Miyakogusa Predicted Gene

Lj0g3v0150119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0150119.1 Non Characterized Hit- tr|B8B4X2|B8B4X2_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,25,0.0000004,Chaperone J-domain,Heat shock protein DnaJ,
N-terminal; DnaJ,Heat shock protein DnaJ, N-terminal; DN,CUFF.9204.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein ...   226   1e-59

>Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein |
           HC | chr3:11452614-11442856 | 20130731
          Length = 706

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 117/164 (71%), Positives = 135/164 (82%), Gaps = 5/164 (3%)

Query: 1   MARVPISQSPSTSVVST---IRAYALPLIFFAGAMFYQLVAIPNAFPPSRYDVLQIERYS 57
           M+RVP + SP  S  S    I+AYALPL+ F+ AMFYQL  IPNAFPPS YDVL+I+ YS
Sbjct: 1   MSRVPTNPSPPPSPPSMPSIIKAYALPLLLFSAAMFYQLFLIPNAFPPSHYDVLRIKMYS 60

Query: 58  SIDAVQEAYDKLESKWNSDVEVSDIHEFIKIRYAYELLTNPLWKRDYDIFGIDEQLHVVE 117
           SID V+EAY  LESKWNSDVEVSD+ EF+KIRYAYELLTNPLWKRDYD+FGIDEQLH++E
Sbjct: 61  SIDEVKEAYVNLESKWNSDVEVSDVCEFLKIRYAYELLTNPLWKRDYDLFGIDEQLHIIE 120

Query: 118 SARKRYAGKNISQLDFPLLHSPSG-SFDHSSKV-TVSDFLSAIP 159
           SA KRYAGK+IS+L+FPLLH+PS  S DHS+KV T SDF S  P
Sbjct: 121 SANKRYAGKSISELEFPLLHTPSSESIDHSTKVITASDFKSIFP 164