Miyakogusa Predicted Gene

Lj0g3v0151539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0151539.1 Non Characterized Hit- tr|I3SQX7|I3SQX7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,7e-19,seg,NULL,CUFF.9330.1
         (157 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g105430.1 | hypothetical protein | HC | chr2:45462402-4546...   140   7e-34
Medtr6g008680.1 | hypothetical protein | HC | chr6:2381996-23841...    69   3e-12

>Medtr2g105430.1 | hypothetical protein | HC |
           chr2:45462402-45460994 | 20130731
          Length = 161

 Score =  140 bits (352), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 65/95 (68%), Positives = 80/95 (84%), Gaps = 2/95 (2%)

Query: 61  KHKLMSIWQNMVFPVRRVWLTLSSRLKSSKNGAGLLKLQDDVQTCEYSDVQVMWEILQRT 120
           K+K+M IWQ M+FPVRR+ L LS+R+   KNGAGL+KLQDDVQTC Y DVQVMWE+LQ+T
Sbjct: 64  KNKIMHIWQTMIFPVRRLCLALSTRINHRKNGAGLVKLQDDVQTCGYEDVQVMWEMLQKT 123

Query: 121 ESEVIDKCHKRKQLPFWRIFVW--SNHHEASSQSA 153
           E+E++D  HKRKQLPFWR+FV   SNH +ASSQS+
Sbjct: 124 ETELVDNHHKRKQLPFWRLFVCSNSNHTKASSQSS 158


>Medtr6g008680.1 | hypothetical protein | HC | chr6:2381996-2384133
           | 20130731
          Length = 95

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 6/83 (7%)

Query: 65  MSIWQNMVFPVRRVWLTLSSRLKSSKNGAGLLKLQDDVQTCEYSDVQVMWEILQRTES-- 122
           + +WQN++ PVRR W+++++R    K   GL KL++DV++CEY D++VMWE+L R ES  
Sbjct: 10  VELWQNIMHPVRRFWISIATRFGIRK--TGLKKLRNDVKSCEYEDIRVMWEMLNRNESLS 67

Query: 123 --EVIDKCHKRKQLPFWRIFVWS 143
                +  +K K++ + ++F W+
Sbjct: 68  EFGGGNSPNKIKKIHYLKLFKWA 90