Miyakogusa Predicted Gene

Lj0g3v0151739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151739.1 Non Characterized Hit- tr|I1KXG4|I1KXG4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.2,0,23S RRNA
METHYLTRANSFERASE,NULL; seg,NULL; no description,NULL,CUFF.9345.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g064490.1 | 23S rRNA m2A2503 methyltransferase | HC | chr8...   352   2e-97
Medtr5g079860.1 | 23S rRNA m2A2503 methyltransferase | HC | chr5...    92   3e-19
Medtr5g005050.1 | 23S rRNA m2A2503 methyltransferase | HC | chr5...    91   6e-19
Medtr5g005050.2 | 23S rRNA m2A2503 methyltransferase | HC | chr5...    66   2e-11

>Medtr8g064490.1 | 23S rRNA m2A2503 methyltransferase | HC |
           chr8:27050679-27043455 | 20130731
          Length = 449

 Score =  352 bits (902), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 168/204 (82%), Positives = 178/204 (87%)

Query: 1   MGEPLHNIDNVIKAANIMVDGQGLQFSPRKVTVSTSGLVPQLRRFLHESNCALAVSLNAT 60
           MGEPLHNIDNVIKAA+IMV  QGL FSPRKVTVSTSGLVPQLRRFLHESNC LAVSLNAT
Sbjct: 243 MGEPLHNIDNVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLRRFLHESNCTLAVSLNAT 302

Query: 61  TNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNEDAERLIKLV 120
           T+EVRNWIMPINRKYK              K+ YKVLFEYVMLEGINDSNEDA+RLI+LV
Sbjct: 303 TDEVRNWIMPINRKYKLDLLLETLREELSFKHKYKVLFEYVMLEGINDSNEDAKRLIELV 362

Query: 121 KGIPCKINLISFNPHNGSFFRPTKDERMIEFRNTLAAAGVVVFLRLSRGDDQMAACGQLG 180
           KGIPCKINLISFNPH+GSFFRPTK+ERMIEFRN LA AG VV LR SRGDDQMAACGQLG
Sbjct: 363 KGIPCKINLISFNPHSGSFFRPTKEERMIEFRNMLAEAGCVVLLRPSRGDDQMAACGQLG 422

Query: 181 KPGTIQAPLLRVPEQFQIAVGSSA 204
           KPGT+QAP+LRVP+QFQ AVGSS 
Sbjct: 423 KPGTLQAPMLRVPQQFQTAVGSST 446


>Medtr5g079860.1 | 23S rRNA m2A2503 methyltransferase | HC |
           chr5:34153185-34158285 | 20130731
          Length = 432

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 6/182 (3%)

Query: 1   MGEPLHNIDNVIKAANIMVDGQGLQFSPRKVTVSTSGLVPQLRRF-LHESNCALAVSLNA 59
           MGEP+ N+  V++A   +   + +Q   R +T+ST G+   +++   H+    LAVSL+A
Sbjct: 202 MGEPMLNLKAVLEAHRCL--NKDIQIGQRMMTISTVGVPNTIKKLATHKLQSTLAVSLHA 259

Query: 60  TTNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNEDAERLIKL 119
              ++R  I+P  + Y               + + +V FEY +L GINDS ++A  L KL
Sbjct: 260 PNQKLRETIVPSAKSYPLDALMKDCKEYFH-ETSRRVSFEYALLAGINDSVDNAVELAKL 318

Query: 120 VK--GIPCKINLISFNPHNGSFFRPTKDERMIEFRNTLAAAGVVVFLRLSRGDDQMAACG 177
           +   G    +NLI FNP  GS FR    + +  F N L ++ +   +R +RG D  AACG
Sbjct: 319 LHEYGSGYHVNLIPFNPIEGSEFRRPYRKAVQAFVNALESSKITTSVRQTRGLDANAACG 378

Query: 178 QL 179
           QL
Sbjct: 379 QL 380


>Medtr5g005050.1 | 23S rRNA m2A2503 methyltransferase | HC |
           chr5:304658-307368 | 20130731
          Length = 380

 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 7/183 (3%)

Query: 1   MGEPLHNIDNVIKAANIMVDGQGLQFSPRKVTVSTSGLVPQLRRFLHES--NCALAVSLN 58
           MGEPL+N   V+++  IM  G   Q S +++TVST G++  + + LH       LAVSL+
Sbjct: 178 MGEPLNNYSAVVESVRIM-SGSPFQLSLKRITVSTVGIIHSINK-LHNDVPGLNLAVSLH 235

Query: 59  ATTNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNEDAERLIK 118
           A   ++R  IMP  R +               K+  K+L EY+ML+G+ND  + A  L K
Sbjct: 236 APAQDIRCQIMPAARAFPLEKLMASLQEYQR-KSLQKILIEYIMLDGVNDEEQHAHLLGK 294

Query: 119 LVKGIPCKINLISFNPHNG-SFFRPTKDERMIEFRNTL-AAAGVVVFLRLSRGDDQMAAC 176
           L++     +NLI FN     S F+ T ++++ +F+  L     +   +R   G+D   AC
Sbjct: 295 LLETFEVVVNLIPFNSIGTLSQFKSTSEQKVSKFQKILRGTYNIRTTVRKQMGEDISGAC 354

Query: 177 GQL 179
           GQL
Sbjct: 355 GQL 357


>Medtr5g005050.2 | 23S rRNA m2A2503 methyltransferase | HC |
           chr5:304658-307368 | 20130731
          Length = 345

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 3/129 (2%)

Query: 53  LAVSLNATTNEVRNWIMPINRKYKXXXXXXXXXXXXXXKNNYKVLFEYVMLEGINDSNED 112
           LAVSL+A   ++R  IMP  R +               K+  K+L EY+ML+G+ND  + 
Sbjct: 195 LAVSLHAPAQDIRCQIMPAARAFPLEKLMASLQEYQR-KSLQKILIEYIMLDGVNDEEQH 253

Query: 113 AERLIKLVKGIPCKINLISFNPHNG-SFFRPTKDERMIEFRNTL-AAAGVVVFLRLSRGD 170
           A  L KL++     +NLI FN     S F+ T ++++ +F+  L     +   +R   G+
Sbjct: 254 AHLLGKLLETFEVVVNLIPFNSIGTLSQFKSTSEQKVSKFQKILRGTYNIRTTVRKQMGE 313

Query: 171 DQMAACGQL 179
           D   ACGQL
Sbjct: 314 DISGACGQL 322