Miyakogusa Predicted Gene

Lj0g3v0150309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150309.1 Non Characterized Hit- tr|I1KA77|I1KA77_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30198
PE,84.71,0,YbaK,YbaK/aminoacyl-tRNA synthetase-associated domain;
FAMILY NOT NAMED,NULL; seg,NULL; no descripti,CUFF.9225.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g072620.1 | YbaK/proline-tRNA ligase associated domain pro...   288   2e-78

>Medtr3g072620.1 | YbaK/proline-tRNA ligase associated domain
           protein | HC | chr3:32674759-32678924 | 20130731
          Length = 329

 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 141/167 (84%), Positives = 151/167 (90%), Gaps = 2/167 (1%)

Query: 1   MGLSKXXXXXXXXXXXIEFSKYEHPLVLTVEAQAKYVGNLGGGLSKNLFLKDKKSRFYVV 60
           MGLSK           IEFSKYEHP+VLTVEAQAKYVG+  GGLSKNLFLKDKK+RFY+V
Sbjct: 1   MGLSKEQLLHQLQELQIEFSKYEHPVVLTVEAQAKYVGS--GGLSKNLFLKDKKNRFYIV 58

Query: 61  SALADTRVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGCVTPFALVNESARDVSLLL 120
           SALA+T+VDLKVLSQRLGLGKGGLRMAPEEALGE+LQVPLGCVTPFA+VNESARDVSLLL
Sbjct: 59  SALAETKVDLKVLSQRLGLGKGGLRMAPEEALGELLQVPLGCVTPFAVVNESARDVSLLL 118

Query: 121 DQGFKTHEHCFFHPLSNDMSISLNARDLDRFLKSIGRDPSYVDLEAS 167
           DQGFKT EHCFFHPLSNDMSISLN R LD+FLKSIGRDPSYVDLEA+
Sbjct: 119 DQGFKTQEHCFFHPLSNDMSISLNVRGLDKFLKSIGRDPSYVDLEAN 165