Miyakogusa Predicted Gene

Lj0g3v0150729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150729.1 Non Characterized Hit- tr|F6I0Z6|F6I0Z6_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,62.86,7e-17,
,gene.g11481.t1.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g112680.1 | transcription factor aborted microspores-like ...    97   3e-21

>Medtr1g112680.1 | transcription factor aborted microspores-like
           protein | HC | chr1:51008905-51011549 | 20130731
          Length = 521

 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 53/54 (98%)

Query: 1   MEALNTLGMDVVHATVTSHKGLVSNVFKVEKKDSEMVEAEDVRDSLLELTRNRT 54
           M+A NTLGMDV+HATVTSHKGLVSNVFKVEKK+SE+VEAE+VRDSLLELTRN++
Sbjct: 466 MDAFNTLGMDVMHATVTSHKGLVSNVFKVEKKESEIVEAEEVRDSLLELTRNKS 519