Miyakogusa Predicted Gene
- Lj0g3v0147509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0147509.1 tr|A4S673|A4S673_OSTLU Predicted protein
(Fragment) OS=Ostreococcus lucimarinus (strain CCE9901)
GN=,31.08,1e-18,seg,NULL; DUF179,Protein of unknown function DUF179;
no description,NULL; VC0467-like,NULL; SUBFAMIL,CUFF.9035.1
(350 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g005140.1 | electron transporter, putative | HC | chr3:786... 432 e-121
Medtr3g005140.2 | electron transporter, putative | HC | chr3:788... 432 e-121
Medtr7g011850.1 | plant/MXO21-9 protein | HC | chr7:3281753-3284... 181 1e-45
Medtr4g074610.1 | electron transporter, putative | HC | chr4:284... 69 7e-12
>Medtr3g005140.1 | electron transporter, putative | HC |
chr3:78652-81355 | 20130731
Length = 322
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/338 (65%), Positives = 247/338 (73%), Gaps = 21/338 (6%)
Query: 1 MDLCAVHVKT-LFHTKNSIFHGPISSNFGKSGISFRAVDGRDFEITVLRRCNVNRSFVVT 59
MDLC V+VK L + NS +G S+F + EIT + R +
Sbjct: 1 MDLCGVNVKNNLLYPTNSFSYGTTRSSFYNA------------EITNCKHFQRRRIPFLV 48
Query: 60 ASGKKNHDXXXXXXXXXXXXXEQSIPEGDGIRGKNSSDGDKPDNNPEKCHHTNLDWREFR 119
+ +QSIPEG +DGDK +NN +K H NLDWREFR
Sbjct: 49 VTANAGGKKKKNNNHGGGGNGDQSIPEG-------KNDGDKSNNNSDKRAHVNLDWREFR 101
Query: 120 AKLFRDELKEISDTDAH-QGGTLHNSKPLGTKWAHPIPVPETGCVLVATEKLDGVRTFER 178
AKL+RDELKEI+D D H +GG LH SKPL TKWAHPIPVPETGCVLVAT+KLDG+RTFER
Sbjct: 102 AKLYRDELKEIADADTHKEGGALHISKPLETKWAHPIPVPETGCVLVATDKLDGIRTFER 161
Query: 179 TVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPTNHDLLTTFSDCSLHFGGPLEASMF 238
TV+LLLRSGTRHPQEGPFGIVINRPLHKKIK M P NHDL+TTFSDCSLHFGGPLEASMF
Sbjct: 162 TVILLLRSGTRHPQEGPFGIVINRPLHKKIKQMNPKNHDLVTTFSDCSLHFGGPLEASMF 221
Query: 239 LLKTGEKSKLPGLEEVIPGLCFGARNSLDSAAALVKKGILRPHDCSFFVGYAGWQMDQLR 298
LLK+GEK KLPG EEV+PGL +GARN LD AA LVKKGI++PHD SFFVGYAGWQMDQLR
Sbjct: 222 LLKSGEKLKLPGFEEVVPGLYYGARNCLDDAAGLVKKGIIKPHDFSFFVGYAGWQMDQLR 281
Query: 299 DEIESNYWHVAACGSSLLCGALSDPSESLWEEILQLMG 336
DEIES YW+VAAC SSLL AL+D SE LWEEILQLMG
Sbjct: 282 DEIESEYWYVAACSSSLLYKALTDSSEGLWEEILQLMG 319
>Medtr3g005140.2 | electron transporter, putative | HC |
chr3:78869-81355 | 20130731
Length = 322
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/338 (65%), Positives = 247/338 (73%), Gaps = 21/338 (6%)
Query: 1 MDLCAVHVKT-LFHTKNSIFHGPISSNFGKSGISFRAVDGRDFEITVLRRCNVNRSFVVT 59
MDLC V+VK L + NS +G S+F + EIT + R +
Sbjct: 1 MDLCGVNVKNNLLYPTNSFSYGTTRSSFYNA------------EITNCKHFQRRRIPFLV 48
Query: 60 ASGKKNHDXXXXXXXXXXXXXEQSIPEGDGIRGKNSSDGDKPDNNPEKCHHTNLDWREFR 119
+ +QSIPEG +DGDK +NN +K H NLDWREFR
Sbjct: 49 VTANAGGKKKKNNNHGGGGNGDQSIPEG-------KNDGDKSNNNSDKRAHVNLDWREFR 101
Query: 120 AKLFRDELKEISDTDAH-QGGTLHNSKPLGTKWAHPIPVPETGCVLVATEKLDGVRTFER 178
AKL+RDELKEI+D D H +GG LH SKPL TKWAHPIPVPETGCVLVAT+KLDG+RTFER
Sbjct: 102 AKLYRDELKEIADADTHKEGGALHISKPLETKWAHPIPVPETGCVLVATDKLDGIRTFER 161
Query: 179 TVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPTNHDLLTTFSDCSLHFGGPLEASMF 238
TV+LLLRSGTRHPQEGPFGIVINRPLHKKIK M P NHDL+TTFSDCSLHFGGPLEASMF
Sbjct: 162 TVILLLRSGTRHPQEGPFGIVINRPLHKKIKQMNPKNHDLVTTFSDCSLHFGGPLEASMF 221
Query: 239 LLKTGEKSKLPGLEEVIPGLCFGARNSLDSAAALVKKGILRPHDCSFFVGYAGWQMDQLR 298
LLK+GEK KLPG EEV+PGL +GARN LD AA LVKKGI++PHD SFFVGYAGWQMDQLR
Sbjct: 222 LLKSGEKLKLPGFEEVVPGLYYGARNCLDDAAGLVKKGIIKPHDFSFFVGYAGWQMDQLR 281
Query: 299 DEIESNYWHVAACGSSLLCGALSDPSESLWEEILQLMG 336
DEIES YW+VAAC SSLL AL+D SE LWEEILQLMG
Sbjct: 282 DEIESEYWYVAACSSSLLYKALTDSSEGLWEEILQLMG 319
>Medtr7g011850.1 | plant/MXO21-9 protein | HC | chr7:3281753-3284321
| 20130731
Length = 291
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 139/236 (58%), Gaps = 20/236 (8%)
Query: 112 NLDWREFRAKLFRDE--LKEISDTDAHQGGTLHNSKPL---GTKWAHPIPVPETGCVLVA 166
N DWR FRAKL E LK + A T+ + PL G KWAH I PE GC+L+A
Sbjct: 60 NTDWRSFRAKLVAGEQLLKPEFLSSATNPDTVVDHPPLITIGDKWAHVIHEPERGCLLIA 119
Query: 167 TEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLHKKIKHMKPTNHDLLTTFSDCS 226
TEKLDGV FERTV+LLL +G GP GI++NRP IK + T D++ TFS+
Sbjct: 120 TEKLDGVHIFERTVILLLSNGPI----GPSGIILNRPSLMSIKETRSTAFDVMGTFSNSP 175
Query: 227 LHFGGPLEASMFLL--KTGEKSKLPGLEEVIPGLCFGARNSLDSAAALVKKGILRPHDCS 284
L+FGGPLE +FL+ K K +EV+ GL +G + S+ AA +VK+ ++ D
Sbjct: 176 LYFGGPLEEGLFLVSPKDDVVGKSGVFDEVMKGLYYGTKESVGLAAEMVKRNVVEVGDFR 235
Query: 285 FFVGYAGWQMDQLRDEIESNYWHVAACGSSLL----CGALSDPSESLWEEILQLMG 336
FF GY GW+ +QLRDEI YW VAAC S++ G + LW+E+L LMG
Sbjct: 236 FFDGYCGWEKEQLRDEIRDGYWTVAACSPSVVDLGNVGIV-----GLWDEVLGLMG 286
>Medtr4g074610.1 | electron transporter, putative | HC |
chr4:28424345-28418420 | 20130731
Length = 1091
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 146 PLGTKWAHPIPVPETGCVLVATEKLDGVRTFERTVVLLLRSGTRHPQEGPFGIVINRPLH 205
P+ W +P G VL+ATEKL GV F+ + +L++ + P G G++IN
Sbjct: 926 PVSNGWQETLPHVVVGSVLIATEKLLGVDPFDGSKILIVAAD---PATGFQGLIIN---- 978
Query: 206 KKIKHMKPTN-HDLLTTFSDCSLHFGGP-LEASMFLLKTGEKSKLPGLEEVIPGLCFGAR 263
KH+K TN + L + L GGP ++ M LL L E++PG+ F
Sbjct: 979 ---KHLKWTNLEEDLEKLKEAPLSLGGPVVKTGMPLLSLTRTVSGYNLPEILPGIYFLDY 1035
Query: 264 NSLDSAAALVKKGILRPHDCSFFVGYAGWQMDQLRDEIESNYWHVAACGS 313
S +K FF GY+ W+ +QL E+ W+++ G+
Sbjct: 1036 VVTTSIIQKLKYAKEPVDSYWFFFGYSNWEWNQLYHEMAEGAWNLSEDGA 1085