Miyakogusa Predicted Gene

Lj0g3v0147759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147759.1 tr|Q0J184|Q0J184_ORYSJ Os09g0457400 protein
OS=Oryza sativa subsp. japonica GN=Os09g0457400 PE=2
SV=,55.29,3e-19,seg,NULL; no description,Glycoside hydrolase,
catalytic domain; ALPHA-AMYLASE,NULL; ALPHA-AMYLASE,Gl,CUFF.9033.1
         (188 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g468990.2 | alpha amylase domain protein | HC | chr8:25017...   268   2e-72
Medtr8g468990.1 | alpha amylase domain protein | HC | chr8:25017...   268   2e-72
Medtr8g468990.3 | alpha amylase domain protein | HC | chr8:25017...   268   3e-72
Medtr7g013300.1 | alpha amylase domain protein | HC | chr7:38376...   113   8e-26
Medtr7g013300.2 | alpha amylase domain protein | HC | chr7:38376...   113   8e-26
Medtr1g019440.1 | alpha amylase domain protein | HC | chr1:58706...    91   6e-19
Medtr1g026170.1 | alpha amylase domain protein | HC | chr1:84558...    90   2e-18
Medtr1g019480.1 | alpha amylase domain protein | HC | chr1:58847...    74   9e-14

>Medtr8g468990.2 | alpha amylase domain protein | HC |
           chr8:25017934-25009440 | 20130731
          Length = 823

 Score =  268 bits (686), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 136/185 (73%), Positives = 153/185 (82%), Gaps = 4/185 (2%)

Query: 4   TEKAGEEESTSAFTDGIINEISHLVTDIXXXXXXXXXXXXAQERILQEIERLAAEAYSIF 63
           +E+AGE E+ S FT+ IINEI HLVT I            AQE ILQEIERLAAEAYSIF
Sbjct: 423 SEEAGENEN-SEFTNEIINEIRHLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIF 481

Query: 64  RSSVPTFSEETIMESEVSVEPTKLILPDTPLKVSSGTGTGYEILCQGFNWESHKSGRWYL 123
           R+SVPTFSEE I+ESEV ++      P+ P K+ SGTGTGYEI+CQGFNWES+KSGRWY+
Sbjct: 482 RTSVPTFSEEAIVESEVVLDSES---PELPPKIMSGTGTGYEIVCQGFNWESNKSGRWYM 538

Query: 124 ELKEKAAELMSLGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDVVKKFHEVG 183
           ELKEKA EL SLGFTVIWLPPPT+SVSPEGYMP+DLYNLNSRYGTIDELKDVVK+FH+VG
Sbjct: 539 ELKEKAKELASLGFTVIWLPPPTDSVSPEGYMPRDLYNLNSRYGTIDELKDVVKEFHKVG 598

Query: 184 IKVLG 188
           IKVLG
Sbjct: 599 IKVLG 603


>Medtr8g468990.1 | alpha amylase domain protein | HC |
           chr8:25017934-25009440 | 20130731
          Length = 913

 Score =  268 bits (685), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 136/185 (73%), Positives = 153/185 (82%), Gaps = 4/185 (2%)

Query: 4   TEKAGEEESTSAFTDGIINEISHLVTDIXXXXXXXXXXXXAQERILQEIERLAAEAYSIF 63
           +E+AGE E+ S FT+ IINEI HLVT I            AQE ILQEIERLAAEAYSIF
Sbjct: 423 SEEAGENEN-SEFTNEIINEIRHLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIF 481

Query: 64  RSSVPTFSEETIMESEVSVEPTKLILPDTPLKVSSGTGTGYEILCQGFNWESHKSGRWYL 123
           R+SVPTFSEE I+ESEV ++      P+ P K+ SGTGTGYEI+CQGFNWES+KSGRWY+
Sbjct: 482 RTSVPTFSEEAIVESEVVLDSES---PELPPKIMSGTGTGYEIVCQGFNWESNKSGRWYM 538

Query: 124 ELKEKAAELMSLGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDVVKKFHEVG 183
           ELKEKA EL SLGFTVIWLPPPT+SVSPEGYMP+DLYNLNSRYGTIDELKDVVK+FH+VG
Sbjct: 539 ELKEKAKELASLGFTVIWLPPPTDSVSPEGYMPRDLYNLNSRYGTIDELKDVVKEFHKVG 598

Query: 184 IKVLG 188
           IKVLG
Sbjct: 599 IKVLG 603


>Medtr8g468990.3 | alpha amylase domain protein | HC |
           chr8:25017230-25009440 | 20130731
          Length = 764

 Score =  268 bits (684), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 136/185 (73%), Positives = 153/185 (82%), Gaps = 4/185 (2%)

Query: 4   TEKAGEEESTSAFTDGIINEISHLVTDIXXXXXXXXXXXXAQERILQEIERLAAEAYSIF 63
           +E+AGE E+ S FT+ IINEI HLVT I            AQE ILQEIERLAAEAYSIF
Sbjct: 274 SEEAGENEN-SEFTNEIINEIRHLVTGISSVKRRKTKSKEAQETILQEIERLAAEAYSIF 332

Query: 64  RSSVPTFSEETIMESEVSVEPTKLILPDTPLKVSSGTGTGYEILCQGFNWESHKSGRWYL 123
           R+SVPTFSEE I+ESEV ++      P+ P K+ SGTGTGYEI+CQGFNWES+KSGRWY+
Sbjct: 333 RTSVPTFSEEAIVESEVVLDSES---PELPPKIMSGTGTGYEIVCQGFNWESNKSGRWYM 389

Query: 124 ELKEKAAELMSLGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDVVKKFHEVG 183
           ELKEKA EL SLGFTVIWLPPPT+SVSPEGYMP+DLYNLNSRYGTIDELKDVVK+FH+VG
Sbjct: 390 ELKEKAKELASLGFTVIWLPPPTDSVSPEGYMPRDLYNLNSRYGTIDELKDVVKEFHKVG 449

Query: 184 IKVLG 188
           IKVLG
Sbjct: 450 IKVLG 454


>Medtr7g013300.1 | alpha amylase domain protein | HC |
           chr7:3837657-3823104 | 20130731
          Length = 962

 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%)

Query: 99  GTGTGYEILCQGFNWESHKSGRWYLELKEKAAELMSLGFTVIWLPPPTESVSPEGYMPKD 158
           GTGTG EI+ Q FNWES +  +WY EL  KAA+L   G T +WLPPPTESV+ +GYMP D
Sbjct: 562 GTGTGREIVFQAFNWESWRR-QWYQELASKAADLSKCGVTAVWLPPPTESVAAQGYMPSD 620

Query: 159 LYNLNSRYGTIDELKDVVKKFHEVGIKVLG 188
           LYNLNS YG+++ELK  +++ H   +  LG
Sbjct: 621 LYNLNSSYGSVEELKYCIEELHTHDLLALG 650


>Medtr7g013300.2 | alpha amylase domain protein | HC |
           chr7:3837686-3823076 | 20130731
          Length = 962

 Score =  113 bits (283), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%)

Query: 99  GTGTGYEILCQGFNWESHKSGRWYLELKEKAAELMSLGFTVIWLPPPTESVSPEGYMPKD 158
           GTGTG EI+ Q FNWES +  +WY EL  KAA+L   G T +WLPPPTESV+ +GYMP D
Sbjct: 562 GTGTGREIVFQAFNWESWRR-QWYQELASKAADLSKCGVTAVWLPPPTESVAAQGYMPSD 620

Query: 159 LYNLNSRYGTIDELKDVVKKFHEVGIKVLG 188
           LYNLNS YG+++ELK  +++ H   +  LG
Sbjct: 621 LYNLNSSYGSVEELKYCIEELHTHDLLALG 650


>Medtr1g019440.1 | alpha amylase domain protein | HC |
           chr1:5870673-5873171 | 20130731
          Length = 421

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 106 ILCQGFNWESHKSGRWYLELKEKAAELMSLGFTVIWLPPPTESVSPEGYMPKDLYNLN-S 164
           +L QGFNWES   G WY  LK    +L + G T +WLPPP++SV P+GY+P  LY+L+ S
Sbjct: 25  LLFQGFNWESSNKGGWYNSLKNLIPDLANAGITHVWLPPPSQSVGPQGYLPGRLYDLDAS 84

Query: 165 RYGTIDELKDVVKKFHEVGIKVL 187
           +YG+ D+LK ++  F + GI  L
Sbjct: 85  KYGSKDDLKSLIAAFKDKGINCL 107


>Medtr1g026170.1 | alpha amylase domain protein | HC |
           chr1:8455846-8461251 | 20130731
          Length = 432

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 1/85 (1%)

Query: 103 GYEILCQGFNWESHKSGRWYLELKEKAAELMSLGFTVIWLPPPTESVSPEGYMPKDLYNL 162
           G EIL Q FNWESHK   W+  L+ K  ++   G T  WLPPPT S SPEGY P++LY+L
Sbjct: 43  GKEILFQAFNWESHKY-DWWANLESKVPDIAKAGITSAWLPPPTHSFSPEGYTPQNLYSL 101

Query: 163 NSRYGTIDELKDVVKKFHEVGIKVL 187
           NS+YG+  +LK +++K  +  ++ +
Sbjct: 102 NSKYGSEHQLKALLQKLKQQKVRAM 126


>Medtr1g019480.1 | alpha amylase domain protein | HC |
           chr1:5884776-5886764 | 20130731
          Length = 402

 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 4/84 (4%)

Query: 106 ILCQGFNW-ESHKSGRWYLELKEKAAELMSLGFTVIWLPPPTESV--SPEGYMPKDLYNL 162
           IL QGF W  S K G W+  LK K  ++   G   +WLPPP+ S    P+GY+PK LY+L
Sbjct: 25  ILFQGFKWASSEKEGGWWNFLKTKVPDIADAGVEYVWLPPPSNSHDDGPQGYLPKRLYDL 84

Query: 163 N-SRYGTIDELKDVVKKFHEVGIK 185
           + S+YG   ELK +V  F E G+K
Sbjct: 85  DTSKYGNKQELKSLVAAFREQGVK 108