPHDLHITECLHDLHAGDHIEIQWRRNKDFPYGWWYGIVGHLES 324


>Medtr5g089110.2 | F-box plant-like protein | HC |
           chr5:38730456-38725757 | 20130731
          Length = 347

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 39/57 (68%)

Query: 5   IGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS 61
           I WE+LR   V+TPP   ++++CL DL  GDHIEIQ +   +  Y WWY ++GHL+S
Sbjct: 268 IPWERLRAPPVDTPPHDLHITECLHDLHAGDHIEIQWRRNKDFPYGWWYGIVGHLES 324


>Medtr3g436860.2 | F-box plant-like protein | HC |
           chr3:12403405-12408412 | 20130731
          Length = 378

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 38/57 (66%)

Query: 5   IGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS 61
           I WE++R   V+  P   ++S+CL DL PG+HIEIQ +   E  Y WWY V+GHL+S
Sbjct: 269 IPWERIRAPPVDISPHDLHISNCLNDLHPGNHIEIQWRRKKEFPYGWWYGVVGHLES 325


>Medtr3g436860.3 | F-box plant-like protein | HC |
           chr3:12402988-12406347 | 20130731
          Length = 378

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 38/57 (66%)

Query: 5   IGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS 61
           I WE++R   V+  P   ++S+CL DL PG+HIEIQ +   E  Y WWY V+GHL+S
Sbjct: 269 IPWERIRAPPVDISPHDLHISNCLNDLHPGNHIEIQWRRKKEFPYGWWYGVVGHLES 325


>Medtr3g436860.1 | F-box plant-like protein | HC |
           chr3:12403625-12408078 | 20130731
          Length = 335

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 38/57 (66%)

Query: 5   IGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS 61
           I WE++R   V+  P   ++S+CL DL PG+HIEIQ +   E  Y WWY V+GHL+S
Sbjct: 204 IPWERIRAPPVDISPHDLHISNCLNDLHPGNHIEIQWRRKKEFPYGWWYGVVGHLES 260


>Medtr7g089670.1 | F-box plant-like protein | HC |
           chr7:35123687-35121860 | 20130731
          Length = 318

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query: 4   NIGWEKLRRSSVETPPCVRYVSDCLEDLKPGDHIEIQCKLMVETHYDWWYAVIGHLDS 61
           ++ W+ LR    +T     Y  + + +LKPGD++E+Q +   E  YDWW+A+IGHL+S
Sbjct: 183 DVEWDMLRIPPPQTFLSDYYKPNYINNLKPGDYVEVQKRRRKEYPYDWWFAIIGHLES 240