Miyakogusa Predicted Gene

Lj0g3v0150239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150239.1 Non Characterized Hit- tr|F0IAR1|F0IAR1_STRSA
Putative uncharacterized protein OS=Streptococcus
sang,29.67,0.36,DUF4370,Protein of unknown function
DUF4370,CUFF.9233.1
         (177 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g019810.1 | succinate dehydrogenase | HC | chr1:6042433-60...   308   2e-84
Medtr1g019810.2 | succinate dehydrogenase | HC | chr1:6042412-60...   276   6e-75

>Medtr1g019810.1 | succinate dehydrogenase | HC |
           chr1:6042433-6038750 | 20130731
          Length = 238

 Score =  308 bits (788), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 139/176 (78%), Positives = 164/176 (93%)

Query: 2   GLGSMRFYSQDVSHMPDIKDSDLYNAFKDLMAENWSDLSDSLVNDVKSALSKSTDDKTGK 61
           G+GSMRFYS++V+HMPDIKD +LY+ FKDL+AENWSDLSD++V+D K ALSKST+D+ GK
Sbjct: 63  GIGSMRFYSEEVTHMPDIKDPELYSVFKDLLAENWSDLSDAVVSDAKHALSKSTEDEAGK 122

Query: 62  EAVENMFRAAQAVEEFGGMLTSLKMEIDDTVGMSGENIKPLPDHMANALRVIFDRYTTYL 121
           E V N+FRAAQAVEEFGG+L +LKMEIDD++G+SGE++KPLPDHM NALR IFDRYTTYL
Sbjct: 123 EVVTNVFRAAQAVEEFGGILNTLKMEIDDSIGLSGEDVKPLPDHMQNALRTIFDRYTTYL 182

Query: 122 NSFGPEETYLQKKVETELGSKMIHLKMRCSGLGSEWGKVTVLGTSGLAGSYVDQRA 177
           N+FGP+E YL+KKVE ELG+KMIHLKMRCSGLGSEWGKVTVLGTSGLAGSYV+QRA
Sbjct: 183 NAFGPDENYLRKKVEQELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLAGSYVEQRA 238


>Medtr1g019810.2 | succinate dehydrogenase | HC |
           chr1:6042412-6038750 | 20130731
          Length = 227

 Score =  276 bits (707), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 124/165 (75%), Positives = 150/165 (90%)

Query: 2   GLGSMRFYSQDVSHMPDIKDSDLYNAFKDLMAENWSDLSDSLVNDVKSALSKSTDDKTGK 61
           G+GSMRFYS++V+HMPDIKD +LY+ FKDL+AENWSDLSD++V+D K ALSKST+D+ GK
Sbjct: 63  GIGSMRFYSEEVTHMPDIKDPELYSVFKDLLAENWSDLSDAVVSDAKHALSKSTEDEAGK 122

Query: 62  EAVENMFRAAQAVEEFGGMLTSLKMEIDDTVGMSGENIKPLPDHMANALRVIFDRYTTYL 121
           E V N+FRAAQAVEEFGG+L +LKMEIDD++G+SGE++KPLPDHM NALR IFDRYTTYL
Sbjct: 123 EVVTNVFRAAQAVEEFGGILNTLKMEIDDSIGLSGEDVKPLPDHMQNALRTIFDRYTTYL 182

Query: 122 NSFGPEETYLQKKVETELGSKMIHLKMRCSGLGSEWGKVTVLGTS 166
           N+FGP+E YL+KKVE ELG+KMIHLKMRCSGLGSEWGK+  L +S
Sbjct: 183 NAFGPDENYLRKKVEQELGTKMIHLKMRCSGLGSEWGKIVWLLSS 227