Miyakogusa Predicted Gene

Lj0g3v0147489.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147489.1 Non Characterized Hit- tr|D8S2F2|D8S2F2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,64.29,0.0000000000006,seg,NULL; UNCHARACTERIZED,Protein of
unknown function DUF543; DUF543,Protein of unknown function
DUF,CUFF.9009.1
         (97 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g005050.1 | DUF543 domain protein | HC | chr3:23553-15559 ...   154   2e-38
Medtr3g005050.2 | DUF543 domain protein | HC | chr3:23553-16884 ...   145   8e-36

>Medtr3g005050.1 | DUF543 domain protein | HC | chr3:23553-15559 |
          20130731
          Length = 98

 Score =  154 bits (390), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/98 (78%), Positives = 82/98 (83%), Gaps = 1/98 (1%)

Query: 1  MADNKE-IIPPQYDLDAKWDACLDLTVRRFVYSSFAGALGGLLFFRSPVTRWASIAFGAG 59
          M +NKE +IP +YD+DAKWDACLDLTVRRFVYSSFAGA GGLL FRSP TRWASIAFGAG
Sbjct: 1  MGENKEELIPQKYDVDAKWDACLDLTVRRFVYSSFAGAFGGLLLFRSPQTRWASIAFGAG 60

Query: 60 VGIGSAYTESSRLFDGPPRKLALPEVSETPIQSVQDSE 97
          VGIGSAY E SRLFDG P KLA  + SE P Q VQDSE
Sbjct: 61 VGIGSAYAECSRLFDGSPAKLAQHKDSEAPTQFVQDSE 98


>Medtr3g005050.2 | DUF543 domain protein | HC | chr3:23553-16884 |
          20130731
          Length = 99

 Score =  145 bits (366), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 72/92 (78%), Positives = 77/92 (83%), Gaps = 1/92 (1%)

Query: 1  MADNKE-IIPPQYDLDAKWDACLDLTVRRFVYSSFAGALGGLLFFRSPVTRWASIAFGAG 59
          M +NKE +IP +YD+DAKWDACLDLTVRRFVYSSFAGA GGLL FRSP TRWASIAFGAG
Sbjct: 1  MGENKEELIPQKYDVDAKWDACLDLTVRRFVYSSFAGAFGGLLLFRSPQTRWASIAFGAG 60

Query: 60 VGIGSAYTESSRLFDGPPRKLALPEVSETPIQ 91
          VGIGSAY E SRLFDG P KLA  + SE P Q
Sbjct: 61 VGIGSAYAECSRLFDGSPAKLAQHKDSEAPTQ 92