Miyakogusa Predicted Gene
- Lj0g3v0151899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0151899.1 Non Characterized Hit- tr|I1KMJ2|I1KMJ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2557
PE=,49.43,0.0000000001, ,CUFF.9357.1
(122 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g089340.1 | CRT (chloroquine-resistance transporter)-like ... 59 9e-10
Medtr5g089340.3 | CRT (chloroquine-resistance transporter)-like ... 58 2e-09
Medtr3g099780.1 | CRT (chloroquine-resistance transporter)-like ... 53 6e-08
Medtr0028s0090.1 | CRT (chloroquine-resistance transporter)-like... 53 7e-08
Medtr0028s0090.2 | CRT (chloroquine-resistance transporter)-like... 52 9e-08
>Medtr5g089340.1 | CRT (chloroquine-resistance transporter)-like
transporter, putative | HC | chr5:38832701-38826925 |
20130731
Length = 437
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
Query: 51 TGNGRESLNQTAAVTVVMGVGNRVMYKLALVPLKQYPFFLAQTGT-----LYLGHHLMLH 105
+GN + AA TVVMGVGNRV+YKLALVPLKQYPFFLAQ T +Y G + H
Sbjct: 89 SGNKAAEVAVAAAATVVMGVGNRVLYKLALVPLKQYPFFLAQLSTFGYVIVYFGIMYIRH 148
Query: 106 KPAV 109
+ +
Sbjct: 149 RAGI 152
>Medtr5g089340.3 | CRT (chloroquine-resistance transporter)-like
transporter, putative | HC | chr5:38832701-38826925 |
20130731
Length = 336
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 50 ETGNGRESLNQTAAVTVVMGVGNRVMYKLALVPLKQYPFFLAQTGT-----LYLGHHLML 104
+GN + AA TVVMGVGNRV+YKLALVPLKQYPFFLAQ T +Y G +
Sbjct: 88 RSGNKAAEVAVAAAATVVMGVGNRVLYKLALVPLKQYPFFLAQLSTFGYVIVYFGIMYIR 147
Query: 105 HKPAV 109
H+ +
Sbjct: 148 HRAGI 152
>Medtr3g099780.1 | CRT (chloroquine-resistance transporter)-like
transporter, putative | HC | chr3:45782380-45789933 |
20130731
Length = 422
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 61 TAAVTVVMGVGNRVMYKLALVPLKQYPFFLAQTGTL 96
T+A TV + V NRV+YKLALVP+ YPFFLAQ T
Sbjct: 88 TSATTVSLAVANRVLYKLALVPMSNYPFFLAQLNTF 123
>Medtr0028s0090.1 | CRT (chloroquine-resistance transporter)-like
transporter, putative | HC | scaffold0028:25558-37867 |
20130731
Length = 432
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Query: 29 SSERSVEGEEEDNARPRLGELETGNGRESLNQTAAVTVVMGVG------NRVMYKLALVP 82
+ ERS EE++ R + N R+S NQT V V NRV+YKLALVP
Sbjct: 62 ARERSDVSEEDEKKR-----IVEDNCRKSENQTVKVVVAAAAVGVFGVGNRVLYKLALVP 116
Query: 83 LKQYPFFLAQTGTL 96
LKQYPFFLAQ T
Sbjct: 117 LKQYPFFLAQFSTF 130
>Medtr0028s0090.2 | CRT (chloroquine-resistance transporter)-like
transporter, putative | HC | scaffold0028:25558-37826 |
20130731
Length = 345
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 31 ERSVEGEEEDNARPRLGELETGNGRESLNQTAAVTVVMGVG------NRVMYKLALVPLK 84
ERS EE++ R + N R+S NQT V V NRV+YKLALVPLK
Sbjct: 64 ERSDVSEEDEKKR-----IVEDNCRKSENQTVKVVVAAAAVGVFGVGNRVLYKLALVPLK 118
Query: 85 QYPFFLAQTGTL 96
QYPFFLAQ T
Sbjct: 119 QYPFFLAQFSTF 130