Miyakogusa Predicted Gene

Lj0g3v0149739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0149739.1 Non Characterized Hit- tr|I1MNZ6|I1MNZ6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,89.07,0,DUF679,Protein of unknown function DUF679; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.9172.1
         (220 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g014550.1 | transmembrane protein, putative | HC | chr2:41...   108   3e-24
Medtr2g014520.1 | transmembrane protein, putative | HC | chr2:41...   108   3e-24
Medtr4g088335.1 | transmembrane protein, putative | HC | chr4:34...   100   9e-22
Medtr4g078870.1 | DUF679 domain membrane protein | HC | chr4:305...    97   2e-20
Medtr2g020850.1 | transmembrane protein, putative | HC | chr2:70...    95   5e-20
Medtr7g010890.1 | DUF679 domain membrane protein | HC | chr7:278...    79   4e-15
Medtr5g044580.1 | DUF679 domain membrane protein | HC | chr5:195...    78   7e-15
Medtr4g118470.1 | transmembrane protein, putative | HC | chr4:49...    77   1e-14
Medtr4g118480.1 | transmembrane protein, putative | HC | chr4:49...    77   1e-14

>Medtr2g014550.1 | transmembrane protein, putative | HC |
           chr2:4179413-4178399 | 20130731
          Length = 210

 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 44  INAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFTL 103
           I++    TA L  LLPT ++LAF + +P+ T+ G C+++ + + ++ + +   SC     
Sbjct: 38  ISSTFQSTAHLANLLPTGTVLAFQLLSPIFTNVGNCDSVCKSMTSVLVTLCGASCFLLNF 97

Query: 104 TDSFRTATGRLCYGVATLRGIWTFNGGRK-KPRVPSDYRMRWGDVFHVSLSLVSFLAFAG 162
           TDS R + G +CYG AT +G+W  +G  K  P+V + YR+++ D  H  +S++ F A A 
Sbjct: 98  TDSIRDSKGNICYGFATFKGLWVIDGSTKLPPQVAAKYRIKFIDFMHAMMSILVFAAIAL 157

Query: 163 LHQDVVKCYYPGLPRKVTNTXXXXXXXX---XXXXXXXXXXKRRGIGYPF 209
             Q+VV C++P   +++                        +R GIG+P 
Sbjct: 158 FDQNVVNCFFPEPSKEIQEILTALPVAIGVFCSMLFVAFPTERHGIGFPL 207


>Medtr2g014520.1 | transmembrane protein, putative | HC |
           chr2:4168349-4167726 | 20130731
          Length = 207

 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 4/169 (2%)

Query: 44  INAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFTL 103
           I+     TA L  LLPT ++LA  + +P+ T+ G C+++++W+ A  + +   SC   + 
Sbjct: 35  ISLTFQSTAHLANLLPTGTVLALQLLSPIFTNIGSCDSVSKWMTAALVTLCGASCFLLSF 94

Query: 104 TDSFRTATGRLCYGVATLRGIWTFNGGRK-KPRVPSDYRMRWGDVFHVSLSLVSFLAFAG 162
           TDSFR + G + YG AT +G+W  +G  K  P+V + YR+R+ D  H  +S++ F A A 
Sbjct: 95  TDSFRDSKGNIIYGFATFKGLWVIDGSTKLPPQVAAKYRIRFIDFMHAVMSILVFAAIAL 154

Query: 163 LHQDVVKCYYPGLPRKVTNTXXXXXXXXX---XXXXXXXXXKRRGIGYP 208
             ++VV C++P   +++                        +R GIG+P
Sbjct: 155 FDRNVVNCFFPEPSKEIQEILTALPVAIGDFCSMLFVTFPTERHGIGFP 203


>Medtr4g088335.1 | transmembrane protein, putative | HC |
           chr4:34944124-34944744 | 20130731
          Length = 206

 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 4/169 (2%)

Query: 44  INAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFTL 103
           IN     TA L  LLPT ++L+F + +P+ T+ G+C+ + + +    L +   SC     
Sbjct: 34  INQTCKSTAHLANLLPTGTVLSFQLLSPIFTNQGKCDHVTQLMTLSLLTLCGASCFLLCF 93

Query: 104 TDSFRTATGRLCYGVATLRGIWTFNGGRKKP-RVPSDYRMRWGDVFHVSLSLVSFLAFAG 162
           TDSF+   G +CYG AT +G+W  +G    P  + + Y++R+ D  H  +S++ F A A 
Sbjct: 94  TDSFKDNKGNICYGFATFKGLWIIDGSATLPHELDAKYQLRFIDFMHAIMSILVFSAIAM 153

Query: 163 LHQDVVKCYYPGLP---RKVTNTXXXXXXXXXXXXXXXXXXKRRGIGYP 208
              +VV C++P      R++                      R GIG+P
Sbjct: 154 FDHNVVNCFFPSPSYEMRQILTALPVGIGVFCSMLFVAFPTHRHGIGFP 202


>Medtr4g078870.1 | DUF679 domain membrane protein | HC |
           chr4:30502619-30502002 | 20130731
          Length = 205

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 8/135 (5%)

Query: 44  INAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMA-IFLAILAVSCVFFT 102
           I     GTA L  LLPT ++L F   +P LT  G C+T    +M  IFL   ++SC   +
Sbjct: 32  IRKAFKGTAYLANLLPTGTVLIFQTLSPALTHRGNCHTQTSKIMTMIFLTFCSLSCFLLS 91

Query: 103 LTDSFRTATGRLCYGVATLRGIWTFNGGRKKPRVPSD----YRMRWGDVFHVSLSLVSFL 158
            TDSFR   G++ YGVATL GIW  +G   + R+P++    Y++R+ D+FH   S++ F 
Sbjct: 92  FTDSFRDERGKVRYGVATLNGIWIMDG---RIRIPAEEGVKYKLRFIDLFHACGSILVFG 148

Query: 159 AFAGLHQDVVKCYYP 173
           A A   Q VV C  P
Sbjct: 149 AIAMFDQSVVSCLAP 163


>Medtr2g020850.1 | transmembrane protein, putative | HC |
           chr2:7008821-7009816 | 20130731
          Length = 198

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 2/126 (1%)

Query: 48  LSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFTLTDSF 107
            SG   L  LLPT ++  F   +P++T++G C+T+N++L  I L I   +C F + TDS+
Sbjct: 24  FSGVGNLVKLLPTGTVFLFQYLSPVVTNNGHCSTINKYLSGILLVICGFNCAFTSFTDSY 83

Query: 108 RTATGRLCYGVATLRGIWTFNGGRKKPRVPSDYRMRWGDVFHVSLSLVSFLAFAGLHQDV 167
             + G+  YG+ T+ G+W   G        S Y++R+GD  H  LS++ F     L  +V
Sbjct: 84  TGSDGQRHYGIVTMNGLWPSPGSDSVDL--SAYKLRFGDFVHAFLSVIVFAVLGLLDTNV 141

Query: 168 VKCYYP 173
           V C+YP
Sbjct: 142 VHCFYP 147


>Medtr7g010890.1 | DUF679 domain membrane protein | HC |
           chr7:2787913-2787257 | 20130731
          Length = 218

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 3/138 (2%)

Query: 44  INAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFTL 103
           +   LS T+ L   LP+ ++L F +  P +  +G+C  ++  ++   L I A+SC FF  
Sbjct: 48  VQKTLSKTSLLGNFLPSGTLLTFEMVLPSIYRNGQCTHVHTIMIHFLLIICALSCFFFHF 107

Query: 104 TDSFRTATGRLCYGVATLRGIWTFNGGRKKPRVPSD--YRMRWGDVFHVSLSLVSFLAFA 161
           TDSF  A G + YG  T +G+  F  G     VP+D  Y++ + D  H  +S++ F+A A
Sbjct: 108 TDSFHGADGNVYYGFVTPKGLSVFKPGLAV-LVPNDDKYKVGFQDFVHAVMSVMVFVAIA 166

Query: 162 GLHQDVVKCYYPGLPRKV 179
                V  C +PG  R++
Sbjct: 167 FSDYRVSNCLFPGHEREM 184


>Medtr5g044580.1 | DUF679 domain membrane protein | HC |
           chr5:19577681-19578337 | 20130731
          Length = 218

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 3/138 (2%)

Query: 44  INAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFTL 103
           +   LS T+ L   LPT +++ F +  P +  +G+C  ++  ++   L + A+SC FF  
Sbjct: 48  VQKTLSKTSLLGNFLPTGTLITFEMVLPSIYRNGQCTHVHTIMIHFLLIMCALSCFFFHF 107

Query: 104 TDSFRTATGRLCYGVATLRGIWTFNGGRKKPRVPSD--YRMRWGDVFHVSLSLVSFLAFA 161
           TDSF  A G + YG AT  G+  F  G     VP+D  Y++ + D  H  +S++ F+A A
Sbjct: 108 TDSFHGADGNVYYGFATRNGLSVFKPGLTV-LVPNDDKYKVGFQDFVHAVMSVMVFVAIA 166

Query: 162 GLHQDVVKCYYPGLPRKV 179
                V  C +PG  +++
Sbjct: 167 FSDYRVTNCLFPGHEKEM 184


>Medtr4g118470.1 | transmembrane protein, putative | HC |
           chr4:49068993-49067880 | 20130731
          Length = 219

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 15/138 (10%)

Query: 43  VINAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFT 102
            I   + G   L  LLPT ++  F    P++T+ G C T N++L +I L I   +C F T
Sbjct: 28  TIKKSIGGIGSLIKLLPTGTVFLFQFLNPVVTNSGRCKTSNKYLSSILLVICGFNCFFST 87

Query: 103 LTDSFRTATGRLCYGVATLRGIWTFNGGRKKPRVPSD-------YRMRWGDVFHVSLSLV 155
            TDS+     +  YG+ T +G+W        P  P+        YR++  D  H +LSL+
Sbjct: 88  FTDSYTGTDKKRHYGIVTTKGLW--------PSPPASTSIDLTKYRLKGSDFVHAALSLL 139

Query: 156 SFLAFAGLHQDVVKCYYP 173
            F     L  + V C+YP
Sbjct: 140 IFALLGLLDTNTVHCFYP 157


>Medtr4g118480.1 | transmembrane protein, putative | HC |
           chr4:49075128-49076155 | 20130731
          Length = 217

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 18/175 (10%)

Query: 44  INAILSGTARLNVLLPTVSILAFSIFAPLLTDDGECNTLNRWLMAIFLAILAVSCVFFTL 103
           I   + G   L  LLPT ++  F    P++T+ G C T N++L +I L I   +C F T 
Sbjct: 27  IKKSIGGIGSLIKLLPTGTVFLFQFLNPVVTNSGRCKTSNKYLSSILLVICGFNCFFSTF 86

Query: 104 TDSFRTATGRLCYGVATLRGIWTFNGGRKKPRVPSD-------YRMRWGDVFHVSLSLVS 156
           TDS+     +  YG+ T +G+W        P  P+        YR++  D  H +LSL+ 
Sbjct: 87  TDSYTGTDKKRHYGIVTTKGLW--------PSPPASTSIDLTKYRLKGSDFVHAALSLLI 138

Query: 157 FLAFAGLHQDVVKCYYPGLP---RKVTNTXXXXXXXXXXXXXXXXXXKRRGIGYP 208
           F     L  + V C+YP      +++                      R GIGYP
Sbjct: 139 FALLGLLDTNTVHCFYPSFESTQKQLLQVLPPTIGVFVGWMFVMFPQHRHGIGYP 193