Miyakogusa Predicted Gene

Lj0g3v0149719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0149719.1 tr|G7K5I5|G7K5I5_MEDTR PttB OS=Medicago
truncatula GN=MTR_5g036060 PE=4 SV=1,70.59,5e-16, ,CUFF.9171.1
         (53 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1325s0010.1 | hypothetical protein | LC | scaffold1325:871-...    64   2e-11

>Medtr1325s0010.1 | hypothetical protein | LC |
          scaffold1325:871-1137 | 20130731
          Length = 88

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 35/42 (83%)

Query: 12 RYRFALDYDRNMARMVWDRTCMDRYPDFLKNAKKLALKQVTE 53
          +Y+F  DYD NMAR +W+RTCMDRYPD LKNA+K+AL++V  
Sbjct: 2  KYKFTSDYDCNMARSMWERTCMDRYPDHLKNARKMALREVNS 43