Miyakogusa Predicted Gene

Lj0g3v0147719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147719.1 Non Characterized Hit- tr|I1K0C7|I1K0C7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.88,0.003,
,CUFF.9022.1
         (65 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102820.2 | GPI transamidase subunit PIG-U | HC | chr4:426...    55   1e-08
Medtr4g102820.1 | GPI transamidase subunit PIG-U | HC | chr4:426...    55   1e-08

>Medtr4g102820.2 | GPI transamidase subunit PIG-U | HC |
           chr4:42618003-42624013 | 20130731
          Length = 478

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 30/44 (68%)

Query: 22  PCNPYYPSHIILGYGPDAPPRKLFWLRKNDKVDNSTSSNRSCLE 65
           P     P  ++ GYGPDAPPRKLF  R N +VD+S S +RSCLE
Sbjct: 212 PAILIIPVILLFGYGPDAPPRKLFRQRTNLEVDDSASGDRSCLE 255


>Medtr4g102820.1 | GPI transamidase subunit PIG-U | HC |
           chr4:42618003-42624832 | 20130731
          Length = 480

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/38 (63%), Positives = 29/38 (76%)

Query: 28  PSHIILGYGPDAPPRKLFWLRKNDKVDNSTSSNRSCLE 65
           P  ++ GYGPDAPPRKLF  R N +VD+S S +RSCLE
Sbjct: 218 PVILLFGYGPDAPPRKLFRQRTNLEVDDSASGDRSCLE 255