Miyakogusa Predicted Gene

Lj0g3v0151869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151869.1 tr|A9T4N0|A9T4N0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88027
,37.8,3e-19,EF_HAND_2,EF-HAND 2; SUBFAMILY NOT NAMED,NULL; EF-HAND
CALCIUM-BINDING DOMAIN CONTAINING PROTEIN,NUL,CUFF.9354.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g024890.1 | calcium-binding EF-hand protein | HC | chr7:82...   230   3e-61
Medtr7g024880.1 | calcium-binding EF-hand protein | HC | chr7:82...   230   4e-61
Medtr7g024873.1 | calcium-binding EF-hand protein | HC | chr7:82...   225   8e-60
Medtr8g446810.1 | calcium-binding EF-hand protein | HC | chr8:18...   134   3e-32
Medtr1g081270.1 | EF-hand protein | HC | chr1:36168657-36170148 ...    86   1e-17
Medtr7g024900.1 | calcium ion-binding protein, putative | HC | c...    82   2e-16

>Medtr7g024890.1 | calcium-binding EF-hand protein | HC |
           chr7:8237131-8236498 | 20130731
          Length = 137

 Score =  230 bits (587), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 110/137 (80%), Positives = 128/137 (93%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISVCDRFALLDTNNDGLLSYEEMLKELQSLRVLETHYG 60
           MSVEILDGATIV+FLEDEEAF+ SV +RFA LDTNNDGLLSYEEMLKEL+SLR+ ETH+G
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNNDGLLSYEEMLKELRSLRIFETHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV+ +P+ELARVYESLFIQFDHNLNG++DLEEFK ET++MMLAMADGMGF+P+QMVLEE
Sbjct: 61  IDVDSDPNELARVYESLFIQFDHNLNGTIDLEEFKKETKQMMLAMADGMGFMPIQMVLEE 120

Query: 121 DSILKRAVERECNRVVA 137
           DSILK+AVE + N+V A
Sbjct: 121 DSILKKAVEIDSNKVAA 137


>Medtr7g024880.1 | calcium-binding EF-hand protein | HC |
           chr7:8233991-8233175 | 20130731
          Length = 137

 Score =  230 bits (586), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 126/137 (91%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISVCDRFALLDTNNDGLLSYEEMLKELQSLRVLETHYG 60
           MSVEILDGATIV+FLEDEEAF+ SV +RFA LDTNNDGLLSYEEMLKEL+SLRV ETH+G
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNNDGLLSYEEMLKELRSLRVFETHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV  +P+ELARVYESLF QFDHNLNG++DLEEFK ET++MMLAMADGMGF+P+QMVLE+
Sbjct: 61  IDVVSDPNELARVYESLFTQFDHNLNGTIDLEEFKKETKQMMLAMADGMGFMPIQMVLEK 120

Query: 121 DSILKRAVERECNRVVA 137
           DSILK+AVERE N V A
Sbjct: 121 DSILKKAVEREYNNVAA 137


>Medtr7g024873.1 | calcium-binding EF-hand protein | HC |
           chr7:8224031-8223374 | 20130731
          Length = 137

 Score =  225 bits (574), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 109/137 (79%), Positives = 127/137 (92%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISVCDRFALLDTNNDGLLSYEEMLKELQSLRVLETHYG 60
           MSVEILDGATIV+FLEDEEAF+ SV +RFA LDTN DGLLSY+EMLKEL+SLRV ETH+G
Sbjct: 1   MSVEILDGATIVHFLEDEEAFNSSVGNRFARLDTNKDGLLSYDEMLKELRSLRVFETHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV+ +P+ELARVYESLFIQFDHNLNG+VDLEEFK ET+++MLAMADGMGF+P+QMVLEE
Sbjct: 61  IDVDSDPNELARVYESLFIQFDHNLNGTVDLEEFKKETKQIMLAMADGMGFMPIQMVLEE 120

Query: 121 DSILKRAVERECNRVVA 137
           DSILK AVERE +++ A
Sbjct: 121 DSILKIAVERESSKLAA 137


>Medtr8g446810.1 | calcium-binding EF-hand protein | HC |
           chr8:18319909-18319217 | 20130731
          Length = 141

 Score =  134 bits (337), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/140 (46%), Positives = 101/140 (72%), Gaps = 3/140 (2%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISVCDRFALLDTNNDGLLSYEEMLKELQSLRVLETHYG 60
           M V I+DG T+ +F+ D+  F  S+ ++F  LD NNDG+LS  E+ K  +S+R++E+H+G
Sbjct: 1   MGVVIIDGTTVRDFIADDTHFTNSINEQFTSLDLNNDGVLSRAELRKAFESMRLIESHFG 60

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
           IDV   P++L R+Y+S+F  FD + +GSVD EEFK E +++MLA+ADG+G  P+QMVLE+
Sbjct: 61  IDVTTPPEQLTRLYDSVFDTFDGDGSGSVDREEFKNEMKKIMLAIADGLGSSPIQMVLED 120

Query: 121 D---SILKRAVERECNRVVA 137
           D   ++LK+A + E ++  A
Sbjct: 121 DDEMNLLKKAADLEASKNAA 140


>Medtr1g081270.1 | EF-hand protein | HC | chr1:36168657-36170148 |
           20130731
          Length = 134

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 5/131 (3%)

Query: 1   MSVEILDGATIVNFLEDEEAFDISVCDRFALLDTNNDGLLSYEEMLKELQSLRVLETHYG 60
           M+V +++  T+ +F+ D   FD  V + FA+LD N DG LS +E+         L +H  
Sbjct: 1   MNVAVVNSTTVTDFVNDTTNFDSFVKEWFAMLDANGDGNLSRDEIRGGFAWFMPLGSH-- 58

Query: 61  IDVEPNPDELARVYESLFIQFDHNLNGSVDLEEFKMETREMMLAMADGMGFLPVQMVLEE 120
                + +E+ R+ E +F +FD + N S+DL  FK    E+M A+A G+G  P+ +VLE+
Sbjct: 59  ---SQSQEEIDRILELIFTRFDEDQNDSLDLNGFKSLMTEIMNAVARGIGGSPIIVVLEK 115

Query: 121 DSILKRAVERE 131
           DS+L +AV+RE
Sbjct: 116 DSLLMKAVQRE 126


>Medtr7g024900.1 | calcium ion-binding protein, putative | HC |
          chr7:8240024-8239857 | 20130731
          Length = 55

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 47/51 (92%)

Query: 1  MSVEILDGATIVNFLEDEEAFDISVCDRFALLDTNNDGLLSYEEMLKELQS 51
          MSVEILDGATIV+FLEDEEAF+ SV ++FA LDTN DGLLSY+EMLKEL+S
Sbjct: 1  MSVEILDGATIVHFLEDEEAFNSSVGNQFARLDTNKDGLLSYDEMLKELRS 51