Miyakogusa Predicted Gene

Lj0g3v0147459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0147459.1 Non Characterized Hit- tr|H0ZJ82|H0ZJ82_TAEGU
Uncharacterized protein OS=Taeniopygia guttata
GN=LRRC,44.83,3e-18,seg,NULL; no description,NULL; LRR_4,Leucine rich
repeat 4; L domain-like,NULL; LEUCINE-RICH REPEAT-,CUFF.9003.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g079560.1 | LRR receptor-like kinase | HC | chr2:33501622-...   120   3e-28
Medtr2g079560.2 | LRR receptor-like kinase | HC | chr2:33501622-...   120   3e-28
Medtr2g079560.4 | LRR receptor-like kinase | HC | chr2:33501622-...   111   1e-25

>Medtr2g079560.1 | LRR receptor-like kinase | HC |
           chr2:33501622-33512140 | 20130731
          Length = 585

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 72/110 (65%), Gaps = 1/110 (0%)

Query: 1   MDRVLKAAXXXXXXXXXXXXXXEVPDEVYRNLEGLGSDD-KWWEAAELQKLVLAHNCIES 59
           MDR+LK+A              EVP EVYRNL+G+G DD KWWEA ELQKL+LAHN IE 
Sbjct: 1   MDRLLKSARSSGSLNLSNRSLSEVPVEVYRNLDGIGGDDDKWWEAVELQKLILAHNSIEL 60

Query: 60  LKEDIKNLPFXXXXXXXXXXXXXXPAAIGELPQLKMLDVSFNSIVRIPDE 109
           LKEDI+NL                PAAIGELP+LKMLDVS N IVRIP+E
Sbjct: 61  LKEDIRNLSCLVVLNLSHNSLSQLPAAIGELPELKMLDVSHNLIVRIPEE 110


>Medtr2g079560.2 | LRR receptor-like kinase | HC |
           chr2:33501622-33512140 | 20130731
          Length = 583

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 72/110 (65%), Gaps = 1/110 (0%)

Query: 1   MDRVLKAAXXXXXXXXXXXXXXEVPDEVYRNLEGLGSDD-KWWEAAELQKLVLAHNCIES 59
           MDR+LK+A              EVP EVYRNL+G+G DD KWWEA ELQKL+LAHN IE 
Sbjct: 1   MDRLLKSARSSGSLNLSNRSLSEVPVEVYRNLDGIGGDDDKWWEAVELQKLILAHNSIEL 60

Query: 60  LKEDIKNLPFXXXXXXXXXXXXXXPAAIGELPQLKMLDVSFNSIVRIPDE 109
           LKEDI+NL                PAAIGELP+LKMLDVS N IVRIP+E
Sbjct: 61  LKEDIRNLSCLVVLNLSHNSLSQLPAAIGELPELKMLDVSHNLIVRIPEE 110


>Medtr2g079560.4 | LRR receptor-like kinase | HC |
           chr2:33501622-33512140 | 20130731
          Length = 630

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/88 (65%), Positives = 64/88 (72%), Gaps = 1/88 (1%)

Query: 23  EVPDEVYRNLEGLGSDD-KWWEAAELQKLVLAHNCIESLKEDIKNLPFXXXXXXXXXXXX 81
           EVP EVYRNL+G+G DD KWWEA ELQKL+LAHN IE LKEDI+NL              
Sbjct: 70  EVPVEVYRNLDGIGGDDDKWWEAVELQKLILAHNSIELLKEDIRNLSCLVVLNLSHNSLS 129

Query: 82  XXPAAIGELPQLKMLDVSFNSIVRIPDE 109
             PAAIGELP+LKMLDVS N IVRIP+E
Sbjct: 130 QLPAAIGELPELKMLDVSHNLIVRIPEE 157